RNA–Protein interactions for RNA: ENST00000389231.9

USP5-202, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP5, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-202ENST00000389231 CCDC141Q6ZP82 1450 aa16.24■□□□□ 0.19
USP5-202ENST00000389231 SENP3-EIF4A1A0A087X0R7 540 aa16.22■□□□□ 0.19
USP5-202ENST00000389231 FAM135AQ9P2D6 1515 aa16.21■□□□□ 0.18
USP5-202ENST00000389231 SAMD9LQ8IVG5 1584 aa16.21■□□□□ 0.18
USP5-202ENST00000389231 RNF123Q5XPI4 1314 aa16.2■□□□□ 0.18
USP5-202ENST00000389231 RGL3Q3MIN7 710 aa16.2■□□□□ 0.18
USP5-202ENST00000389231 RALBP1Q15311 655 aa16.2■□□□□ 0.18
USP5-202ENST00000389231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.19■□□□□ 0.184e-6■■■□□ 16.8
USP5-202ENST00000389231 CCDC144AA2RUR9 1427 aa16.19■□□□□ 0.18
USP5-202ENST00000389231 MYBBP1AQ9BQG0 1328 aaKnown RBP16.18■□□□□ 0.18
USP5-202ENST00000389231 NBPF1Q3BBV0 1214 aa16.18■□□□□ 0.18
USP5-202ENST00000389231 BRD4O60885 1362 aaPredicted RBP16.17■□□□□ 0.18
USP5-202ENST00000389231 KTN1Q86UP2 1357 aaKnown RBP16.17■□□□□ 0.18
USP5-202ENST00000389231 PRAG1Q86YV5 1406 aa16.17■□□□□ 0.18
USP5-202ENST00000389231 LRPPRCP42704 1394 aaKnown RBP16.17■□□□□ 0.18
USP5-202ENST00000389231 PLA2R1Q13018 1463 aa16.16■□□□□ 0.18
USP5-202ENST00000389231 CDC42BPBQ9Y5S2 1711 aa16.16■□□□□ 0.18
USP5-202ENST00000389231 PREX2Q70Z35 1606 aa16.15■□□□□ 0.18
USP5-202ENST00000389231 SYCP2Q9BX26 1530 aa16.14■□□□□ 0.17
USP5-202ENST00000389231 ARHGAP5Q13017 1502 aa16.13■□□□□ 0.17
USP5-202ENST00000389231 MYT1LQ9UL68 1186 aa16.13■□□□□ 0.17
USP5-202ENST00000389231 PER1O15534 1290 aaPredicted RBP16.12■□□□□ 0.17
USP5-202ENST00000389231 GPRASP1Q5JY77 1395 aa16.12■□□□□ 0.17
USP5-202ENST00000389231 PLEKHH2Q8IVE3 1493 aa16.11■□□□□ 0.17
USP5-202ENST00000389231 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.11■□□□□ 0.175e-6■■■■□ 19.7
USP5-202ENST00000389231 NLRP13Q86W25 1043 aa16.11■□□□□ 0.17
USP5-202ENST00000389231 CCDC136Q96JN2 1154 aa16.1■□□□□ 0.17
USP5-202ENST00000389231 A2MP01023 1474 aa16.1■□□□□ 0.17
USP5-202ENST00000389231 TESK2Q96S53 571 aa16.1■□□□□ 0.17
USP5-202ENST00000389231 TTC37Q6PGP7 1564 aa16.09■□□□□ 0.17
USP5-202ENST00000389231 NOP58Q9Y2X3 529 aaKnown RBP16.09■□□□□ 0.17
USP5-202ENST00000389231 MAST1Q9Y2H9 1570 aa16.09■□□□□ 0.17
USP5-202ENST00000389231 PARD3Q8TEW0 1356 aa16.09■□□□□ 0.17
USP5-202ENST00000389231 DEKP35659 375 aaKnown RBP16.08■□□□□ 0.16
USP5-202ENST00000389231 TRPM1Q7Z4N2 1603 aa16.07■□□□□ 0.16
USP5-202ENST00000389231 UNC13BO14795 1591 aa16.07■□□□□ 0.16
USP5-202ENST00000389231 DISP3Q9P2K9 1392 aa16.06■□□□□ 0.16
USP5-202ENST00000389231 SALL2Q9Y467 1007 aaPredicted RBP16.05■□□□□ 0.16
USP5-202ENST00000389231 E9PCH4 1651 aa16.05■□□□□ 0.16
USP5-202ENST00000389231 WASHC2CQ9Y4E1 1318 aa16.05■□□□□ 0.16
USP5-202ENST00000389231 NBR1Q14596 966 aa16.05■□□□□ 0.16
USP5-202ENST00000389231 ABCC2Q92887 1545 aa16.04■□□□□ 0.16
USP5-202ENST00000389231 PAK3O75914 559 aaPredicted RBP16.04■□□□□ 0.16
USP5-202ENST00000389231 EFCAB2Q5VUJ9 269 aa16.04■□□□□ 0.16
USP5-202ENST00000389231 PANK3Q9H999 370 aa16.04■□□□□ 0.16
USP5-202ENST00000389231 CC2D1BQ5T0F9 858 aaKnown RBP16.04■□□□□ 0.16
USP5-202ENST00000389231 ATP10AO60312 1499 aa16.04■□□□□ 0.16
USP5-202ENST00000389231 ERCC6L2Q5T890 1561 aa16.03■□□□□ 0.16
USP5-202ENST00000389231 COL17A1Q9UMD9 1497 aaPredicted RBP16.03■□□□□ 0.16
USP5-202ENST00000389231 PLCH2O75038 1416 aa16.03■□□□□ 0.16
USP5-202ENST00000389231 DUOX2Q9NRD8 1548 aa16.03■□□□□ 0.16
USP5-202ENST00000389231 SHROOM2Q13796 1616 aa16.03■□□□□ 0.16
USP5-202ENST00000389231 TMF1P82094 1093 aa16.03■□□□□ 0.16
USP5-202ENST00000389231 PLXNC1O60486 1568 aa16.02■□□□□ 0.16
USP5-202ENST00000389231 RRP1P56182 461 aaKnown RBP16.02■□□□□ 0.16
USP5-202ENST00000389231 ERBINQ96RT1 1412 aa16.02■□□□□ 0.15
USP5-202ENST00000389231 IQGAP3Q86VI3 1631 aa16.02■□□□□ 0.15
USP5-202ENST00000389231 PDE3BQ13370 1112 aa16.02■□□□□ 0.15
USP5-202ENST00000389231 RCAN3Q9UKA8 241 aa16.02■□□□□ 0.15
USP5-202ENST00000389231 CHD1O14646 1710 aa16.01■□□□□ 0.15
USP5-202ENST00000389231 PRDM15P57071 1507 aaPredicted RBP16.01■□□□□ 0.15
USP5-202ENST00000389231 ANP32AP39687 249 aaKnown RBP16■□□□□ 0.15
USP5-202ENST00000389231 MAGI2Q86UL8 1455 aa16■□□□□ 0.15
USP5-202ENST00000389231 TRAPPC8Q9Y2L5 1435 aa15.98■□□□□ 0.15
USP5-202ENST00000389231 EXOC6Q8TAG9 804 aa15.98■□□□□ 0.15
USP5-202ENST00000389231 CDCA7LQ96GN5 454 aa15.98■□□□□ 0.15
USP5-202ENST00000389231 LAMC1P11047 1609 aa15.97■□□□□ 0.15
USP5-202ENST00000389231 MYO5CQ9NQX4 1742 aa15.97■□□□□ 0.15
USP5-202ENST00000389231 IPO9Q96P70 1041 aaKnown RBP15.97■□□□□ 0.15
USP5-202ENST00000389231 AFAP1Q8N556 730 aa15.96■□□□□ 0.15
USP5-202ENST00000389231 SPAG9O60271 1321 aaKnown RBP15.95■□□□□ 0.14
USP5-202ENST00000389231 ZBTB47Q9UFB7 747 aaPredicted RBP15.95■□□□□ 0.14
USP5-202ENST00000389231 EIF2AK4Q9P2K8 1649 aaKnown RBP15.95■□□□□ 0.14
USP5-202ENST00000389231 INSRP06213 1382 aa15.94■□□□□ 0.14
USP5-202ENST00000389231 ABCC1P33527 1531 aa15.92■□□□□ 0.14
USP5-202ENST00000389231 BLMP54132 1417 aaPredicted RBP15.92■□□□□ 0.14
USP5-202ENST00000389231 UHRF1BP1LA0JNW5 1464 aa15.91■□□□□ 0.14
USP5-202ENST00000389231 KNSTRNQ9Y448 316 aa15.91■□□□□ 0.14
USP5-202ENST00000389231 RTL5Q5HYW3 569 aaPredicted RBP15.9■□□□□ 0.14
USP5-202ENST00000389231 ADAMTS8Q9UP79 889 aa15.9■□□□□ 0.14
USP5-202ENST00000389231 STAC3Q96MF2 364 aa15.9■□□□□ 0.14
USP5-202ENST00000389231 RTEL1-TNFRSF6BF6WH68 1400 aa15.9■□□□□ 0.14
USP5-202ENST00000389231 ZCCHC11Q5TAX3 1644 aaKnown RBP15.89■□□□□ 0.13
USP5-202ENST00000389231 WDR7Q9Y4E6 1490 aa15.89■□□□□ 0.13
USP5-202ENST00000389231 ZMYM4Q5VZL5 1548 aa15.89■□□□□ 0.13
USP5-202ENST00000389231 PLIN1O60240 522 aa15.88■□□□□ 0.13
USP5-202ENST00000389231 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
USP5-202ENST00000389231 PTPRTO14522 1441 aa15.88■□□□□ 0.13
USP5-202ENST00000389231 PPP2R1AP30153 589 aa15.88■□□□□ 0.13
USP5-202ENST00000389231 CDCA8Q53HL2 280 aa15.87■□□□□ 0.13
USP5-202ENST00000389231 NPM2Q86SE8 214 aaKnown RBP15.86■□□□□ 0.13
USP5-202ENST00000389231 RNF17Q9BXT8 1623 aaKnown RBP15.86■□□□□ 0.13
USP5-202ENST00000389231 TCERG1O14776 1098 aaKnown RBP15.86■□□□□ 0.13
USP5-202ENST00000389231 SCAF11Q99590 1463 aaKnown RBP15.85■□□□□ 0.13
USP5-202ENST00000389231 TRPM2O94759 1503 aa15.85■□□□□ 0.13
USP5-202ENST00000389231 SCAPERQ9BY12 1400 aa15.84■□□□□ 0.13
USP5-202ENST00000389231 MADDQ8WXG6 1647 aa15.84■□□□□ 0.13
USP5-202ENST00000389231 CLASP1Q7Z460 1538 aa15.84■□□□□ 0.13
USP5-202ENST00000389231 KIF3BO15066 747 aa15.83■□□□□ 0.12
USP5-202ENST00000389231 WDR43Q15061 677 aaKnown RBP eCLIP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms