RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 CNTLNQ9NXG0 1405 aa34.95■■■■□ 3.19
NDEL1-202ENST00000380025 CCDC144AA2RUR9 1427 aa34.93■■■■□ 3.18
NDEL1-202ENST00000380025 KDM5CP41229 1560 aa34.93■■■■□ 3.18
NDEL1-202ENST00000380025 INO80Q9ULG1 1556 aaPredicted RBP34.92■■■■□ 3.18
NDEL1-202ENST00000380025 USP47Q96K76 1375 aa34.9■■■■□ 3.18
NDEL1-202ENST00000380025 ADGRL1O94910 1474 aa34.88■■■■□ 3.17
NDEL1-202ENST00000380025 ATP7AQ04656 1500 aa34.88■■■■□ 3.17
NDEL1-202ENST00000380025 KIF7Q2M1P5 1343 aa34.87■■■■□ 3.17
NDEL1-202ENST00000380025 ATP10AO60312 1499 aa34.86■■■■□ 3.17
NDEL1-202ENST00000380025 BCORL1Q5H9F3 1711 aa34.84■■■■□ 3.17
NDEL1-202ENST00000380025 DCAF11Q8TEB1 546 aa34.84■■■■□ 3.17
NDEL1-202ENST00000380025 SCAPERQ9BY12 1400 aa34.83■■■■□ 3.17
NDEL1-202ENST00000380025 DEPDC5O75140 1603 aa34.83■■■■□ 3.17
NDEL1-202ENST00000380025 KDM2AQ9Y2K7 1162 aa34.82■■■■□ 3.16
NDEL1-202ENST00000380025 NPM1P06748 294 aaKnown RBP eCLIP34.81■■■■□ 3.16
NDEL1-202ENST00000380025 E9PCH4 1651 aa34.76■■■■□ 3.16
NDEL1-202ENST00000380025 A2MP01023 1474 aa34.75■■■■□ 3.15
NDEL1-202ENST00000380025 PRAG1Q86YV5 1406 aa34.75■■■■□ 3.15
NDEL1-202ENST00000380025 CARD11Q9BXL7 1154 aa34.74■■■■□ 3.15
NDEL1-202ENST00000380025 TRPM1Q7Z4N2 1603 aa34.74■■■■□ 3.15
NDEL1-202ENST00000380025 EIF2AK4Q9P2K8 1649 aaKnown RBP34.7■■■■□ 3.15
NDEL1-202ENST00000380025 RGL3Q3MIN7 710 aa34.69■■■■□ 3.14
NDEL1-202ENST00000380025 VWDEQ8N2E2 1590 aa34.68■■■■□ 3.14
NDEL1-202ENST00000380025 KIDINS220Q9ULH0 1771 aa34.68■■■■□ 3.14
NDEL1-202ENST00000380025 CFAP74Q9C0B2 1584 aa34.68■■■■□ 3.14
NDEL1-202ENST00000380025 TET3O43151 1660 aa34.67■■■■□ 3.14
NDEL1-202ENST00000380025 ROCK2O75116 1388 aaKnown RBP34.66■■■■□ 3.14
NDEL1-202ENST00000380025 CD109Q6YHK3 1445 aa34.66■■■■□ 3.14
NDEL1-202ENST00000380025 ARID4BQ4LE39 1312 aaPredicted RBP34.66■■■■□ 3.14
NDEL1-202ENST00000380025 DHX29Q7Z478 1369 aaKnown RBP34.65■■■■□ 3.14
NDEL1-202ENST00000380025 ZNF518AQ6AHZ1 1483 aa34.65■■■■□ 3.14
NDEL1-202ENST00000380025 TRPM2O94759 1503 aa34.64■■■■□ 3.14
NDEL1-202ENST00000380025 SPHKAPQ2M3C7 1700 aa34.63■■■■□ 3.13
NDEL1-202ENST00000380025 PRKRIP1Q9H875 184 aaPredicted RBP34.63■■■■□ 3.13
NDEL1-202ENST00000380025 PRDM15P57071 1507 aaPredicted RBP34.63■■■■□ 3.13
NDEL1-202ENST00000380025 MROH1Q8NDA8 1641 aa34.62■■■■□ 3.13
NDEL1-202ENST00000380025 MYT1LQ9UL68 1186 aa34.61■■■■□ 3.13
NDEL1-202ENST00000380025 PTPRTO14522 1441 aa34.6■■■■□ 3.13
NDEL1-202ENST00000380025 LAMC1P11047 1609 aa34.58■■■■□ 3.13
NDEL1-202ENST00000380025 KANK1Q14678 1352 aa34.58■■■■□ 3.13
NDEL1-202ENST00000380025 GPRASP1Q5JY77 1395 aa34.58■■■■□ 3.13
NDEL1-202ENST00000380025 ST20-MTHFSA0A0A6YYL1 179 aa34.57■■■■□ 3.12
NDEL1-202ENST00000380025 KIF3BO15066 747 aa34.57■■■■□ 3.12
NDEL1-202ENST00000380025 CEP152O94986 1710 aa34.56■■■■□ 3.12
NDEL1-202ENST00000380025 POGZQ7Z3K3 1410 aa34.55■■■■□ 3.12
NDEL1-202ENST00000380025 CLTCL1P53675 1640 aa34.54■■■■□ 3.12
NDEL1-202ENST00000380025 NBPF1Q3BBV0 1214 aa34.52■■■■□ 3.12
NDEL1-202ENST00000380025 POLR3GLQ9BT43 218 aa34.5■■■■□ 3.11
NDEL1-202ENST00000380025 CCDC184Q52MB2 194 aa34.49■■■■□ 3.11
NDEL1-202ENST00000380025 MLH3Q9UHC1 1453 aa34.48■■■■□ 3.11
NDEL1-202ENST00000380025 HECW2Q9P2P5 1572 aa34.47■■■■□ 3.11
NDEL1-202ENST00000380025 RNF17Q9BXT8 1623 aaKnown RBP34.47■■■■□ 3.11
NDEL1-202ENST00000380025 MADDQ8WXG6 1647 aa34.44■■■■□ 3.1
NDEL1-202ENST00000380025 NEO1Q92859 1461 aa34.44■■■■□ 3.1
NDEL1-202ENST00000380025 EFCAB6Q5THR3 1501 aa34.43■■■■□ 3.1
NDEL1-202ENST00000380025 FRMPD1Q5SYB0 1578 aa34.43■■■■□ 3.1
NDEL1-202ENST00000380025 LMTK2Q8IWU2 1503 aa34.41■■■■□ 3.1
NDEL1-202ENST00000380025 PPRC1Q5VV67 1664 aaKnown RBP34.4■■■■□ 3.1
NDEL1-202ENST00000380025 SUPT16HQ9Y5B9 1047 aaKnown RBP34.4■■■■□ 3.1
NDEL1-202ENST00000380025 ABCA6Q8N139 1617 aa34.38■■■■□ 3.09
NDEL1-202ENST00000380025 NEURL4Q96JN8 1562 aa34.38■■■■□ 3.09
NDEL1-202ENST00000380025 MRS2Q9HD23 443 aa34.36■■■■□ 3.09
NDEL1-202ENST00000380025 MAP3K4Q9Y6R4 1608 aa34.36■■■■□ 3.09
NDEL1-202ENST00000380025 HNRNPUQ00839 825 aaKnown RBP eCLIP34.36■■■■□ 3.09
NDEL1-202ENST00000380025 RIMBP3CA6NJZ7 1639 aa34.32■■■■□ 3.08
NDEL1-202ENST00000380025 RIMBP3BA6NNM3 1639 aa34.32■■■■□ 3.08
NDEL1-202ENST00000380025 RIMBP3Q9UFD9 1639 aa34.32■■■■□ 3.08
NDEL1-202ENST00000380025 UGGT1Q9NYU2 1555 aa34.32■■■■□ 3.08
NDEL1-202ENST00000380025 COL17A1Q9UMD9 1497 aaPredicted RBP34.32■■■■□ 3.08
NDEL1-202ENST00000380025 STAC3Q96MF2 364 aa34.3■■■■□ 3.08
NDEL1-202ENST00000380025 CYB5RLQ6IPT4 315 aa34.3■■■■□ 3.08
NDEL1-202ENST00000380025 TESK2Q96S53 571 aa34.29■■■■□ 3.08
NDEL1-202ENST00000380025 IQGAP1P46940 1657 aa34.28■■■■□ 3.08
NDEL1-202ENST00000380025 KIF1BO60333 1816 aa34.27■■■■□ 3.08
NDEL1-202ENST00000380025 RICTORQ6R327 1708 aa34.27■■■■□ 3.08
NDEL1-202ENST00000380025 GLI2P10070 1586 aa34.27■■■■□ 3.08
NDEL1-202ENST00000380025 RAPGEF3O95398 923 aa34.26■■■■□ 3.07
NDEL1-202ENST00000380025 FAM9BQ8IZU0 186 aa34.25■■■■□ 3.07
NDEL1-202ENST00000380025 DISP3Q9P2K9 1392 aa34.24■■■■□ 3.07
NDEL1-202ENST00000380025 DIP2CQ9Y2E4 1556 aa34.23■■■■□ 3.07
NDEL1-202ENST00000380025 KIAA1210Q9ULL0 1709 aa34.21■■■■□ 3.07
NDEL1-202ENST00000380025 MROH2AA6NES4 1674 aa34.21■■■■□ 3.07
NDEL1-202ENST00000380025 CNGB1Q14028 1251 aaPredicted RBP34.21■■■■□ 3.07
NDEL1-202ENST00000380025 IFT172Q9UG01 1749 aa34.2■■■■□ 3.07
NDEL1-202ENST00000380025 MYOM2P54296 1465 aa34.18■■■■□ 3.06
NDEL1-202ENST00000380025 NPATQ14207 1427 aa34.18■■■■□ 3.06
NDEL1-202ENST00000380025 ABCC3O15438 1527 aa34.18■■■■□ 3.06
NDEL1-202ENST00000380025 GGT6Q6P531 493 aa34.17■■■■□ 3.06
NDEL1-202ENST00000380025 SCAF11Q99590 1463 aaKnown RBP34.14■■■■□ 3.06
NDEL1-202ENST00000380025 KTN1Q86UP2 1357 aaKnown RBP34.14■■■■□ 3.06
NDEL1-202ENST00000380025 ADGRB3O60242 1522 aa34.13■■■■□ 3.05
NDEL1-202ENST00000380025 TMF1P82094 1093 aa34.13■■■■□ 3.05
NDEL1-202ENST00000380025 CAMSAP1Q5T5Y3 1602 aa34.12■■■■□ 3.05
NDEL1-202ENST00000380025 DIP2BQ9P265 1576 aa34.11■■■■□ 3.05
NDEL1-202ENST00000380025 CFAP65Q6ZU64 1925 aaKnown RBP34.1■■■■□ 3.05
NDEL1-202ENST00000380025 FKBP8Q14318 412 aa34.08■■■■□ 3.05
NDEL1-202ENST00000380025 WASHC2CQ9Y4E1 1318 aa34.08■■■■□ 3.05
NDEL1-202ENST00000380025 RALBP1Q15311 655 aa34.08■■■■□ 3.05
NDEL1-202ENST00000380025 ZBED9Q6R2W3 1325 aa34.07■■■■□ 3.04
NDEL1-202ENST00000380025 PER1O15534 1290 aaPredicted RBP34.07■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms