RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 KDM2AQ9Y2K7 1162 aa26.71■■□□□ 1.87
SHROOM1-202ENST00000378676 TRPM1Q7Z4N2 1603 aa26.71■■□□□ 1.87
SHROOM1-202ENST00000378676 DCAF11Q8TEB1 546 aa26.68■■□□□ 1.86
SHROOM1-202ENST00000378676 PLXNC1O60486 1568 aa26.67■■□□□ 1.86
SHROOM1-202ENST00000378676 ABCC2Q92887 1545 aa26.67■■□□□ 1.86
SHROOM1-202ENST00000378676 ROCK2O75116 1388 aaKnown RBP26.66■■□□□ 1.86
SHROOM1-202ENST00000378676 IQGAP3Q86VI3 1631 aa26.64■■□□□ 1.86
SHROOM1-202ENST00000378676 ST20-MTHFSA0A0A6YYL1 179 aa26.64■■□□□ 1.85
SHROOM1-202ENST00000378676 ERICH6BQ5W0A0 696 aa26.63■■□□□ 1.85
SHROOM1-202ENST00000378676 ANP32EQ9BTT0 268 aa26.63■■□□□ 1.85
SHROOM1-202ENST00000378676 RSPH4AQ5TD94 716 aa26.62■■□□□ 1.85
SHROOM1-202ENST00000378676 PLA2R1Q13018 1463 aa26.61■■□□□ 1.85
SHROOM1-202ENST00000378676 CCDC144AA2RUR9 1427 aa26.61■■□□□ 1.85
SHROOM1-202ENST00000378676 PRAG1Q86YV5 1406 aa26.61■■□□□ 1.85
SHROOM1-202ENST00000378676 PPP4R2Q9NY27 417 aa26.6■■□□□ 1.85
SHROOM1-202ENST00000378676 SMG6Q86US8 1419 aaKnown RBP26.58■■□□□ 1.85
SHROOM1-202ENST00000378676 ZCCHC11Q5TAX3 1644 aaKnown RBP26.57■■□□□ 1.84
SHROOM1-202ENST00000378676 A2MP01023 1474 aa26.57■■□□□ 1.84
SHROOM1-202ENST00000378676 PLEKHH2Q8IVE3 1493 aa26.57■■□□□ 1.84
SHROOM1-202ENST00000378676 LAMC1P11047 1609 aa26.54■■□□□ 1.84
SHROOM1-202ENST00000378676 OSCARQ8IYS5 282 aa26.53■■□□□ 1.84
SHROOM1-202ENST00000378676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.53■■□□□ 1.843e-8■■■■□ 21
SHROOM1-202ENST00000378676 DUOX2Q9NRD8 1548 aa26.53■■□□□ 1.84
SHROOM1-202ENST00000378676 PNISRQ8TF01 805 aaKnown RBP26.53■■□□□ 1.84
SHROOM1-202ENST00000378676 MAGI2Q86UL8 1455 aa26.53■■□□□ 1.84
SHROOM1-202ENST00000378676 SENP3-EIF4A1A0A087X0R7 540 aa26.5■■□□□ 1.83
SHROOM1-202ENST00000378676 PRDM15P57071 1507 aaPredicted RBP26.49■■□□□ 1.83
SHROOM1-202ENST00000378676 RGL3Q3MIN7 710 aa26.49■■□□□ 1.83
SHROOM1-202ENST00000378676 B4GALNT3Q6L9W6 998 aa26.48■■□□□ 1.83
SHROOM1-202ENST00000378676 NBPF1Q3BBV0 1214 aa26.48■■□□□ 1.83
SHROOM1-202ENST00000378676 NUDCQ9Y266 331 aa26.48■■□□□ 1.83
SHROOM1-202ENST00000378676 ABCC1P33527 1531 aa26.48■■□□□ 1.83
SHROOM1-202ENST00000378676 TMC1Q8TDI8 760 aa26.47■■□□□ 1.83
SHROOM1-202ENST00000378676 GPRASP1Q5JY77 1395 aa26.47■■□□□ 1.83
SHROOM1-202ENST00000378676 EIF2AK4Q9P2K8 1649 aaKnown RBP26.46■■□□□ 1.83
SHROOM1-202ENST00000378676 LRPPRCP42704 1394 aaKnown RBP26.46■■□□□ 1.83
SHROOM1-202ENST00000378676 ERBINQ96RT1 1412 aa26.45■■□□□ 1.83
SHROOM1-202ENST00000378676 MYBBP1AQ9BQG0 1328 aaKnown RBP26.45■■□□□ 1.82
SHROOM1-202ENST00000378676 BRD4O60885 1362 aaPredicted RBP26.44■■□□□ 1.82
SHROOM1-202ENST00000378676 PLCH2O75038 1416 aa26.44■■□□□ 1.82
SHROOM1-202ENST00000378676 COL17A1Q9UMD9 1497 aaPredicted RBP26.44■■□□□ 1.82
SHROOM1-202ENST00000378676 KTN1Q86UP2 1357 aaKnown RBP26.43■■□□□ 1.82
SHROOM1-202ENST00000378676 UHRF1BP1LA0JNW5 1464 aa26.43■■□□□ 1.82
SHROOM1-202ENST00000378676 RNF17Q9BXT8 1623 aaKnown RBP26.43■■□□□ 1.82
SHROOM1-202ENST00000378676 ATP10AO60312 1499 aa26.42■■□□□ 1.82
SHROOM1-202ENST00000378676 RALBP1Q15311 655 aa26.4■■□□□ 1.82
SHROOM1-202ENST00000378676 RNF123Q5XPI4 1314 aa26.4■■□□□ 1.82
SHROOM1-202ENST00000378676 BCL11AQ9H165 835 aa26.4■■□□□ 1.82
SHROOM1-202ENST00000378676 TRAPPC8Q9Y2L5 1435 aa26.39■■□□□ 1.82
SHROOM1-202ENST00000378676 PARD3Q8TEW0 1356 aa26.38■■□□□ 1.81
SHROOM1-202ENST00000378676 DISP3Q9P2K9 1392 aa26.38■■□□□ 1.81
SHROOM1-202ENST00000378676 MSH5O43196 834 aa26.38■■□□□ 1.81
SHROOM1-202ENST00000378676 TESK2Q96S53 571 aa26.34■■□□□ 1.81
SHROOM1-202ENST00000378676 FANCIQ9NVI1 1328 aa26.33■■□□□ 1.81
SHROOM1-202ENST00000378676 EFCAB2Q5VUJ9 269 aa26.33■■□□□ 1.81
SHROOM1-202ENST00000378676 MADDQ8WXG6 1647 aa26.33■■□□□ 1.8
SHROOM1-202ENST00000378676 ZFYVE16Q7Z3T8 1539 aa26.32■■□□□ 1.8
SHROOM1-202ENST00000378676 CEP152O94986 1710 aa26.32■■□□□ 1.8
SHROOM1-202ENST00000378676 SPHKAPQ2M3C7 1700 aa26.31■■□□□ 1.8
SHROOM1-202ENST00000378676 PER1O15534 1290 aaPredicted RBP26.31■■□□□ 1.8
SHROOM1-202ENST00000378676 IQGAP1P46940 1657 aa26.3■■□□□ 1.8
SHROOM1-202ENST00000378676 NLRP13Q86W25 1043 aa26.28■■□□□ 1.8
SHROOM1-202ENST00000378676 DEPDC5O75140 1603 aa26.28■■□□□ 1.8
SHROOM1-202ENST00000378676 TRPM2O94759 1503 aa26.26■■□□□ 1.79
SHROOM1-202ENST00000378676 CLTCL1P53675 1640 aa26.26■■□□□ 1.79
SHROOM1-202ENST00000378676 ARAP3Q8WWN8 1544 aa26.26■■□□□ 1.79
SHROOM1-202ENST00000378676 SPAG9O60271 1321 aaKnown RBP26.22■■□□□ 1.79
SHROOM1-202ENST00000378676 TET3O43151 1660 aa26.22■■□□□ 1.79
SHROOM1-202ENST00000378676 INO80Q9ULG1 1556 aaPredicted RBP26.21■■□□□ 1.79
SHROOM1-202ENST00000378676 ABCA9Q8IUA7 1624 aa26.21■■□□□ 1.79
SHROOM1-202ENST00000378676 RTEL1-TNFRSF6BF6WH68 1400 aa26.21■■□□□ 1.79
SHROOM1-202ENST00000378676 CC2D1BQ5T0F9 858 aaKnown RBP26.2■■□□□ 1.79
SHROOM1-202ENST00000378676 AFAP1Q8N556 730 aa26.2■■□□□ 1.78
SHROOM1-202ENST00000378676 PANK3Q9H999 370 aa26.2■■□□□ 1.78
SHROOM1-202ENST00000378676 TMF1P82094 1093 aa26.19■■□□□ 1.78
SHROOM1-202ENST00000378676 SALL2Q9Y467 1007 aaPredicted RBP26.18■■□□□ 1.78
SHROOM1-202ENST00000378676 ATP7AQ04656 1500 aa26.18■■□□□ 1.78
SHROOM1-202ENST00000378676 CCDC136Q96JN2 1154 aa26.17■■□□□ 1.78
SHROOM1-202ENST00000378676 WASHC2CQ9Y4E1 1318 aa26.16■■□□□ 1.78
SHROOM1-202ENST00000378676 PTPRTO14522 1441 aa26.15■■□□□ 1.78
SHROOM1-202ENST00000378676 BLMP54132 1417 aaPredicted RBP26.15■■□□□ 1.78
SHROOM1-202ENST00000378676 WDR7Q9Y4E6 1490 aa26.15■■□□□ 1.78
SHROOM1-202ENST00000378676 VWDEQ8N2E2 1590 aa26.14■■□□□ 1.78
SHROOM1-202ENST00000378676 MYOM1P52179 1685 aa26.12■■□□□ 1.77
SHROOM1-202ENST00000378676 RRP1P56182 461 aaKnown RBP26.12■■□□□ 1.77
SHROOM1-202ENST00000378676 ZMYM4Q5VZL5 1548 aa26.11■■□□□ 1.77
SHROOM1-202ENST00000378676 FANCAO15360 1455 aa26.11■■□□□ 1.77
SHROOM1-202ENST00000378676 MROH1Q8NDA8 1641 aa26.11■■□□□ 1.77
SHROOM1-202ENST00000378676 SYNMO15061 1565 aa26.09■■□□□ 1.77
SHROOM1-202ENST00000378676 KIAA1210Q9ULL0 1709 aa26.08■■□□□ 1.77
SHROOM1-202ENST00000378676 RCAN3Q9UKA8 241 aa26.08■■□□□ 1.77
SHROOM1-202ENST00000378676 SCAF11Q99590 1463 aaKnown RBP26.08■■□□□ 1.76
SHROOM1-202ENST00000378676 INSRP06213 1382 aa26.06■■□□□ 1.76
SHROOM1-202ENST00000378676 PDE3BQ13370 1112 aa26.06■■□□□ 1.76
SHROOM1-202ENST00000378676 CDCA7LQ96GN5 454 aa26.06■■□□□ 1.76
SHROOM1-202ENST00000378676 SCAPERQ9BY12 1400 aa26.06■■□□□ 1.76
SHROOM1-202ENST00000378676 UGGT1Q9NYU2 1555 aa26.05■■□□□ 1.76
SHROOM1-202ENST00000378676 ADGRL1O94910 1474 aa26.04■■□□□ 1.76
SHROOM1-202ENST00000378676 NPM1P06748 294 aaKnown RBP eCLIP26.03■■□□□ 1.76
SHROOM1-202ENST00000378676 EXOC6Q8TAG9 804 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms