RNA–Protein interactions for RNA: ENST00000390606.3

IGHV3-20-201, Transcript of immunoglobulin heavy variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGHV3-20, Length 415 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-20-201ENST00000390606 LMTK3Q96Q04 1460 aa33.84■■■■□ 3.01
IGHV3-20-201ENST00000390606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.84■■■■□ 3.01
IGHV3-20-201ENST00000390606 CLTCQ00610 1675 aaKnown RBP33.84■■■■□ 3.01
IGHV3-20-201ENST00000390606 EIF2AK4Q9P2K8 1649 aaKnown RBP33.83■■■■□ 3.01
IGHV3-20-201ENST00000390606 PTPRKQ15262 1439 aa33.83■■■■□ 3.01
IGHV3-20-201ENST00000390606 RNF17Q9BXT8 1623 aaKnown RBP33.81■■■■□ 3
IGHV3-20-201ENST00000390606 ERBINQ96RT1 1412 aa33.8■■■■□ 3
IGHV3-20-201ENST00000390606 FAM135AQ9P2D6 1515 aa33.79■■■■□ 3
IGHV3-20-201ENST00000390606 RRBP1Q9P2E9 1410 aaKnown RBP33.79■■■■□ 3
IGHV3-20-201ENST00000390606 KDM5DQ9BY66 1539 aa33.76■■■■□ 3
IGHV3-20-201ENST00000390606 MROH1Q8NDA8 1641 aa33.75■■■□□ 2.99
IGHV3-20-201ENST00000390606 SETD1BQ9UPS6 1966 aaKnown RBP33.74■■■□□ 2.99
IGHV3-20-201ENST00000390606 NPATQ14207 1427 aa33.73■■■□□ 2.99
IGHV3-20-201ENST00000390606 WASHC2CQ9Y4E1 1318 aa33.73■■■□□ 2.99
IGHV3-20-201ENST00000390606 PREX1Q8TCU6 1659 aa33.71■■■□□ 2.99
IGHV3-20-201ENST00000390606 ROCK1Q13464 1354 aa33.68■■■□□ 2.98
IGHV3-20-201ENST00000390606 UHRF1BP1Q6BDS2 1440 aa33.67■■■□□ 2.98
IGHV3-20-201ENST00000390606 ABCC3O15438 1527 aa33.67■■■□□ 2.98
IGHV3-20-201ENST00000390606 HSPA2P54652 639 aa33.66■■■□□ 2.98
IGHV3-20-201ENST00000390606 PRDM15P57071 1507 aaPredicted RBP33.65■■■□□ 2.98
IGHV3-20-201ENST00000390606 ITGAEP38570 1179 aa33.65■■■□□ 2.98
IGHV3-20-201ENST00000390606 ANKRD50Q9ULJ7 1429 aa33.64■■■□□ 2.98
IGHV3-20-201ENST00000390606 DEPDC5O75140 1603 aa33.64■■■□□ 2.98
IGHV3-20-201ENST00000390606 PZPP20742 1482 aa33.63■■■□□ 2.97
IGHV3-20-201ENST00000390606 ZC3H13Q5T200 1668 aaKnown RBP33.62■■■□□ 2.97
IGHV3-20-201ENST00000390606 FBXO31Q5XUX0 539 aaPredicted RBP33.59■■■□□ 2.97
IGHV3-20-201ENST00000390606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.57■■■□□ 2.96
IGHV3-20-201ENST00000390606 CEP152O94986 1710 aa33.56■■■□□ 2.96
IGHV3-20-201ENST00000390606 VWDEQ8N2E2 1590 aa33.54■■■□□ 2.96
IGHV3-20-201ENST00000390606 KANK1Q14678 1352 aa33.51■■■□□ 2.96
IGHV3-20-201ENST00000390606 CAMSAP1Q5T5Y3 1602 aa33.51■■■□□ 2.96
IGHV3-20-201ENST00000390606 MYO3AQ8NEV4 1616 aa33.51■■■□□ 2.96
IGHV3-20-201ENST00000390606 TNRQ92752 1358 aa33.5■■■□□ 2.95
IGHV3-20-201ENST00000390606 LMTK2Q8IWU2 1503 aa33.48■■■□□ 2.95
IGHV3-20-201ENST00000390606 ARHGAP31Q2M1Z3 1444 aa33.48■■■□□ 2.95
IGHV3-20-201ENST00000390606 ZNF142P52746 1687 aaPredicted RBP33.45■■■□□ 2.94
IGHV3-20-201ENST00000390606 ERVK-7P63135 1459 aa33.44■■■□□ 2.94
IGHV3-20-201ENST00000390606 SPATA31D1Q6ZQQ2 1576 aa33.44■■■□□ 2.94
IGHV3-20-201ENST00000390606 CEP170BQ9Y4F5 1589 aaPredicted RBP33.44■■■□□ 2.94
IGHV3-20-201ENST00000390606 UNC13BO14795 1591 aa33.43■■■□□ 2.94
IGHV3-20-201ENST00000390606 A2ML1A8K2U0 1454 aa33.42■■■□□ 2.94
IGHV3-20-201ENST00000390606 NAIPQ13075 1403 aa33.38■■■□□ 2.93
IGHV3-20-201ENST00000390606 NLRP1Q9C000 1473 aa33.37■■■□□ 2.93
IGHV3-20-201ENST00000390606 STRCQ7RTU9 1775 aa33.37■■■□□ 2.93
IGHV3-20-201ENST00000390606 EFCAB6Q5THR3 1501 aa33.35■■■□□ 2.93
IGHV3-20-201ENST00000390606 CFAP65Q6ZU64 1925 aaKnown RBP33.34■■■□□ 2.93
IGHV3-20-201ENST00000390606 HFM1A2PYH4 1435 aa33.32■■■□□ 2.92
IGHV3-20-201ENST00000390606 PLA2R1Q13018 1463 aa33.31■■■□□ 2.92
IGHV3-20-201ENST00000390606 GCC2Q8IWJ2 1684 aa33.3■■■□□ 2.92
IGHV3-20-201ENST00000390606 TET3O43151 1660 aa33.29■■■□□ 2.92
IGHV3-20-201ENST00000390606 NUP155O75694 1391 aa33.28■■■□□ 2.92
IGHV3-20-201ENST00000390606 IQGAP3Q86VI3 1631 aa33.28■■■□□ 2.92
IGHV3-20-201ENST00000390606 NOS1P29475 1434 aa33.27■■■□□ 2.92
IGHV3-20-201ENST00000390606 RPRD2Q5VT52 1461 aaKnown RBP33.25■■■□□ 2.91
IGHV3-20-201ENST00000390606 UGGT1Q9NYU2 1555 aa33.25■■■□□ 2.91
IGHV3-20-201ENST00000390606 DMRT2Q9Y5R5 561 aa33.23■■■□□ 2.91
IGHV3-20-201ENST00000390606 NCKAP5LQ9HCH0 1330 aa33.22■■■□□ 2.91
IGHV3-20-201ENST00000390606 PTPRTO14522 1441 aa33.21■■■□□ 2.91
IGHV3-20-201ENST00000390606 SYNMO15061 1565 aa33.21■■■□□ 2.91
IGHV3-20-201ENST00000390606 THEMISQ8N1K5 641 aaPredicted RBP33.2■■■□□ 2.91
IGHV3-20-201ENST00000390606 PKD2Q13563 968 aa33.19■■■□□ 2.9
IGHV3-20-201ENST00000390606 E9PCH4 1651 aa33.17■■■□□ 2.9
IGHV3-20-201ENST00000390606 IDI1Q13907 227 aa33.15■■■□□ 2.9
IGHV3-20-201ENST00000390606 UBR1Q8IWV7 1749 aa33.14■■■□□ 2.89
IGHV3-20-201ENST00000390606 PIK3C2BO00750 1634 aa33.12■■■□□ 2.89
IGHV3-20-201ENST00000390606 SLC52A1Q9NWF4 448 aa33.1■■■□□ 2.89
IGHV3-20-201ENST00000390606 ANKLE2Q86XL3 938 aa33.09■■■□□ 2.89
IGHV3-20-201ENST00000390606 NEURL4Q96JN8 1562 aa33.08■■■□□ 2.89
IGHV3-20-201ENST00000390606 POLR1AO95602 1720 aaPredicted RBP33.05■■■□□ 2.88
IGHV3-20-201ENST00000390606 TRIM52Q96A61 297 aa33.05■■■□□ 2.88
IGHV3-20-201ENST00000390606 ARHGAP23Q9P227 1491 aa33.05■■■□□ 2.88
IGHV3-20-201ENST00000390606 KDM5AP29375 1690 aaKnown RBP33.04■■■□□ 2.88
IGHV3-20-201ENST00000390606 SLIT1O75093 1534 aa33.03■■■□□ 2.88
IGHV3-20-201ENST00000390606 MED14O60244 1454 aa33.01■■■□□ 2.88
IGHV3-20-201ENST00000390606 STAG3Q9UJ98 1225 aa33.01■■■□□ 2.87
IGHV3-20-201ENST00000390606 ADGRB3O60242 1522 aa33.01■■■□□ 2.87
IGHV3-20-201ENST00000390606 TMEM2Q9UHN6 1383 aa32.99■■■□□ 2.87
IGHV3-20-201ENST00000390606 SETD5Q9C0A6 1442 aa32.99■■■□□ 2.87
IGHV3-20-201ENST00000390606 LTKP29376 864 aa32.97■■■□□ 2.87
IGHV3-20-201ENST00000390606 NPHP4O75161 1426 aaPredicted RBP32.96■■■□□ 2.87
IGHV3-20-201ENST00000390606 SCAF11Q99590 1463 aaKnown RBP32.96■■■□□ 2.87
IGHV3-20-201ENST00000390606 TXNDC2Q86VQ3 553 aa32.94■■■□□ 2.86
IGHV3-20-201ENST00000390606 SLC4A1APQ9BWU0 796 aaKnown RBP32.94■■■□□ 2.86
IGHV3-20-201ENST00000390606 SPHKAPQ2M3C7 1700 aa32.93■■■□□ 2.86
IGHV3-20-201ENST00000390606 TMEM131LA2VDJ0 1609 aa32.91■■■□□ 2.86
IGHV3-20-201ENST00000390606 LTBP4Q8N2S1 1624 aa32.91■■■□□ 2.86
IGHV3-20-201ENST00000390606 ZNF335Q9H4Z2 1342 aaPredicted RBP32.9■■■□□ 2.86
IGHV3-20-201ENST00000390606 IQGAP1P46940 1657 aa32.89■■■□□ 2.86
IGHV3-20-201ENST00000390606 RAB3GAP2Q9H2M9 1393 aa32.89■■■□□ 2.86
IGHV3-20-201ENST00000390606 CERKQ8TCT0 537 aa32.89■■■□□ 2.86
IGHV3-20-201ENST00000390606 EID1Q9Y6B2 187 aa32.89■■■□□ 2.86
IGHV3-20-201ENST00000390606 TRPM2O94759 1503 aa32.86■■■□□ 2.85
IGHV3-20-201ENST00000390606 MYO5BQ9ULV0 1848 aa32.86■■■□□ 2.85
IGHV3-20-201ENST00000390606 ACIN1Q9UKV3 1341 aaKnown RBP32.85■■■□□ 2.85
IGHV3-20-201ENST00000390606 CHGAP10645 457 aaKnown RBP32.85■■■□□ 2.85
IGHV3-20-201ENST00000390606 ZFYVE9O95405 1425 aa32.85■■■□□ 2.85
IGHV3-20-201ENST00000390606 MPHOSPH9Q99550 1183 aa32.84■■■□□ 2.85
IGHV3-20-201ENST00000390606 RIMS2Q9UQ26 1411 aa32.8■■■□□ 2.84
IGHV3-20-201ENST00000390606 CLTCL1P53675 1640 aa32.8■■■□□ 2.84
IGHV3-20-201ENST00000390606 FOXD1Q16676 465 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms