RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 DRC7Q8IY82 874 aa10.01□□□□□ -0.81
NCBP3-201ENST00000389005 LRRC9Q6ZRR7 1453 aa10□□□□□ -0.81
NCBP3-201ENST00000389005 ARID3AQ99856 593 aa10□□□□□ -0.81
NCBP3-201ENST00000389005 MYOM3Q5VTT5 1437 aa10□□□□□ -0.81
NCBP3-201ENST00000389005 FOXD4L1Q9NU39 408 aa10□□□□□ -0.81
NCBP3-201ENST00000389005 NAP1L2Q9ULW6 460 aaPredicted RBP10□□□□□ -0.81
NCBP3-201ENST00000389005 RRP7AQ9Y3A4 280 aaKnown RBP10□□□□□ -0.81
NCBP3-201ENST00000389005 IGF1RP08069 1367 aa10□□□□□ -0.81
NCBP3-201ENST00000389005 HSP90AA2PQ14568 343 aaPredicted RBP9.99□□□□□ -0.81
NCBP3-201ENST00000389005 GGT6Q6P531 493 aa9.99□□□□□ -0.81
NCBP3-201ENST00000389005 A0A0G2JS52 829 aa9.99□□□□□ -0.81
NCBP3-201ENST00000389005 RTF1Q92541 710 aaKnown RBP9.99□□□□□ -0.81
NCBP3-201ENST00000389005 SOX12O15370 315 aa9.99□□□□□ -0.81
NCBP3-201ENST00000389005 COG6Q9Y2V7 657 aa9.98□□□□□ -0.81
NCBP3-201ENST00000389005 BCL2L13Q9BXK5 485 aa9.98□□□□□ -0.81
NCBP3-201ENST00000389005 ARAP1Q96P48 1450 aa9.98□□□□□ -0.81
NCBP3-201ENST00000389005 CUX1P39880 1505 aa9.97□□□□□ -0.81
NCBP3-201ENST00000389005 HMMRO75330 724 aa9.97□□□□□ -0.81
NCBP3-201ENST00000389005 ZKSCAN2Q63HK3 967 aa9.97□□□□□ -0.81
NCBP3-201ENST00000389005 TAOK2Q9UL54 1235 aa9.97□□□□□ -0.81
NCBP3-201ENST00000389005 APAF1O14727 1248 aa9.97□□□□□ -0.81
NCBP3-201ENST00000389005 TERF2IPQ9NYB0 399 aa9.96□□□□□ -0.81
NCBP3-201ENST00000389005 ST18O60284 1047 aa9.96□□□□□ -0.81
NCBP3-201ENST00000389005 ERICH3Q5RHP9 1530 aa9.96□□□□□ -0.81
NCBP3-201ENST00000389005 NFKBIBQ15653 356 aa9.96□□□□□ -0.82
NCBP3-201ENST00000389005 BRD4O60885 1362 aaPredicted RBP9.95□□□□□ -0.82
NCBP3-201ENST00000389005 KIF3BO15066 747 aa9.95□□□□□ -0.82
NCBP3-201ENST00000389005 NGEFQ8N5V2 710 aa9.95□□□□□ -0.82
NCBP3-201ENST00000389005 LMOD2Q6P5Q4 547 aa9.95□□□□□ -0.82
NCBP3-201ENST00000389005 SKOR2Q2VWA4 1001 aaPredicted RBP9.95□□□□□ -0.82
NCBP3-201ENST00000389005 SPAG9O60271 1321 aaKnown RBP9.94□□□□□ -0.82
NCBP3-201ENST00000389005 STK31Q9BXU1 1019 aa9.94□□□□□ -0.82
NCBP3-201ENST00000389005 DDX49Q9Y6V7 483 aaKnown RBP9.94□□□□□ -0.82
NCBP3-201ENST00000389005 CASKIN1Q8WXD9 1431 aa9.94□□□□□ -0.82
NCBP3-201ENST00000389005 LMOD3Q0VAK6 560 aa9.93□□□□□ -0.82
NCBP3-201ENST00000389005 FGD5Q6ZNL6 1462 aa9.93□□□□□ -0.82
NCBP3-201ENST00000389005 TRIM6-TRIM34B2RNG4 842 aa9.93□□□□□ -0.82
NCBP3-201ENST00000389005 PHF14O94880 888 aa9.93□□□□□ -0.82
NCBP3-201ENST00000389005 PAK3O75914 559 aaPredicted RBP9.93□□□□□ -0.82
NCBP3-201ENST00000389005 FANCD2Q9BXW9 1451 aa9.93□□□□□ -0.82
NCBP3-201ENST00000389005 CHMP5Q9NZZ3 219 aa9.92□□□□□ -0.82
NCBP3-201ENST00000389005 HDGFP51858 240 aaKnown RBP9.92□□□□□ -0.82
NCBP3-201ENST00000389005 TRAK1Q9UPV9 953 aa9.92□□□□□ -0.82
NCBP3-201ENST00000389005 WDR97A6NE52 1622 aa9.92□□□□□ -0.82
NCBP3-201ENST00000389005 SYNJ1O43426 1573 aa9.92□□□□□ -0.82
NCBP3-201ENST00000389005 NOL8Q76FK4 1167 aaKnown RBP9.92□□□□□ -0.82
NCBP3-201ENST00000389005 HTATSF1O43719 755 aaKnown RBP9.91□□□□□ -0.82
NCBP3-201ENST00000389005 ANKRD45Q5TZF3 282 aa9.91□□□□□ -0.82
NCBP3-201ENST00000389005 FOXD4L5Q5VV16 416 aaPredicted RBP9.91□□□□□ -0.82
NCBP3-201ENST00000389005 FOXD4L4Q8WXT5 416 aaPredicted RBP9.91□□□□□ -0.82
NCBP3-201ENST00000389005 MIA2Q96PC5 1412 aa9.91□□□□□ -0.82
NCBP3-201ENST00000389005 NCOA2Q15596 1464 aa9.91□□□□□ -0.82
NCBP3-201ENST00000389005 JPH4Q96JJ6 628 aa9.91□□□□□ -0.82
NCBP3-201ENST00000389005 AKNAQ7Z591 1439 aa9.91□□□□□ -0.82
NCBP3-201ENST00000389005 CSPP1Q1MSJ5 1256 aa9.9□□□□□ -0.82
NCBP3-201ENST00000389005 DDX19BQ9UMR2 479 aa9.9□□□□□ -0.82
NCBP3-201ENST00000389005 FYCO1Q9BQS8 1478 aa9.9□□□□□ -0.82
NCBP3-201ENST00000389005 ZNF644Q9H582 1327 aaPredicted RBP9.9□□□□□ -0.82
NCBP3-201ENST00000389005 BRPF3Q9ULD4 1205 aa9.9□□□□□ -0.82
NCBP3-201ENST00000389005 DZIP1LQ8IYY4 767 aaKnown RBP9.9□□□□□ -0.82
NCBP3-201ENST00000389005 SLC4A10Q6U841 1118 aa9.9□□□□□ -0.83
NCBP3-201ENST00000389005 VSIG10Q8N0Z9 540 aa9.89□□□□□ -0.83
NCBP3-201ENST00000389005 CDCA7LQ96GN5 454 aa9.89□□□□□ -0.83
NCBP3-201ENST00000389005 GPATCH3Q96I76 525 aa9.89□□□□□ -0.83
NCBP3-201ENST00000389005 ADAMTS8Q9UP79 889 aa9.89□□□□□ -0.83
NCBP3-201ENST00000389005 NUTM2DQ5VT03 806 aaPredicted RBP9.89□□□□□ -0.83
NCBP3-201ENST00000389005 AAMPQ13685 434 aa9.88□□□□□ -0.83
NCBP3-201ENST00000389005 CHMP4AQ9BY43 222 aa9.88□□□□□ -0.83
NCBP3-201ENST00000389005 MLECQ14165 292 aa9.88□□□□□ -0.83
NCBP3-201ENST00000389005 SMG6Q86US8 1419 aaKnown RBP9.88□□□□□ -0.83
NCBP3-201ENST00000389005 C22orf23Q9BZE7 217 aa9.88□□□□□ -0.83
NCBP3-201ENST00000389005 ANKRD50Q9ULJ7 1429 aa9.87□□□□□ -0.83
NCBP3-201ENST00000389005 GNL2Q13823 731 aaKnown RBP9.87□□□□□ -0.83
NCBP3-201ENST00000389005 BACH2Q9BYV9 841 aa9.87□□□□□ -0.83
NCBP3-201ENST00000389005 PANK1Q8TE04 598 aa9.87□□□□□ -0.83
NCBP3-201ENST00000389005 GAPVD1Q14C86 1478 aa9.87□□□□□ -0.83
NCBP3-201ENST00000389005 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.87□□□□□ -0.834e-6■■■□□ 19.2
NCBP3-201ENST00000389005 KIF16BQ96L93 1317 aa9.87□□□□□ -0.83
NCBP3-201ENST00000389005 PRXQ9BXM0 1461 aa9.87□□□□□ -0.83
NCBP3-201ENST00000389005 HFM1A2PYH4 1435 aa9.87□□□□□ -0.83
NCBP3-201ENST00000389005 ELL2O00472 640 aaPredicted RBP9.87□□□□□ -0.83
NCBP3-201ENST00000389005 PNISRQ8TF01 805 aaKnown RBP9.87□□□□□ -0.83
NCBP3-201ENST00000389005 RAD54L2Q9Y4B4 1467 aa9.86□□□□□ -0.83
NCBP3-201ENST00000389005 FRAT2O75474 233 aaPredicted RBP9.86□□□□□ -0.83
NCBP3-201ENST00000389005 IL27Q8NEV9 243 aa9.86□□□□□ -0.83
NCBP3-201ENST00000389005 NBPF8Q3BBV2 869 aa9.86□□□□□ -0.83
NCBP3-201ENST00000389005 RUNDC1Q96C34 613 aa9.86□□□□□ -0.83
NCBP3-201ENST00000389005 EVC2Q86UK5 1308 aa9.86□□□□□ -0.83
NCBP3-201ENST00000389005 WASHC2CQ9Y4E1 1318 aa9.86□□□□□ -0.83
NCBP3-201ENST00000389005 FAM43AQ8N2R8 423 aa9.85□□□□□ -0.83
NCBP3-201ENST00000389005 HDAC5Q9UQL6 1122 aa9.85□□□□□ -0.83
NCBP3-201ENST00000389005 REC8O95072 547 aa9.85□□□□□ -0.83
NCBP3-201ENST00000389005 CCDC184Q52MB2 194 aa9.85□□□□□ -0.83
NCBP3-201ENST00000389005 CFTRP13569 1480 aa9.85□□□□□ -0.83
NCBP3-201ENST00000389005 MRE11P49959 708 aa9.84□□□□□ -0.83
NCBP3-201ENST00000389005 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.84□□□□□ -0.83
NCBP3-201ENST00000389005 TIAM1Q13009 1591 aa9.84□□□□□ -0.83
NCBP3-201ENST00000389005 AMER1Q5JTC6 1135 aaPredicted RBP9.84□□□□□ -0.83
NCBP3-201ENST00000389005 MSH5O43196 834 aa9.84□□□□□ -0.83
NCBP3-201ENST00000389005 FOXD4L6Q3SYB3 417 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms