RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 POLR1AO95602 1720 aaPredicted RBP26.68■■□□□ 1.86
ERCC2-203ENST00000391944 RALGAPBQ86X10 1494 aa26.68■■□□□ 1.86
ERCC2-203ENST00000391944 ADGRL1O94910 1474 aa26.66■■□□□ 1.86
ERCC2-203ENST00000391944 ATP10AO60312 1499 aa26.65■■□□□ 1.86
ERCC2-203ENST00000391944 CNTLNQ9NXG0 1405 aa26.65■■□□□ 1.86
ERCC2-203ENST00000391944 INO80Q9ULG1 1556 aaPredicted RBP26.64■■□□□ 1.86
ERCC2-203ENST00000391944 SCAPERQ9BY12 1400 aa26.64■■□□□ 1.86
ERCC2-203ENST00000391944 DCAF11Q8TEB1 546 aa26.64■■□□□ 1.86
ERCC2-203ENST00000391944 USP47Q96K76 1375 aa26.64■■□□□ 1.86
ERCC2-203ENST00000391944 ATP7AQ04656 1500 aa26.63■■□□□ 1.85
ERCC2-203ENST00000391944 KDM5CP41229 1560 aa26.62■■□□□ 1.85
ERCC2-203ENST00000391944 KDM2AQ9Y2K7 1162 aa26.61■■□□□ 1.85
ERCC2-203ENST00000391944 KIF7Q2M1P5 1343 aa26.61■■□□□ 1.85
ERCC2-203ENST00000391944 DEPDC5O75140 1603 aa26.58■■□□□ 1.85
ERCC2-203ENST00000391944 CARD11Q9BXL7 1154 aa26.56■■□□□ 1.84
ERCC2-203ENST00000391944 BCORL1Q5H9F3 1711 aa26.55■■□□□ 1.84
ERCC2-203ENST00000391944 ARID4BQ4LE39 1312 aaPredicted RBP26.53■■□□□ 1.84
ERCC2-203ENST00000391944 CD109Q6YHK3 1445 aa26.53■■□□□ 1.84
ERCC2-203ENST00000391944 PRAG1Q86YV5 1406 aa26.53■■□□□ 1.84
ERCC2-203ENST00000391944 DHX29Q7Z478 1369 aaKnown RBP26.52■■□□□ 1.84
ERCC2-203ENST00000391944 A2MP01023 1474 aa26.52■■□□□ 1.84
ERCC2-203ENST00000391944 E9PCH4 1651 aa26.52■■□□□ 1.84
ERCC2-203ENST00000391944 RGL3Q3MIN7 710 aa26.51■■□□□ 1.84
ERCC2-203ENST00000391944 CFAP74Q9C0B2 1584 aa26.51■■□□□ 1.83
ERCC2-203ENST00000391944 EIF2AK4Q9P2K8 1649 aaKnown RBP26.5■■□□□ 1.83
ERCC2-203ENST00000391944 ZNF518AQ6AHZ1 1483 aa26.5■■□□□ 1.83
ERCC2-203ENST00000391944 MYT1LQ9UL68 1186 aa26.5■■□□□ 1.83
ERCC2-203ENST00000391944 TRPM1Q7Z4N2 1603 aa26.49■■□□□ 1.83
ERCC2-203ENST00000391944 VWDEQ8N2E2 1590 aa26.49■■□□□ 1.83
ERCC2-203ENST00000391944 KIDINS220Q9ULH0 1771 aa26.48■■□□□ 1.83
ERCC2-203ENST00000391944 ROCK2O75116 1388 aaKnown RBP26.47■■□□□ 1.83
ERCC2-203ENST00000391944 KANK1Q14678 1352 aa26.47■■□□□ 1.83
ERCC2-203ENST00000391944 TET3O43151 1660 aa26.47■■□□□ 1.83
ERCC2-203ENST00000391944 KIF3BO15066 747 aa26.46■■□□□ 1.83
ERCC2-203ENST00000391944 PTPRTO14522 1441 aa26.45■■□□□ 1.83
ERCC2-203ENST00000391944 PRKRIP1Q9H875 184 aaPredicted RBP26.45■■□□□ 1.82
ERCC2-203ENST00000391944 TRPM2O94759 1503 aa26.44■■□□□ 1.82
ERCC2-203ENST00000391944 PRDM15P57071 1507 aaPredicted RBP26.43■■□□□ 1.82
ERCC2-203ENST00000391944 GPRASP1Q5JY77 1395 aa26.42■■□□□ 1.82
ERCC2-203ENST00000391944 ST20-MTHFSA0A0A6YYL1 179 aa26.42■■□□□ 1.82
ERCC2-203ENST00000391944 SPHKAPQ2M3C7 1700 aa26.42■■□□□ 1.82
ERCC2-203ENST00000391944 MROH1Q8NDA8 1641 aa26.41■■□□□ 1.82
ERCC2-203ENST00000391944 POGZQ7Z3K3 1410 aa26.41■■□□□ 1.82
ERCC2-203ENST00000391944 LAMC1P11047 1609 aa26.39■■□□□ 1.81
ERCC2-203ENST00000391944 MLH3Q9UHC1 1453 aa26.38■■□□□ 1.81
ERCC2-203ENST00000391944 NBPF1Q3BBV0 1214 aa26.37■■□□□ 1.81
ERCC2-203ENST00000391944 CEP152O94986 1710 aa26.36■■□□□ 1.81
ERCC2-203ENST00000391944 NEO1Q92859 1461 aa26.36■■□□□ 1.81
ERCC2-203ENST00000391944 CLTCL1P53675 1640 aa26.34■■□□□ 1.81
ERCC2-203ENST00000391944 POLR3GLQ9BT43 218 aa26.33■■□□□ 1.81
ERCC2-203ENST00000391944 HECW2Q9P2P5 1572 aa26.33■■□□□ 1.8
ERCC2-203ENST00000391944 STAC3Q96MF2 364 aa26.32■■□□□ 1.8
ERCC2-203ENST00000391944 RNF17Q9BXT8 1623 aaKnown RBP26.31■■□□□ 1.8
ERCC2-203ENST00000391944 LMTK2Q8IWU2 1503 aa26.3■■□□□ 1.8
ERCC2-203ENST00000391944 CCDC184Q52MB2 194 aa26.3■■□□□ 1.8
ERCC2-203ENST00000391944 EFCAB6Q5THR3 1501 aa26.29■■□□□ 1.8
ERCC2-203ENST00000391944 CYB5RLQ6IPT4 315 aa26.29■■□□□ 1.8
ERCC2-203ENST00000391944 NEURL4Q96JN8 1562 aa26.28■■□□□ 1.8
ERCC2-203ENST00000391944 FRMPD1Q5SYB0 1578 aa26.27■■□□□ 1.8
ERCC2-203ENST00000391944 MADDQ8WXG6 1647 aa26.26■■□□□ 1.79
ERCC2-203ENST00000391944 MAP3K4Q9Y6R4 1608 aa26.26■■□□□ 1.79
ERCC2-203ENST00000391944 PPRC1Q5VV67 1664 aaKnown RBP26.24■■□□□ 1.79
ERCC2-203ENST00000391944 RIMBP3CA6NJZ7 1639 aa26.24■■□□□ 1.79
ERCC2-203ENST00000391944 RIMBP3BA6NNM3 1639 aa26.24■■□□□ 1.79
ERCC2-203ENST00000391944 RIMBP3Q9UFD9 1639 aa26.24■■□□□ 1.79
ERCC2-203ENST00000391944 MRS2Q9HD23 443 aa26.23■■□□□ 1.79
ERCC2-203ENST00000391944 ABCA6Q8N139 1617 aa26.23■■□□□ 1.79
ERCC2-203ENST00000391944 GLI2P10070 1586 aa26.23■■□□□ 1.79
ERCC2-203ENST00000391944 HNRNPUQ00839 825 aaKnown RBP eCLIP26.22■■□□□ 1.79
ERCC2-203ENST00000391944 RAPGEF3O95398 923 aa26.21■■□□□ 1.79
ERCC2-203ENST00000391944 TESK2Q96S53 571 aa26.21■■□□□ 1.79
ERCC2-203ENST00000391944 SUPT16HQ9Y5B9 1047 aaKnown RBP26.2■■□□□ 1.78
ERCC2-203ENST00000391944 COL17A1Q9UMD9 1497 aaPredicted RBP26.18■■□□□ 1.78
ERCC2-203ENST00000391944 RICTORQ6R327 1708 aa26.17■■□□□ 1.78
ERCC2-203ENST00000391944 KIF1BO60333 1816 aa26.17■■□□□ 1.78
ERCC2-203ENST00000391944 UGGT1Q9NYU2 1555 aa26.16■■□□□ 1.78
ERCC2-203ENST00000391944 GGT6Q6P531 493 aa26.16■■□□□ 1.78
ERCC2-203ENST00000391944 FAM9BQ8IZU0 186 aa26.14■■□□□ 1.77
ERCC2-203ENST00000391944 DIP2CQ9Y2E4 1556 aa26.13■■□□□ 1.77
ERCC2-203ENST00000391944 IQGAP1P46940 1657 aa26.13■■□□□ 1.77
ERCC2-203ENST00000391944 KIAA1210Q9ULL0 1709 aa26.12■■□□□ 1.77
ERCC2-203ENST00000391944 NPATQ14207 1427 aa26.12■■□□□ 1.77
ERCC2-203ENST00000391944 KTN1Q86UP2 1357 aaKnown RBP26.12■■□□□ 1.77
ERCC2-203ENST00000391944 DISP3Q9P2K9 1392 aa26.12■■□□□ 1.77
ERCC2-203ENST00000391944 MYOM2P54296 1465 aa26.11■■□□□ 1.77
ERCC2-203ENST00000391944 TMF1P82094 1093 aa26.11■■□□□ 1.77
ERCC2-203ENST00000391944 ABCC3O15438 1527 aa26.1■■□□□ 1.77
ERCC2-203ENST00000391944 WASHC2CQ9Y4E1 1318 aa26.09■■□□□ 1.77
ERCC2-203ENST00000391944 SCAF11Q99590 1463 aaKnown RBP26.09■■□□□ 1.77
ERCC2-203ENST00000391944 IFT172Q9UG01 1749 aa26.08■■□□□ 1.77
ERCC2-203ENST00000391944 CNGB1Q14028 1251 aaPredicted RBP26.08■■□□□ 1.76
ERCC2-203ENST00000391944 RALBP1Q15311 655 aa26.06■■□□□ 1.76
ERCC2-203ENST00000391944 DIP2BQ9P265 1576 aa26.06■■□□□ 1.76
ERCC2-203ENST00000391944 MROH2AA6NES4 1674 aa26.06■■□□□ 1.76
ERCC2-203ENST00000391944 FAM69CQ0P6D2 419 aa26.06■■□□□ 1.76
ERCC2-203ENST00000391944 ADGRB3O60242 1522 aa26.05■■□□□ 1.76
ERCC2-203ENST00000391944 PER1O15534 1290 aaPredicted RBP26.04■■□□□ 1.76
ERCC2-203ENST00000391944 CFAP65Q6ZU64 1925 aaKnown RBP26.04■■□□□ 1.76
ERCC2-203ENST00000391944 CAMSAP1Q5T5Y3 1602 aa26.03■■□□□ 1.76
ERCC2-203ENST00000391944 YEATS2Q9ULM3 1422 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms