RNA–Protein interactions for RNA: ENST00000389231.9

USP5-202, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP5, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-202ENST00000389231 NISCHQ9Y2I1 1504 aa24.74■■□□□ 1.55
USP5-202ENST00000389231 SHROOM4Q9ULL8 1493 aa21.14■□□□□ 0.97
USP5-202ENST00000389231 ZCCHC6Q5VYS8 1495 aaKnown RBP20.92■□□□□ 0.94
USP5-202ENST00000389231 CCDC180Q9P1Z9 1646 aa20.92■□□□□ 0.94
USP5-202ENST00000389231 SUPT5HO00267 1087 aaKnown RBP20.79■□□□□ 0.92
USP5-202ENST00000389231 DCAF8L2P0C7V8 631 aa20.57■□□□□ 0.88
USP5-202ENST00000389231 DCAF1Q9Y4B6 1507 aa20.3■□□□□ 0.84
USP5-202ENST00000389231 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
USP5-202ENST00000389231 MYO15BQ96JP2 1530 aa20.1■□□□□ 0.81
USP5-202ENST00000389231 HRCP23327 699 aa19.77■□□□□ 0.76
USP5-202ENST00000389231 ABCC9O60706 1549 aa19.7■□□□□ 0.74
USP5-202ENST00000389231 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
USP5-202ENST00000389231 LOC105371045A0A1W2PR82 267 aa19.65■□□□□ 0.74
USP5-202ENST00000389231 PCGF6Q9BYE7 350 aa19.64■□□□□ 0.73
USP5-202ENST00000389231 RSF1Q96T23 1441 aaPredicted RBP19.63■□□□□ 0.73
USP5-202ENST00000389231 NACADO15069 1562 aa19.4■□□□□ 0.7
USP5-202ENST00000389231 PPARGC1BQ86YN6 1023 aaKnown RBP19.37■□□□□ 0.69
USP5-202ENST00000389231 TRIM41Q8WV44 630 aa19.37■□□□□ 0.69
USP5-202ENST00000389231 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
USP5-202ENST00000389231 CECR2Q9BXF3 1484 aa19.31■□□□□ 0.68
USP5-202ENST00000389231 TRIM26Q12899 539 aaPredicted RBP19.27■□□□□ 0.68
USP5-202ENST00000389231 MROH2BQ7Z745 1585 aa19.24■□□□□ 0.67
USP5-202ENST00000389231 FAM9AQ8IZU1 332 aaPredicted RBP19.2■□□□□ 0.66
USP5-202ENST00000389231 WIZO95785 1651 aa19.08■□□□□ 0.65
USP5-202ENST00000389231 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.63
USP5-202ENST00000389231 BAZ1AQ9NRL2 1556 aaPredicted RBP18.97■□□□□ 0.63
USP5-202ENST00000389231 ZEB1P37275 1124 aaPredicted RBP18.86■□□□□ 0.61
USP5-202ENST00000389231 EIF4G1Q04637 1599 aaKnown RBP18.83■□□□□ 0.61
USP5-202ENST00000389231 TOP2AP11388 1531 aaKnown RBP18.81■□□□□ 0.6
USP5-202ENST00000389231 SMARCA4P51532 1647 aa18.78■□□□□ 0.6
USP5-202ENST00000389231 CCDC88BA6NC98 1476 aa18.78■□□□□ 0.6
USP5-202ENST00000389231 SMARCA2P51531 1590 aa18.7■□□□□ 0.58
USP5-202ENST00000389231 ABCC8Q09428 1581 aa18.69■□□□□ 0.58
USP5-202ENST00000389231 UNC13AQ9UPW8 1703 aa18.67■□□□□ 0.58
USP5-202ENST00000389231 PABPN1Q86U42 306 aaKnown RBP eCLIP18.66■□□□□ 0.58
USP5-202ENST00000389231 SOGA1O94964 1423 aa18.59■□□□□ 0.57
USP5-202ENST00000389231 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
USP5-202ENST00000389231 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
USP5-202ENST00000389231 WRNQ14191 1432 aaPredicted RBP eCLIP18.5■□□□□ 0.55
USP5-202ENST00000389231 CEP162Q5TB80 1403 aa18.5■□□□□ 0.55
USP5-202ENST00000389231 TNIKQ9UKE5 1360 aa18.5■□□□□ 0.55
USP5-202ENST00000389231 EEA1Q15075 1411 aa18.49■□□□□ 0.55
USP5-202ENST00000389231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
USP5-202ENST00000389231 RUSC2Q8N2Y8 1516 aa18.48■□□□□ 0.55
USP5-202ENST00000389231 PELP1Q8IZL8 1130 aaKnown RBP18.46■□□□□ 0.54
USP5-202ENST00000389231 SCAF1Q9H7N4 1312 aaKnown RBP18.45■□□□□ 0.54
USP5-202ENST00000389231 PEG3Q9GZU2 1588 aa18.44■□□□□ 0.54
USP5-202ENST00000389231 UBTFP17480 764 aaKnown RBP18.44■□□□□ 0.54
USP5-202ENST00000389231 CCER1Q8TC90 406 aaPredicted RBP18.43■□□□□ 0.54
USP5-202ENST00000389231 TTBK1Q5TCY1 1321 aaPredicted RBP18.41■□□□□ 0.54
USP5-202ENST00000389231 ATAD2BQ9ULI0 1458 aa18.36■□□□□ 0.53
USP5-202ENST00000389231 GOLGA3Q08378 1498 aa18.35■□□□□ 0.53
USP5-202ENST00000389231 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
USP5-202ENST00000389231 SYNJ1O43426 1573 aa18.27■□□□□ 0.52
USP5-202ENST00000389231 CEP164Q9UPV0 1460 aa18.25■□□□□ 0.51
USP5-202ENST00000389231 KIF21BO75037 1637 aa18.17■□□□□ 0.5
USP5-202ENST00000389231 ACIN1Q9UKV3 1341 aaKnown RBP18.17■□□□□ 0.5
USP5-202ENST00000389231 CLIP1P30622 1438 aa18.16■□□□□ 0.5
USP5-202ENST00000389231 NEUROD1Q13562 356 aa18.12■□□□□ 0.49
USP5-202ENST00000389231 RAPGEF2Q9Y4G8 1499 aa18.11■□□□□ 0.49
USP5-202ENST00000389231 DIEXFQ68CQ4 756 aaKnown RBP18.1■□□□□ 0.49
USP5-202ENST00000389231 VPS8Q8N3P4 1428 aa18.08■□□□□ 0.48
USP5-202ENST00000389231 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
USP5-202ENST00000389231 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
USP5-202ENST00000389231 RANGAP1P46060 587 aaPredicted RBP18.04■□□□□ 0.48
USP5-202ENST00000389231 CENPBP07199 599 aaPredicted RBP18.03■□□□□ 0.48
USP5-202ENST00000389231 APLP2Q06481 763 aa18.03■□□□□ 0.48
USP5-202ENST00000389231 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
USP5-202ENST00000389231 GTF3C3Q9Y5Q9 886 aa18■□□□□ 0.47
USP5-202ENST00000389231 ZNF316A6NFI3 1004 aaPredicted RBP17.96■□□□□ 0.47
USP5-202ENST00000389231 BIVM-ERCC5R4GMW8 1640 aa17.95■□□□□ 0.46
USP5-202ENST00000389231 PRXQ9BXM0 1461 aa17.95■□□□□ 0.46
USP5-202ENST00000389231 HMGXB3Q12766 1538 aa17.95■□□□□ 0.46
USP5-202ENST00000389231 ERICH3Q5RHP9 1530 aa17.9■□□□□ 0.46
USP5-202ENST00000389231 CUX1P39880 1505 aa17.89■□□□□ 0.46
USP5-202ENST00000389231 CFTRP13569 1480 aa17.87■□□□□ 0.45
USP5-202ENST00000389231 KIF27Q86VH2 1401 aa17.86■□□□□ 0.45
USP5-202ENST00000389231 ARAP1Q96P48 1450 aa17.84■□□□□ 0.45
USP5-202ENST00000389231 KANK4Q5T7N3 995 aaPredicted RBP17.81■□□□□ 0.44
USP5-202ENST00000389231 YTHDC1Q96MU7 727 aaKnown RBP17.76■□□□□ 0.43
USP5-202ENST00000389231 MIER1Q8N108 512 aa17.7■□□□□ 0.42
USP5-202ENST00000389231 CLSPNQ9HAW4 1339 aa17.7■□□□□ 0.42
USP5-202ENST00000389231 IGF1RP08069 1367 aa17.7■□□□□ 0.42
USP5-202ENST00000389231 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
USP5-202ENST00000389231 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
USP5-202ENST00000389231 CADPSQ9ULU8 1353 aa17.69■□□□□ 0.42
USP5-202ENST00000389231 RRBP1Q9P2E9 1410 aaKnown RBP17.67■□□□□ 0.42
USP5-202ENST00000389231 CUX2O14529 1486 aa17.67■□□□□ 0.42
USP5-202ENST00000389231 CCNB3Q8WWL7 1395 aa17.61■□□□□ 0.41
USP5-202ENST00000389231 MYT1Q01538 1121 aa17.61■□□□□ 0.41
USP5-202ENST00000389231 CARMIL1Q5VZK9 1371 aa17.61■□□□□ 0.41
USP5-202ENST00000389231 FGD5Q6ZNL6 1462 aa17.57■□□□□ 0.4
USP5-202ENST00000389231 ITGAEP38570 1179 aa17.55■□□□□ 0.4
USP5-202ENST00000389231 PRDM2Q13029 1718 aa17.54■□□□□ 0.4
USP5-202ENST00000389231 MAP3K1Q13233 1512 aa17.49■□□□□ 0.39
USP5-202ENST00000389231 FANCD2Q9BXW9 1451 aa17.48■□□□□ 0.39
USP5-202ENST00000389231 TIAM1Q13009 1591 aa17.46■□□□□ 0.39
USP5-202ENST00000389231 CC2D2AQ9P2K1 1620 aa17.46■□□□□ 0.39
USP5-202ENST00000389231 P3H3Q8IVL6 736 aa17.46■□□□□ 0.38
USP5-202ENST00000389231 RAB3GAP2Q9H2M9 1393 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms