RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 DIP2CQ9Y2E4 1556 aa35.78■■■■□ 3.32
ECHDC3-201ENST00000379215 FAM135AQ9P2D6 1515 aa35.78■■■■□ 3.32
ECHDC3-201ENST00000379215 DEPDC5O75140 1603 aa35.77■■■■□ 3.32
ECHDC3-201ENST00000379215 IQGAP3Q86VI3 1631 aa35.77■■■■□ 3.32
ECHDC3-201ENST00000379215 BCORL1Q5H9F3 1711 aa35.72■■■■□ 3.31
ECHDC3-201ENST00000379215 TIMELESSQ9UNS1 1208 aa35.72■■■■□ 3.31
ECHDC3-201ENST00000379215 KANK1Q14678 1352 aa35.71■■■■□ 3.31
ECHDC3-201ENST00000379215 PRDM15P57071 1507 aaPredicted RBP35.69■■■■□ 3.3
ECHDC3-201ENST00000379215 KIF3BO15066 747 aa35.69■■■■□ 3.3
ECHDC3-201ENST00000379215 PKD2Q13563 968 aa35.68■■■■□ 3.3
ECHDC3-201ENST00000379215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.68■■■■□ 3.3
ECHDC3-201ENST00000379215 YEATS2Q9ULM3 1422 aa35.68■■■■□ 3.3
ECHDC3-201ENST00000379215 RNF17Q9BXT8 1623 aaKnown RBP35.68■■■■□ 3.3
ECHDC3-201ENST00000379215 COL17A1Q9UMD9 1497 aaPredicted RBP35.67■■■■□ 3.3
ECHDC3-201ENST00000379215 ANKRD30BQ9BXX2 1392 aa35.67■■■■□ 3.3
ECHDC3-201ENST00000379215 REREQ9P2R6 1566 aa35.66■■■■□ 3.3
ECHDC3-201ENST00000379215 ATP10AO60312 1499 aa35.65■■■■□ 3.3
ECHDC3-201ENST00000379215 SIN3AQ96ST3 1273 aa35.63■■■■□ 3.29
ECHDC3-201ENST00000379215 VWDEQ8N2E2 1590 aa35.63■■■■□ 3.29
ECHDC3-201ENST00000379215 ARHGEF40Q8TER5 1519 aa35.6■■■■□ 3.29
ECHDC3-201ENST00000379215 NEUROD1Q13562 356 aa35.6■■■■□ 3.29
ECHDC3-201ENST00000379215 MROH1Q8NDA8 1641 aa35.6■■■■□ 3.29
ECHDC3-201ENST00000379215 FOXD1Q16676 465 aa35.58■■■■□ 3.29
ECHDC3-201ENST00000379215 TONSLQ96HA7 1378 aa35.54■■■■□ 3.28
ECHDC3-201ENST00000379215 TET3O43151 1660 aa35.54■■■■□ 3.28
ECHDC3-201ENST00000379215 AGLP35573 1532 aa35.54■■■■□ 3.28
ECHDC3-201ENST00000379215 LMTK2Q8IWU2 1503 aa35.54■■■■□ 3.28
ECHDC3-201ENST00000379215 RPRD2Q5VT52 1461 aaKnown RBP35.53■■■■□ 3.28
ECHDC3-201ENST00000379215 GGT6Q6P531 493 aa35.44■■■■□ 3.26
ECHDC3-201ENST00000379215 EFCAB6Q5THR3 1501 aa35.42■■■■□ 3.26
ECHDC3-201ENST00000379215 ZC3H13Q5T200 1668 aaKnown RBP35.42■■■■□ 3.26
ECHDC3-201ENST00000379215 E9PCH4 1651 aa35.4■■■■□ 3.26
ECHDC3-201ENST00000379215 PPP6R1Q9UPN7 881 aa35.39■■■■□ 3.26
ECHDC3-201ENST00000379215 ABCC3O15438 1527 aa35.39■■■■□ 3.26
ECHDC3-201ENST00000379215 CCDC144AA2RUR9 1427 aa35.38■■■■□ 3.25
ECHDC3-201ENST00000379215 WASHC2CQ9Y4E1 1318 aa35.37■■■■□ 3.25
ECHDC3-201ENST00000379215 CEP152O94986 1710 aa35.35■■■■□ 3.25
ECHDC3-201ENST00000379215 PTPRTO14522 1441 aa35.34■■■■□ 3.25
ECHDC3-201ENST00000379215 PLA2R1Q13018 1463 aa35.34■■■■□ 3.25
ECHDC3-201ENST00000379215 TRPM2O94759 1503 aa35.33■■■■□ 3.25
ECHDC3-201ENST00000379215 PPP1R15AO75807 674 aaPredicted RBP35.3■■■■□ 3.24
ECHDC3-201ENST00000379215 SPHKAPQ2M3C7 1700 aa35.29■■■■□ 3.24
ECHDC3-201ENST00000379215 CAMSAP1Q5T5Y3 1602 aa35.28■■■■□ 3.24
ECHDC3-201ENST00000379215 ARHGAP31Q2M1Z3 1444 aa35.28■■■■□ 3.24
ECHDC3-201ENST00000379215 NPATQ14207 1427 aa35.23■■■■□ 3.23
ECHDC3-201ENST00000379215 L3MBTL2Q969R5 705 aa35.22■■■■□ 3.23
ECHDC3-201ENST00000379215 SIGLEC1Q9BZZ2 1709 aa35.22■■■■□ 3.23
ECHDC3-201ENST00000379215 CNTLNQ9NXG0 1405 aa35.19■■■■□ 3.22
ECHDC3-201ENST00000379215 ARID4BQ4LE39 1312 aaPredicted RBP35.15■■■■□ 3.22
ECHDC3-201ENST00000379215 NEURL4Q96JN8 1562 aa35.12■■■■□ 3.21
ECHDC3-201ENST00000379215 CLTCL1P53675 1640 aa35.11■■■■□ 3.21
ECHDC3-201ENST00000379215 NOS1P29475 1434 aa35.11■■■■□ 3.21
ECHDC3-201ENST00000379215 ESF1Q9H501 851 aaKnown RBP35.1■■■■□ 3.21
ECHDC3-201ENST00000379215 MLECQ14165 292 aa35.07■■■■□ 3.21
ECHDC3-201ENST00000379215 SPATA31E1Q6ZUB1 1445 aa35.07■■■■□ 3.2
ECHDC3-201ENST00000379215 CLTCQ00610 1675 aaKnown RBP35.06■■■■□ 3.2
ECHDC3-201ENST00000379215 UHRF1BP1Q6BDS2 1440 aa35.02■■■■□ 3.2
ECHDC3-201ENST00000379215 STAC3Q96MF2 364 aa35■■■■□ 3.19
ECHDC3-201ENST00000379215 PREX1Q8TCU6 1659 aa34.99■■■■□ 3.19
ECHDC3-201ENST00000379215 ZNF316A6NFI3 1004 aaPredicted RBP34.97■■■■□ 3.19
ECHDC3-201ENST00000379215 SLC52A1Q9NWF4 448 aa34.97■■■■□ 3.19
ECHDC3-201ENST00000379215 ERVK-7P63135 1459 aa34.97■■■■□ 3.19
ECHDC3-201ENST00000379215 KIF1BO60333 1816 aa34.97■■■■□ 3.19
ECHDC3-201ENST00000379215 DCAF11Q8TEB1 546 aa34.96■■■■□ 3.19
ECHDC3-201ENST00000379215 PIK3C2BO00750 1634 aa34.96■■■■□ 3.19
ECHDC3-201ENST00000379215 SYNMO15061 1565 aa34.96■■■■□ 3.19
ECHDC3-201ENST00000379215 UGGT1Q9NYU2 1555 aa34.96■■■■□ 3.19
ECHDC3-201ENST00000379215 RGL3Q3MIN7 710 aa34.95■■■■□ 3.19
ECHDC3-201ENST00000379215 MROH2AA6NES4 1674 aa34.95■■■■□ 3.19
ECHDC3-201ENST00000379215 ADGRB3O60242 1522 aa34.92■■■■□ 3.18
ECHDC3-201ENST00000379215 ZMYM3Q14202 1370 aa34.92■■■■□ 3.18
ECHDC3-201ENST00000379215 SPATA31D1Q6ZQQ2 1576 aa34.92■■■■□ 3.18
ECHDC3-201ENST00000379215 NBPF8Q3BBV2 869 aa34.89■■■■□ 3.18
ECHDC3-201ENST00000379215 CFAP65Q6ZU64 1925 aaKnown RBP34.88■■■■□ 3.17
ECHDC3-201ENST00000379215 PRAG1Q86YV5 1406 aa34.86■■■■□ 3.17
ECHDC3-201ENST00000379215 KDM2AQ9Y2K7 1162 aa34.86■■■■□ 3.17
ECHDC3-201ENST00000379215 RALGAPBQ86X10 1494 aa34.85■■■■□ 3.17
ECHDC3-201ENST00000379215 ZNF326Q5BKZ1 582 aaKnown RBP34.83■■■■□ 3.17
ECHDC3-201ENST00000379215 FER1L4A9Z1Z3 1794 aa34.82■■■■□ 3.16
ECHDC3-201ENST00000379215 FBXO31Q5XUX0 539 aaPredicted RBP34.81■■■■□ 3.16
ECHDC3-201ENST00000379215 RPGRIP1LQ68CZ1 1315 aa34.81■■■■□ 3.16
ECHDC3-201ENST00000379215 MYOM2P54296 1465 aa34.81■■■■□ 3.16
ECHDC3-201ENST00000379215 IDI1Q13907 227 aa34.79■■■■□ 3.16
ECHDC3-201ENST00000379215 CHGAP10645 457 aaKnown RBP34.78■■■■□ 3.16
ECHDC3-201ENST00000379215 IFT172Q9UG01 1749 aa34.74■■■■□ 3.15
ECHDC3-201ENST00000379215 MADDQ8WXG6 1647 aa34.73■■■■□ 3.15
ECHDC3-201ENST00000379215 EIF4G2P78344 907 aaKnown RBP eCLIP34.73■■■■□ 3.15
ECHDC3-201ENST00000379215 TNRQ92752 1358 aa34.73■■■■□ 3.15
ECHDC3-201ENST00000379215 TRPM1Q7Z4N2 1603 aa34.71■■■■□ 3.15
ECHDC3-201ENST00000379215 TMEM131LA2VDJ0 1609 aa34.71■■■■□ 3.15
ECHDC3-201ENST00000379215 ROCK2O75116 1388 aaKnown RBP34.68■■■■□ 3.14
ECHDC3-201ENST00000379215 NRXN1Q9ULB1 1477 aa34.67■■■■□ 3.14
ECHDC3-201ENST00000379215 C3P01024 1663 aa34.67■■■■□ 3.14
ECHDC3-201ENST00000379215 PPLO60437 1756 aa34.67■■■■□ 3.14
ECHDC3-201ENST00000379215 GPRASP1Q5JY77 1395 aa34.66■■■■□ 3.14
ECHDC3-201ENST00000379215 ADAMTSL3P82987 1691 aa34.65■■■■□ 3.14
ECHDC3-201ENST00000379215 STAG3Q9UJ98 1225 aa34.65■■■■□ 3.14
ECHDC3-201ENST00000379215 LAMC1P11047 1609 aa34.65■■■■□ 3.14
ECHDC3-201ENST00000379215 NLRP1Q9C000 1473 aa34.64■■■■□ 3.14
ECHDC3-201ENST00000379215 CARD11Q9BXL7 1154 aa34.63■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms