RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 PNISRQ8TF01 805 aaKnown RBP16.53■□□□□ 0.24
RFC3-201ENST00000380071 SYCP2Q9BX26 1530 aa16.52■□□□□ 0.23
RFC3-201ENST00000380071 TMC1Q8TDI8 760 aa16.51■□□□□ 0.23
RFC3-201ENST00000380071 CHD1O14646 1710 aa16.5■□□□□ 0.23
RFC3-201ENST00000380071 TTC37Q6PGP7 1564 aa16.5■□□□□ 0.23
RFC3-201ENST00000380071 NBPF1Q3BBV0 1214 aa16.49■□□□□ 0.23
RFC3-201ENST00000380071 SMG6Q86US8 1419 aaKnown RBP16.49■□□□□ 0.23
RFC3-201ENST00000380071 ARHGAP5Q13017 1502 aa16.49■□□□□ 0.23
RFC3-201ENST00000380071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.49■□□□□ 0.23
RFC3-201ENST00000380071 CCDC144AA2RUR9 1427 aa16.48■□□□□ 0.23
RFC3-201ENST00000380071 PLA2R1Q13018 1463 aa16.48■□□□□ 0.23
RFC3-201ENST00000380071 NUDCQ9Y266 331 aa16.48■□□□□ 0.23
RFC3-201ENST00000380071 ERCC6L2Q5T890 1561 aa16.48■□□□□ 0.23
RFC3-201ENST00000380071 MSH5O43196 834 aa16.47■□□□□ 0.23
RFC3-201ENST00000380071 PRAG1Q86YV5 1406 aa16.47■□□□□ 0.23
RFC3-201ENST00000380071 PLEKHH2Q8IVE3 1493 aa16.45■□□□□ 0.22
RFC3-201ENST00000380071 MYBBP1AQ9BQG0 1328 aaKnown RBP16.44■□□□□ 0.22
RFC3-201ENST00000380071 SHROOM2Q13796 1616 aa16.44■□□□□ 0.22
RFC3-201ENST00000380071 TRPM1Q7Z4N2 1603 aa16.44■□□□□ 0.22
RFC3-201ENST00000380071 MAST1Q9Y2H9 1570 aa16.43■□□□□ 0.22
RFC3-201ENST00000380071 RALBP1Q15311 655 aa16.43■□□□□ 0.22
RFC3-201ENST00000380071 UNC13BO14795 1591 aa16.42■□□□□ 0.22
RFC3-201ENST00000380071 A2MP01023 1474 aa16.42■□□□□ 0.22
RFC3-201ENST00000380071 LRPPRCP42704 1394 aaKnown RBP16.42■□□□□ 0.22
RFC3-201ENST00000380071 RNF123Q5XPI4 1314 aa16.41■□□□□ 0.22
RFC3-201ENST00000380071 BRD4O60885 1362 aaPredicted RBP16.41■□□□□ 0.22
RFC3-201ENST00000380071 ABCC2Q92887 1545 aa16.41■□□□□ 0.22
RFC3-201ENST00000380071 E9PCH4 1651 aa16.41■□□□□ 0.22
RFC3-201ENST00000380071 FANCIQ9NVI1 1328 aa16.4■□□□□ 0.22
RFC3-201ENST00000380071 MYO5CQ9NQX4 1742 aa16.4■□□□□ 0.22
RFC3-201ENST00000380071 PER1O15534 1290 aaPredicted RBP16.39■□□□□ 0.21
RFC3-201ENST00000380071 KTN1Q86UP2 1357 aaKnown RBP16.39■□□□□ 0.21
RFC3-201ENST00000380071 IQGAP3Q86VI3 1631 aa16.38■□□□□ 0.21
RFC3-201ENST00000380071 GPRASP1Q5JY77 1395 aa16.38■□□□□ 0.21
RFC3-201ENST00000380071 PLXNC1O60486 1568 aa16.37■□□□□ 0.21
RFC3-201ENST00000380071 TESK2Q96S53 571 aa16.37■□□□□ 0.21
RFC3-201ENST00000380071 SALL2Q9Y467 1007 aaPredicted RBP16.36■□□□□ 0.21
RFC3-201ENST00000380071 DISP3Q9P2K9 1392 aa16.36■□□□□ 0.21
RFC3-201ENST00000380071 PLCH2O75038 1416 aa16.36■□□□□ 0.21
RFC3-201ENST00000380071 DUOX2Q9NRD8 1548 aa16.36■□□□□ 0.21
RFC3-201ENST00000380071 PARD3Q8TEW0 1356 aa16.35■□□□□ 0.21
RFC3-201ENST00000380071 EFCAB2Q5VUJ9 269 aa16.35■□□□□ 0.21
RFC3-201ENST00000380071 NLRP13Q86W25 1043 aa16.35■□□□□ 0.21
RFC3-201ENST00000380071 CC2D1BQ5T0F9 858 aaKnown RBP16.34■□□□□ 0.21
RFC3-201ENST00000380071 TRAPPC8Q9Y2L5 1435 aa16.33■□□□□ 0.21
RFC3-201ENST00000380071 PANK3Q9H999 370 aa16.33■□□□□ 0.2
RFC3-201ENST00000380071 PRDM15P57071 1507 aaPredicted RBP16.33■□□□□ 0.2
RFC3-201ENST00000380071 CCDC136Q96JN2 1154 aa16.33■□□□□ 0.2
RFC3-201ENST00000380071 ERBINQ96RT1 1412 aa16.32■□□□□ 0.2
RFC3-201ENST00000380071 COL17A1Q9UMD9 1497 aaPredicted RBP16.32■□□□□ 0.2
RFC3-201ENST00000380071 ATP10AO60312 1499 aa16.32■□□□□ 0.2
RFC3-201ENST00000380071 MAGI2Q86UL8 1455 aa16.32■□□□□ 0.2
RFC3-201ENST00000380071 ZCCHC11Q5TAX3 1644 aaKnown RBP16.32■□□□□ 0.2
RFC3-201ENST00000380071 AFAP1Q8N556 730 aa16.3■□□□□ 0.2
RFC3-201ENST00000380071 LAMC1P11047 1609 aa16.29■□□□□ 0.2
RFC3-201ENST00000380071 TMF1P82094 1093 aa16.29■□□□□ 0.2
RFC3-201ENST00000380071 ABCC1P33527 1531 aa16.28■□□□□ 0.2
RFC3-201ENST00000380071 EIF2AK4Q9P2K8 1649 aaKnown RBP16.27■□□□□ 0.19
RFC3-201ENST00000380071 SPAG9O60271 1321 aaKnown RBP16.27■□□□□ 0.19
RFC3-201ENST00000380071 CDCA7LQ96GN5 454 aa16.26■□□□□ 0.19
RFC3-201ENST00000380071 WASHC2CQ9Y4E1 1318 aa16.26■□□□□ 0.19
RFC3-201ENST00000380071 RRP1P56182 461 aaKnown RBP16.26■□□□□ 0.19
RFC3-201ENST00000380071 RCAN3Q9UKA8 241 aa16.25■□□□□ 0.19
RFC3-201ENST00000380071 UHRF1BP1LA0JNW5 1464 aa16.25■□□□□ 0.19
RFC3-201ENST00000380071 CLASP1Q7Z460 1538 aa16.23■□□□□ 0.19
RFC3-201ENST00000380071 EXOC6Q8TAG9 804 aa16.23■□□□□ 0.19
RFC3-201ENST00000380071 ERICH6Q7L0X2 663 aa16.23■□□□□ 0.19
RFC3-201ENST00000380071 PDE3BQ13370 1112 aa16.22■□□□□ 0.19
RFC3-201ENST00000380071 RNF17Q9BXT8 1623 aaKnown RBP16.21■□□□□ 0.19
RFC3-201ENST00000380071 RTEL1-TNFRSF6BF6WH68 1400 aa16.2■□□□□ 0.18
RFC3-201ENST00000380071 BCL11AQ9H165 835 aa16.19■□□□□ 0.18
RFC3-201ENST00000380071 MADDQ8WXG6 1647 aa16.19■□□□□ 0.18
RFC3-201ENST00000380071 ZFYVE16Q7Z3T8 1539 aa16.19■□□□□ 0.18
RFC3-201ENST00000380071 WDR7Q9Y4E6 1490 aa16.18■□□□□ 0.18
RFC3-201ENST00000380071 PTPRTO14522 1441 aa16.17■□□□□ 0.18
RFC3-201ENST00000380071 BLMP54132 1417 aaPredicted RBP16.17■□□□□ 0.18
RFC3-201ENST00000380071 ADAMTS8Q9UP79 889 aa16.17■□□□□ 0.18
RFC3-201ENST00000380071 TRPM2O94759 1503 aa16.17■□□□□ 0.18
RFC3-201ENST00000380071 MYT1LQ9UL68 1186 aa16.17■□□□□ 0.18
RFC3-201ENST00000380071 CLTCL1P53675 1640 aa16.16■□□□□ 0.18
RFC3-201ENST00000380071 KIF3BO15066 747 aa16.16■□□□□ 0.18
RFC3-201ENST00000380071 KNSTRNQ9Y448 316 aa16.16■□□□□ 0.18
RFC3-201ENST00000380071 PLIN1O60240 522 aa16.16■□□□□ 0.18
RFC3-201ENST00000380071 IQGAP1P46940 1657 aa16.15■□□□□ 0.18
RFC3-201ENST00000380071 SPHKAPQ2M3C7 1700 aa16.15■□□□□ 0.18
RFC3-201ENST00000380071 PPP2R1AP30153 589 aa16.15■□□□□ 0.18
RFC3-201ENST00000380071 AMER1Q5JTC6 1135 aaPredicted RBP16.15■□□□□ 0.18
RFC3-201ENST00000380071 CEP152O94986 1710 aa16.14■□□□□ 0.17
RFC3-201ENST00000380071 INSRP06213 1382 aa16.14■□□□□ 0.17
RFC3-201ENST00000380071 SCAF11Q99590 1463 aaKnown RBP16.13■□□□□ 0.17
RFC3-201ENST00000380071 ARAP3Q8WWN8 1544 aa16.13■□□□□ 0.17
RFC3-201ENST00000380071 SCAPERQ9BY12 1400 aa16.13■□□□□ 0.17
RFC3-201ENST00000380071 FANCAO15360 1455 aa16.13■□□□□ 0.17
RFC3-201ENST00000380071 DEPDC5O75140 1603 aa16.13■□□□□ 0.17
RFC3-201ENST00000380071 ATP7AQ04656 1500 aa16.12■□□□□ 0.17
RFC3-201ENST00000380071 PAK3O75914 559 aaPredicted RBP16.11■□□□□ 0.17
RFC3-201ENST00000380071 STAC3Q96MF2 364 aa16.11■□□□□ 0.17
RFC3-201ENST00000380071 KANK1Q14678 1352 aa16.11■□□□□ 0.17
RFC3-201ENST00000380071 ZMYM4Q5VZL5 1548 aa16.11■□□□□ 0.17
RFC3-201ENST00000380071 TET3O43151 1660 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms