RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 PLA2R1Q13018 1463 aa28.07■■■□□ 2.08
PDLIM5-205ENST00000380180 EIF4G2P78344 907 aaKnown RBP eCLIP28.07■■■□□ 2.08
PDLIM5-205ENST00000380180 DHX29Q7Z478 1369 aaKnown RBP28.07■■■□□ 2.08
PDLIM5-205ENST00000380180 POGZQ7Z3K3 1410 aa28.06■■■□□ 2.08
PDLIM5-205ENST00000380180 KDM5CP41229 1560 aa28.06■■■□□ 2.08
PDLIM5-205ENST00000380180 NEO1Q92859 1461 aa28.06■■■□□ 2.08
PDLIM5-205ENST00000380180 EIF2AK4Q9P2K8 1649 aaKnown RBP28.06■■■□□ 2.08
PDLIM5-205ENST00000380180 CCDC144AA2RUR9 1427 aa28.05■■■□□ 2.08
PDLIM5-205ENST00000380180 GLI2P10070 1586 aa28.03■■■□□ 2.08
PDLIM5-205ENST00000380180 E9PCH4 1651 aa28.02■■■□□ 2.08
PDLIM5-205ENST00000380180 KIF3BO15066 747 aa28.01■■■□□ 2.07
PDLIM5-205ENST00000380180 ATP10AO60312 1499 aa28■■■□□ 2.07
PDLIM5-205ENST00000380180 MLH3Q9UHC1 1453 aa28■■■□□ 2.07
PDLIM5-205ENST00000380180 HECW2Q9P2P5 1572 aa27.99■■■□□ 2.07
PDLIM5-205ENST00000380180 UHRF1BP1Q6BDS2 1440 aa27.99■■■□□ 2.07
PDLIM5-205ENST00000380180 ZNF326Q5BKZ1 582 aaKnown RBP27.99■■■□□ 2.07
PDLIM5-205ENST00000380180 VWDEQ8N2E2 1590 aa27.97■■■□□ 2.07
PDLIM5-205ENST00000380180 TET3O43151 1660 aa27.97■■■□□ 2.07
PDLIM5-205ENST00000380180 DCAF11Q8TEB1 546 aa27.96■■■□□ 2.07
PDLIM5-205ENST00000380180 MROH1Q8NDA8 1641 aa27.96■■■□□ 2.07
PDLIM5-205ENST00000380180 KANK1Q14678 1352 aa27.95■■■□□ 2.07
PDLIM5-205ENST00000380180 A2MP01023 1474 aa27.95■■■□□ 2.07
PDLIM5-205ENST00000380180 KDM2AQ9Y2K7 1162 aa27.95■■■□□ 2.06
PDLIM5-205ENST00000380180 PRDM15P57071 1507 aaPredicted RBP27.95■■■□□ 2.06
PDLIM5-205ENST00000380180 DIP2BQ9P265 1576 aa27.94■■■□□ 2.06
PDLIM5-205ENST00000380180 RAPGEF3O95398 923 aa27.94■■■□□ 2.06
PDLIM5-205ENST00000380180 SPATA31E1Q6ZUB1 1445 aa27.93■■■□□ 2.06
PDLIM5-205ENST00000380180 FAM69CQ0P6D2 419 aa27.92■■■□□ 2.06
PDLIM5-205ENST00000380180 RICTORQ6R327 1708 aa27.92■■■□□ 2.06
PDLIM5-205ENST00000380180 SPHKAPQ2M3C7 1700 aa27.91■■■□□ 2.06
PDLIM5-205ENST00000380180 ABCA6Q8N139 1617 aa27.9■■■□□ 2.06
PDLIM5-205ENST00000380180 RGL3Q3MIN7 710 aa27.9■■■□□ 2.06
PDLIM5-205ENST00000380180 WASHC2AQ641Q2 1341 aa27.89■■■□□ 2.06
PDLIM5-205ENST00000380180 YTHDC1Q96MU7 727 aaKnown RBP27.89■■■□□ 2.06
PDLIM5-205ENST00000380180 TSPOAP1O95153 1857 aa27.89■■■□□ 2.06
PDLIM5-205ENST00000380180 RALGAPBQ86X10 1494 aa27.88■■■□□ 2.05
PDLIM5-205ENST00000380180 FRMPD1Q5SYB0 1578 aa27.88■■■□□ 2.05
PDLIM5-205ENST00000380180 DNAJC5Q9H3Z4 198 aa27.88■■■□□ 2.05
PDLIM5-205ENST00000380180 RNF17Q9BXT8 1623 aaKnown RBP27.87■■■□□ 2.05
PDLIM5-205ENST00000380180 POLR1AO95602 1720 aaPredicted RBP27.86■■■□□ 2.05
PDLIM5-205ENST00000380180 TRPM2O94759 1503 aa27.85■■■□□ 2.05
PDLIM5-205ENST00000380180 PTPRTO14522 1441 aa27.85■■■□□ 2.05
PDLIM5-205ENST00000380180 C11orf95C9JLR9 678 aaPredicted RBP27.84■■■□□ 2.05
PDLIM5-205ENST00000380180 CENPBP07199 599 aaPredicted RBP27.84■■■□□ 2.05
PDLIM5-205ENST00000380180 CEP152O94986 1710 aa27.83■■■□□ 2.05
PDLIM5-205ENST00000380180 BCORL1Q5H9F3 1711 aa27.83■■■□□ 2.05
PDLIM5-205ENST00000380180 USP47Q96K76 1375 aa27.82■■■□□ 2.04
PDLIM5-205ENST00000380180 PPRC1Q5VV67 1664 aaKnown RBP27.82■■■□□ 2.04
PDLIM5-205ENST00000380180 DIP2CQ9Y2E4 1556 aa27.8■■■□□ 2.04
PDLIM5-205ENST00000380180 PRAG1Q86YV5 1406 aa27.8■■■□□ 2.04
PDLIM5-205ENST00000380180 TRPM1Q7Z4N2 1603 aa27.8■■■□□ 2.04
PDLIM5-205ENST00000380180 CLTCL1P53675 1640 aa27.79■■■□□ 2.04
PDLIM5-205ENST00000380180 CARD11Q9BXL7 1154 aa27.79■■■□□ 2.04
PDLIM5-205ENST00000380180 EFCAB6Q5THR3 1501 aa27.78■■■□□ 2.04
PDLIM5-205ENST00000380180 CCDC7Q96M83 1385 aa27.78■■■□□ 2.04
PDLIM5-205ENST00000380180 LMTK2Q8IWU2 1503 aa27.78■■■□□ 2.04
PDLIM5-205ENST00000380180 CFAP65Q6ZU64 1925 aaKnown RBP27.76■■■□□ 2.03
PDLIM5-205ENST00000380180 GGT6Q6P531 493 aa27.75■■■□□ 2.03
PDLIM5-205ENST00000380180 ANP32CO43423 234 aa27.75■■■□□ 2.03
PDLIM5-205ENST00000380180 KIF13AQ9H1H9 1805 aa27.75■■■□□ 2.03
PDLIM5-205ENST00000380180 ROCK2O75116 1388 aaKnown RBP27.73■■■□□ 2.03
PDLIM5-205ENST00000380180 YEATS2Q9ULM3 1422 aa27.72■■■□□ 2.03
PDLIM5-205ENST00000380180 KIF7Q2M1P5 1343 aa27.71■■■□□ 2.03
PDLIM5-205ENST00000380180 KIF1BO60333 1816 aa27.69■■■□□ 2.02
PDLIM5-205ENST00000380180 ZMYM4Q5VZL5 1548 aa27.68■■■□□ 2.02
PDLIM5-205ENST00000380180 CNTLNQ9NXG0 1405 aa27.67■■■□□ 2.02
PDLIM5-205ENST00000380180 NBPF1Q3BBV0 1214 aa27.67■■■□□ 2.02
PDLIM5-205ENST00000380180 UGGT1Q9NYU2 1555 aa27.66■■■□□ 2.02
PDLIM5-205ENST00000380180 WASHC2CQ9Y4E1 1318 aa27.66■■■□□ 2.02
PDLIM5-205ENST00000380180 ABCC3O15438 1527 aa27.65■■■□□ 2.02
PDLIM5-205ENST00000380180 NEURL4Q96JN8 1562 aa27.64■■■□□ 2.01
PDLIM5-205ENST00000380180 GPRASP1Q5JY77 1395 aa27.63■■■□□ 2.01
PDLIM5-205ENST00000380180 LAMC1P11047 1609 aa27.63■■■□□ 2.01
PDLIM5-205ENST00000380180 ST20-MTHFSA0A0A6YYL1 179 aa27.63■■■□□ 2.01
PDLIM5-205ENST00000380180 NPATQ14207 1427 aa27.63■■■□□ 2.01
PDLIM5-205ENST00000380180 CAMSAP1Q5T5Y3 1602 aa27.62■■■□□ 2.01
PDLIM5-205ENST00000380180 CCER2I3L3R5 266 aa27.62■■■□□ 2.01
PDLIM5-205ENST00000380180 MADDQ8WXG6 1647 aa27.62■■■□□ 2.01
PDLIM5-205ENST00000380180 STAC3Q96MF2 364 aa27.6■■■□□ 2.01
PDLIM5-205ENST00000380180 ARID4BQ4LE39 1312 aaPredicted RBP27.59■■■□□ 2.01
PDLIM5-205ENST00000380180 MROH2AA6NES4 1674 aa27.56■■■□□ 2
PDLIM5-205ENST00000380180 ZC3H13Q5T200 1668 aaKnown RBP27.56■■■□□ 2
PDLIM5-205ENST00000380180 SIGLEC1Q9BZZ2 1709 aa27.55■■■□□ 2
PDLIM5-205ENST00000380180 IFT172Q9UG01 1749 aa27.54■■■□□ 2
PDLIM5-205ENST00000380180 POLR3GLQ9BT43 218 aa27.53■■■□□ 2
PDLIM5-205ENST00000380180 COL17A1Q9UMD9 1497 aaPredicted RBP27.5■■□□□ 1.99
PDLIM5-205ENST00000380180 SCAF1Q9H7N4 1312 aaKnown RBP27.49■■□□□ 1.99
PDLIM5-205ENST00000380180 ADGRB3O60242 1522 aa27.48■■□□□ 1.99
PDLIM5-205ENST00000380180 REREQ9P2R6 1566 aa27.48■■□□□ 1.99
PDLIM5-205ENST00000380180 ARHGAP31Q2M1Z3 1444 aa27.48■■□□□ 1.99
PDLIM5-205ENST00000380180 NOS1P29475 1434 aa27.47■■□□□ 1.99
PDLIM5-205ENST00000380180 KIAA1210Q9ULL0 1709 aa27.47■■□□□ 1.99
PDLIM5-205ENST00000380180 MYOM2P54296 1465 aa27.46■■□□□ 1.99
PDLIM5-205ENST00000380180 IQGAP1P46940 1657 aa27.45■■□□□ 1.99
PDLIM5-205ENST00000380180 CHGAP10645 457 aaKnown RBP27.45■■□□□ 1.99
PDLIM5-205ENST00000380180 SYNMO15061 1565 aa27.44■■□□□ 1.98
PDLIM5-205ENST00000380180 PRKRIP1Q9H875 184 aaPredicted RBP27.43■■□□□ 1.98
PDLIM5-205ENST00000380180 PIK3C2BO00750 1634 aa27.43■■□□□ 1.98
PDLIM5-205ENST00000380180 AGLP35573 1532 aa27.43■■□□□ 1.98
PDLIM5-205ENST00000380180 PPLO60437 1756 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms