RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 DHX29Q7Z478 1369 aaKnown RBP24.83■■□□□ 1.57
THUMPD2-201ENST00000378727 MLH3Q9UHC1 1453 aa24.83■■□□□ 1.56
THUMPD2-201ENST00000378727 EIF2AK4Q9P2K8 1649 aaKnown RBP24.82■■□□□ 1.56
THUMPD2-201ENST00000378727 FAM69CQ0P6D2 419 aa24.82■■□□□ 1.56
THUMPD2-201ENST00000378727 HECW2Q9P2P5 1572 aa24.82■■□□□ 1.56
THUMPD2-201ENST00000378727 PLA2R1Q13018 1463 aa24.78■■□□□ 1.56
THUMPD2-201ENST00000378727 RICTORQ6R327 1708 aa24.78■■□□□ 1.56
THUMPD2-201ENST00000378727 RAPGEF3O95398 923 aa24.76■■□□□ 1.55
THUMPD2-201ENST00000378727 VWDEQ8N2E2 1590 aa24.76■■□□□ 1.55
THUMPD2-201ENST00000378727 MROH1Q8NDA8 1641 aa24.76■■□□□ 1.55
THUMPD2-201ENST00000378727 PPRC1Q5VV67 1664 aaKnown RBP24.76■■□□□ 1.55
THUMPD2-201ENST00000378727 A2MP01023 1474 aa24.75■■□□□ 1.55
THUMPD2-201ENST00000378727 ABCA6Q8N139 1617 aa24.75■■□□□ 1.55
THUMPD2-201ENST00000378727 KIF3BO15066 747 aa24.74■■□□□ 1.55
THUMPD2-201ENST00000378727 FRMPD1Q5SYB0 1578 aa24.74■■□□□ 1.55
THUMPD2-201ENST00000378727 NBPF8Q3BBV2 869 aa24.74■■□□□ 1.55
THUMPD2-201ENST00000378727 PRDM15P57071 1507 aaPredicted RBP24.74■■□□□ 1.55
THUMPD2-201ENST00000378727 TSPOAP1O95153 1857 aa24.74■■□□□ 1.55
THUMPD2-201ENST00000378727 E9PCH4 1651 aa24.73■■□□□ 1.55
THUMPD2-201ENST00000378727 ATP10AO60312 1499 aa24.72■■□□□ 1.55
THUMPD2-201ENST00000378727 HIRIP3Q9BW71 556 aaPredicted RBP24.71■■□□□ 1.55
THUMPD2-201ENST00000378727 CCDC144AA2RUR9 1427 aa24.7■■□□□ 1.54
THUMPD2-201ENST00000378727 KIF13AQ9H1H9 1805 aa24.7■■□□□ 1.54
THUMPD2-201ENST00000378727 TET3O43151 1660 aa24.7■■□□□ 1.54
THUMPD2-201ENST00000378727 RNF17Q9BXT8 1623 aaKnown RBP24.68■■□□□ 1.54
THUMPD2-201ENST00000378727 KANK1Q14678 1352 aa24.68■■□□□ 1.54
THUMPD2-201ENST00000378727 DIP2CQ9Y2E4 1556 aa24.67■■□□□ 1.54
THUMPD2-201ENST00000378727 BCORL1Q5H9F3 1711 aa24.66■■□□□ 1.54
THUMPD2-201ENST00000378727 UHRF1BP1Q6BDS2 1440 aa24.62■■□□□ 1.53
THUMPD2-201ENST00000378727 MIER1Q8N108 512 aa24.62■■□□□ 1.53
THUMPD2-201ENST00000378727 SPHKAPQ2M3C7 1700 aa24.62■■□□□ 1.53
THUMPD2-201ENST00000378727 YEATS2Q9ULM3 1422 aa24.61■■□□□ 1.53
THUMPD2-201ENST00000378727 ZMYM4Q5VZL5 1548 aa24.61■■□□□ 1.53
THUMPD2-201ENST00000378727 PTPRTO14522 1441 aa24.61■■□□□ 1.53
THUMPD2-201ENST00000378727 TRPM2O94759 1503 aa24.6■■□□□ 1.53
THUMPD2-201ENST00000378727 CEP152O94986 1710 aa24.59■■□□□ 1.53
THUMPD2-201ENST00000378727 LMTK2Q8IWU2 1503 aa24.59■■□□□ 1.53
THUMPD2-201ENST00000378727 HSPA5P11021 654 aaKnown RBP24.59■■□□□ 1.53
THUMPD2-201ENST00000378727 EFCAB6Q5THR3 1501 aa24.58■■□□□ 1.53
THUMPD2-201ENST00000378727 EIF4G2P78344 907 aaKnown RBP eCLIP24.57■■□□□ 1.52
THUMPD2-201ENST00000378727 DCAF11Q8TEB1 546 aa24.57■■□□□ 1.52
THUMPD2-201ENST00000378727 ZNF326Q5BKZ1 582 aaKnown RBP24.56■■□□□ 1.52
THUMPD2-201ENST00000378727 CLTCL1P53675 1640 aa24.54■■□□□ 1.52
THUMPD2-201ENST00000378727 KDM2AQ9Y2K7 1162 aa24.54■■□□□ 1.52
THUMPD2-201ENST00000378727 RGL3Q3MIN7 710 aa24.53■■□□□ 1.52
THUMPD2-201ENST00000378727 RALGAPBQ86X10 1494 aa24.53■■□□□ 1.52
THUMPD2-201ENST00000378727 SPATA31E1Q6ZUB1 1445 aa24.53■■□□□ 1.52
THUMPD2-201ENST00000378727 GGT6Q6P531 493 aa24.52■■□□□ 1.52
THUMPD2-201ENST00000378727 DDX10Q13206 875 aaKnown RBP24.51■■□□□ 1.51
THUMPD2-201ENST00000378727 ABCC3O15438 1527 aa24.49■■□□□ 1.51
THUMPD2-201ENST00000378727 COL17A1Q9UMD9 1497 aaPredicted RBP24.49■■□□□ 1.51
THUMPD2-201ENST00000378727 PRAG1Q86YV5 1406 aa24.48■■□□□ 1.51
THUMPD2-201ENST00000378727 NPATQ14207 1427 aa24.45■■□□□ 1.5
THUMPD2-201ENST00000378727 TRPM1Q7Z4N2 1603 aa24.45■■□□□ 1.5
THUMPD2-201ENST00000378727 UGGT1Q9NYU2 1555 aa24.44■■□□□ 1.5
THUMPD2-201ENST00000378727 CAMSAP1Q5T5Y3 1602 aa24.44■■□□□ 1.5
THUMPD2-201ENST00000378727 WASHC2CQ9Y4E1 1318 aa24.44■■□□□ 1.5
THUMPD2-201ENST00000378727 WASHC2AQ641Q2 1341 aa24.43■■□□□ 1.5
THUMPD2-201ENST00000378727 REREQ9P2R6 1566 aa24.42■■□□□ 1.5
THUMPD2-201ENST00000378727 USP47Q96K76 1375 aa24.42■■□□□ 1.5
THUMPD2-201ENST00000378727 NEURL4Q96JN8 1562 aa24.41■■□□□ 1.5
THUMPD2-201ENST00000378727 ZC3H13Q5T200 1668 aaKnown RBP24.41■■□□□ 1.5
THUMPD2-201ENST00000378727 CFAP65Q6ZU64 1925 aaKnown RBP24.4■■□□□ 1.5
THUMPD2-201ENST00000378727 C11orf95C9JLR9 678 aaPredicted RBP24.39■■□□□ 1.5
THUMPD2-201ENST00000378727 CARD11Q9BXL7 1154 aa24.38■■□□□ 1.49
THUMPD2-201ENST00000378727 SIGLEC1Q9BZZ2 1709 aa24.38■■□□□ 1.49
THUMPD2-201ENST00000378727 KIF1BO60333 1816 aa24.37■■□□□ 1.49
THUMPD2-201ENST00000378727 POLR1AO95602 1720 aaPredicted RBP24.37■■□□□ 1.49
THUMPD2-201ENST00000378727 ROCK2O75116 1388 aaKnown RBP24.36■■□□□ 1.49
THUMPD2-201ENST00000378727 AGLP35573 1532 aa24.36■■□□□ 1.49
THUMPD2-201ENST00000378727 ARHGEF40Q8TER5 1519 aa24.36■■□□□ 1.49
THUMPD2-201ENST00000378727 MADDQ8WXG6 1647 aa24.35■■□□□ 1.49
THUMPD2-201ENST00000378727 CCDC7Q96M83 1385 aa24.35■■□□□ 1.49
THUMPD2-201ENST00000378727 CNTLNQ9NXG0 1405 aa24.34■■□□□ 1.49
THUMPD2-201ENST00000378727 MROH2AA6NES4 1674 aa24.34■■□□□ 1.49
THUMPD2-201ENST00000378727 ARHGAP31Q2M1Z3 1444 aa24.34■■□□□ 1.49
THUMPD2-201ENST00000378727 GPRASP1Q5JY77 1395 aa24.33■■□□□ 1.49
THUMPD2-201ENST00000378727 NOS1P29475 1434 aa24.33■■□□□ 1.49
THUMPD2-201ENST00000378727 NBPF1Q3BBV0 1214 aa24.33■■□□□ 1.48
THUMPD2-201ENST00000378727 LAMC1P11047 1609 aa24.32■■□□□ 1.48
THUMPD2-201ENST00000378727 KIF7Q2M1P5 1343 aa24.3■■□□□ 1.48
THUMPD2-201ENST00000378727 ADGRB3O60242 1522 aa24.29■■□□□ 1.48
THUMPD2-201ENST00000378727 SYNMO15061 1565 aa24.29■■□□□ 1.48
THUMPD2-201ENST00000378727 STAC3Q96MF2 364 aa24.29■■□□□ 1.48
THUMPD2-201ENST00000378727 IFT172Q9UG01 1749 aa24.28■■□□□ 1.48
THUMPD2-201ENST00000378727 PIK3C2BO00750 1634 aa24.27■■□□□ 1.48
THUMPD2-201ENST00000378727 MYOM2P54296 1465 aa24.25■■□□□ 1.47
THUMPD2-201ENST00000378727 ST20-MTHFSA0A0A6YYL1 179 aa24.25■■□□□ 1.47
THUMPD2-201ENST00000378727 PREX1Q8TCU6 1659 aa24.24■■□□□ 1.47
THUMPD2-201ENST00000378727 PPP6R1Q9UPN7 881 aa24.22■■□□□ 1.47
THUMPD2-201ENST00000378727 CLTCQ00610 1675 aaKnown RBP24.2■■□□□ 1.47
THUMPD2-201ENST00000378727 KIAA1210Q9ULL0 1709 aa24.2■■□□□ 1.46
THUMPD2-201ENST00000378727 PPLO60437 1756 aa24.19■■□□□ 1.46
THUMPD2-201ENST00000378727 CHGAP10645 457 aaKnown RBP24.19■■□□□ 1.46
THUMPD2-201ENST00000378727 NRXN1Q9ULB1 1477 aa24.18■■□□□ 1.46
THUMPD2-201ENST00000378727 ANP32CO43423 234 aa24.18■■□□□ 1.46
THUMPD2-201ENST00000378727 ARID4BQ4LE39 1312 aaPredicted RBP24.18■■□□□ 1.46
THUMPD2-201ENST00000378727 ADGRF5Q8IZF2 1346 aa24.18■■□□□ 1.46
THUMPD2-201ENST00000378727 YTHDC1Q96MU7 727 aaKnown RBP24.17■■□□□ 1.46
THUMPD2-201ENST00000378727 IQGAP1P46940 1657 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms