RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 FGD1P98174 961 aa15.71■□□□□ 0.11
CCDC57-205ENST00000392346 MAP3K4Q9Y6R4 1608 aa15.71■□□□□ 0.11
CCDC57-205ENST00000392346 PLEKHD1A6NEE1 506 aa15.7■□□□□ 0.1
CCDC57-205ENST00000392346 PPP4R2Q9NY27 417 aa15.7■□□□□ 0.1
CCDC57-205ENST00000392346 ABCC5O15440 1437 aa15.7■□□□□ 0.1
CCDC57-205ENST00000392346 DAPK1P53355 1430 aa15.7■□□□□ 0.1
CCDC57-205ENST00000392346 NBR1Q14596 966 aa15.69■□□□□ 0.1
CCDC57-205ENST00000392346 TCOF1Q13428 1488 aaKnown RBP15.69■□□□□ 0.1
CCDC57-205ENST00000392346 PPRC1Q5VV67 1664 aaKnown RBP15.68■□□□□ 0.1
CCDC57-205ENST00000392346 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
CCDC57-205ENST00000392346 PAK3O75914 559 aaPredicted RBP15.66■□□□□ 0.1
CCDC57-205ENST00000392346 PKD2Q13563 968 aa15.66■□□□□ 0.1
CCDC57-205ENST00000392346 TAF7LQ5H9L4 462 aa15.66■□□□□ 0.1
CCDC57-205ENST00000392346 ZBED9Q6R2W3 1325 aa15.65■□□□□ 0.1
CCDC57-205ENST00000392346 RPRD2Q5VT52 1461 aaKnown RBP15.65■□□□□ 0.1
CCDC57-205ENST00000392346 CFAP44Q96MT7 982 aa15.65■□□□□ 0.1
CCDC57-205ENST00000392346 NUP153P49790 1475 aaKnown RBP15.64■□□□□ 0.09
CCDC57-205ENST00000392346 PAXIP1Q6ZW49 1069 aaPredicted RBP15.64■□□□□ 0.09
CCDC57-205ENST00000392346 CFDP1Q9UEE9 299 aaPredicted RBP15.64■□□□□ 0.09
CCDC57-205ENST00000392346 BCORL1Q5H9F3 1711 aa15.62■□□□□ 0.09
CCDC57-205ENST00000392346 USP47Q96K76 1375 aa15.62■□□□□ 0.09
CCDC57-205ENST00000392346 FANCIQ9NVI1 1328 aa15.62■□□□□ 0.09
CCDC57-205ENST00000392346 COL17A1Q9UMD9 1497 aaPredicted RBP15.61■□□□□ 0.09
CCDC57-205ENST00000392346 SPATA31E1Q6ZUB1 1445 aa15.61■□□□□ 0.09
CCDC57-205ENST00000392346 SKAP1Q86WV1 359 aa15.61■□□□□ 0.09
CCDC57-205ENST00000392346 DHX29Q7Z478 1369 aaKnown RBP15.6■□□□□ 0.09
CCDC57-205ENST00000392346 PZPP20742 1482 aa15.59■□□□□ 0.09
CCDC57-205ENST00000392346 MIA2Q96PC5 1412 aa15.59■□□□□ 0.09
CCDC57-205ENST00000392346 ABCA9Q8IUA7 1624 aa15.57■□□□□ 0.08
CCDC57-205ENST00000392346 ST20-MTHFSA0A0A6YYL1 179 aa15.56■□□□□ 0.08
CCDC57-205ENST00000392346 CARD11Q9BXL7 1154 aa15.56■□□□□ 0.08
CCDC57-205ENST00000392346 KIF14Q15058 1648 aa15.56■□□□□ 0.08
CCDC57-205ENST00000392346 TMC1Q8TDI8 760 aa15.56■□□□□ 0.08
CCDC57-205ENST00000392346 KDM4FA0A1W2PPD8 638 aa15.55■□□□□ 0.08
CCDC57-205ENST00000392346 RGL3Q3MIN7 710 aa15.55■□□□□ 0.08
CCDC57-205ENST00000392346 DNMT1P26358 1616 aaKnown RBP15.55■□□□□ 0.08
CCDC57-205ENST00000392346 CAMSAP2Q08AD1 1489 aa15.54■□□□□ 0.08
CCDC57-205ENST00000392346 DCAF11Q8TEB1 546 aa15.54■□□□□ 0.08
CCDC57-205ENST00000392346 BRD2P25440 801 aaKnown RBP15.53■□□□□ 0.08
CCDC57-205ENST00000392346 TMEM132AQ24JP5 1023 aa15.53■□□□□ 0.08
CCDC57-205ENST00000392346 NUDCQ9Y266 331 aa15.53■□□□□ 0.08
CCDC57-205ENST00000392346 HNRNPMP52272 730 aaKnown RBP eCLIP15.52■□□□□ 0.07
CCDC57-205ENST00000392346 NEO1Q92859 1461 aa15.52■□□□□ 0.07
CCDC57-205ENST00000392346 ARAP3Q8WWN8 1544 aa15.52■□□□□ 0.07
CCDC57-205ENST00000392346 NUP155O75694 1391 aa15.51■□□□□ 0.07
CCDC57-205ENST00000392346 RAPGEF3O95398 923 aa15.51■□□□□ 0.07
CCDC57-205ENST00000392346 PNISRQ8TF01 805 aaKnown RBP15.5■□□□□ 0.07
CCDC57-205ENST00000392346 ROCK1Q13464 1354 aa15.49■□□□□ 0.07
CCDC57-205ENST00000392346 IGSF3O75054 1194 aa15.49■□□□□ 0.07
CCDC57-205ENST00000392346 DEKP35659 375 aaKnown RBP15.49■□□□□ 0.07
CCDC57-205ENST00000392346 PLIN1O60240 522 aa15.49■□□□□ 0.07
CCDC57-205ENST00000392346 EXOC6Q8TAG9 804 aa15.49■□□□□ 0.07
CCDC57-205ENST00000392346 CDCA7LQ96GN5 454 aa15.49■□□□□ 0.07
CCDC57-205ENST00000392346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCDC57-205ENST00000392346 NOP58Q9Y2X3 529 aaKnown RBP15.48■□□□□ 0.07
CCDC57-205ENST00000392346 ADGRL1O94910 1474 aa15.48■□□□□ 0.07
CCDC57-205ENST00000392346 KIAA1107Q9UPP5 1409 aa15.48■□□□□ 0.07
CCDC57-205ENST00000392346 CC2D1BQ5T0F9 858 aaKnown RBP15.48■□□□□ 0.07
CCDC57-205ENST00000392346 GPATCH8Q9UKJ3 1502 aaKnown RBP15.48■□□□□ 0.07
CCDC57-205ENST00000392346 NBPF1Q3BBV0 1214 aa15.47■□□□□ 0.07
CCDC57-205ENST00000392346 FANCAO15360 1455 aa15.47■□□□□ 0.07
CCDC57-205ENST00000392346 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.46■□□□□ 0.072e-6■■□□□ 12.3
CCDC57-205ENST00000392346 SMG6Q86US8 1419 aaKnown RBP15.46■□□□□ 0.07
CCDC57-205ENST00000392346 ANKRD50Q9ULJ7 1429 aa15.46■□□□□ 0.07
CCDC57-205ENST00000392346 MBD5Q9P267 1494 aa15.45■□□□□ 0.06
CCDC57-205ENST00000392346 EFCAB2Q5VUJ9 269 aa15.45■□□□□ 0.06
CCDC57-205ENST00000392346 PLCB2Q00722 1185 aa15.45■□□□□ 0.06
CCDC57-205ENST00000392346 TROQ12816 1431 aaPredicted RBP15.45■□□□□ 0.06
CCDC57-205ENST00000392346 ARID4BQ4LE39 1312 aaPredicted RBP15.44■□□□□ 0.06
CCDC57-205ENST00000392346 KDM5CP41229 1560 aa15.44■□□□□ 0.06
CCDC57-205ENST00000392346 CFAP74Q9C0B2 1584 aa15.44■□□□□ 0.06
CCDC57-205ENST00000392346 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.43■□□□□ 0.063e-7■■■■■ 34.1
CCDC57-205ENST00000392346 TTC37Q6PGP7 1564 aa15.42■□□□□ 0.06
CCDC57-205ENST00000392346 ERICH6BQ5W0A0 696 aa15.42■□□□□ 0.06
CCDC57-205ENST00000392346 POLR1AO95602 1720 aaPredicted RBP15.42■□□□□ 0.06
CCDC57-205ENST00000392346 PLCH2O75038 1416 aa15.42■□□□□ 0.06
CCDC57-205ENST00000392346 LAS1LQ9Y4W2 734 aaKnown RBP15.41■□□□□ 0.06
CCDC57-205ENST00000392346 ANKRD30AQ9BXX3 1397 aa15.4■□□□□ 0.06
CCDC57-205ENST00000392346 ROCK2O75116 1388 aaKnown RBP15.4■□□□□ 0.06
CCDC57-205ENST00000392346 MYT1LQ9UL68 1186 aa15.4■□□□□ 0.06
CCDC57-205ENST00000392346 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.39■□□□□ 0.05
CCDC57-205ENST00000392346 AAMPQ13685 434 aa15.38■□□□□ 0.05
CCDC57-205ENST00000392346 SCAPERQ9BY12 1400 aa15.38■□□□□ 0.05
CCDC57-205ENST00000392346 C9orf84Q5VXU9 1444 aa15.38■□□□□ 0.05
CCDC57-205ENST00000392346 RRP1P56182 461 aaKnown RBP15.37■□□□□ 0.05
CCDC57-205ENST00000392346 MYO5CQ9NQX4 1742 aa15.37■□□□□ 0.05
CCDC57-205ENST00000392346 CDK11BP21127 795 aaKnown RBP15.37■□□□□ 0.05
CCDC57-205ENST00000392346 ANP32AP39687 249 aaKnown RBP15.36■□□□□ 0.05
CCDC57-205ENST00000392346 TSPY4P0CV99 314 aa15.36■□□□□ 0.05
CCDC57-205ENST00000392346 TSPY10P0CW01 314 aa15.36■□□□□ 0.05
CCDC57-205ENST00000392346 KIF15Q9NS87 1388 aa15.36■□□□□ 0.05
CCDC57-205ENST00000392346 ARHGAP5Q13017 1502 aa15.35■□□□□ 0.05
CCDC57-205ENST00000392346 RNF123Q5XPI4 1314 aa15.35■□□□□ 0.05
CCDC57-205ENST00000392346 RCAN3Q9UKA8 241 aa15.35■□□□□ 0.05
CCDC57-205ENST00000392346 MYBBP1AQ9BQG0 1328 aaKnown RBP15.35■□□□□ 0.05
CCDC57-205ENST00000392346 C20orf194Q5TEA3 1177 aa15.34■□□□□ 0.05
CCDC57-205ENST00000392346 ADGBQ8N7X0 1667 aa15.34■□□□□ 0.05
CCDC57-205ENST00000392346 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.05
CCDC57-205ENST00000392346 IPO9Q96P70 1041 aaKnown RBP15.33■□□□□ 0.04
CCDC57-205ENST00000392346 FBXO3Q9UK99 471 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms