RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 GGT6Q6P531 493 aa30.4■■■□□ 2.46
RER1-204ENST00000378518 CNTLNQ9NXG0 1405 aa30.38■■■□□ 2.45
RER1-204ENST00000378518 CLTCQ00610 1675 aaKnown RBP30.36■■■□□ 2.45
RER1-204ENST00000378518 PPP6R1Q9UPN7 881 aa30.36■■■□□ 2.45
RER1-204ENST00000378518 MROH2AA6NES4 1674 aa30.36■■■□□ 2.45
RER1-204ENST00000378518 FAM135AQ9P2D6 1515 aa30.35■■■□□ 2.45
RER1-204ENST00000378518 ANKRD50Q9ULJ7 1429 aa30.3■■■□□ 2.44
RER1-204ENST00000378518 ZC3H13Q5T200 1668 aaKnown RBP30.3■■■□□ 2.44
RER1-204ENST00000378518 DEPDC5O75140 1603 aa30.3■■■□□ 2.44
RER1-204ENST00000378518 KDM5DQ9BY66 1539 aa30.3■■■□□ 2.44
RER1-204ENST00000378518 C3P01024 1663 aa30.3■■■□□ 2.44
RER1-204ENST00000378518 MROH1Q8NDA8 1641 aa30.28■■■□□ 2.44
RER1-204ENST00000378518 PRDM15P57071 1507 aaPredicted RBP30.27■■■□□ 2.44
RER1-204ENST00000378518 GCC2Q8IWJ2 1684 aa30.27■■■□□ 2.44
RER1-204ENST00000378518 PLPPR3Q6T4P5 718 aa30.25■■■□□ 2.43
RER1-204ENST00000378518 CEP152O94986 1710 aa30.24■■■□□ 2.43
RER1-204ENST00000378518 WASHC2CQ9Y4E1 1318 aa30.23■■■□□ 2.43
RER1-204ENST00000378518 KANK1Q14678 1352 aa30.21■■■□□ 2.43
RER1-204ENST00000378518 ZMYM3Q14202 1370 aa30.19■■■□□ 2.42
RER1-204ENST00000378518 ABCC3O15438 1527 aa30.19■■■□□ 2.42
RER1-204ENST00000378518 UNC13BO14795 1591 aa30.18■■■□□ 2.42
RER1-204ENST00000378518 CEBPAP49715 358 aaPredicted RBP30.17■■■□□ 2.42
RER1-204ENST00000378518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.17■■■□□ 2.421e-6■□□□□ 9.9
RER1-204ENST00000378518 HFM1A2PYH4 1435 aa30.16■■■□□ 2.42
RER1-204ENST00000378518 CAMSAP1Q5T5Y3 1602 aa30.16■■■□□ 2.42
RER1-204ENST00000378518 NAIPQ13075 1403 aa30.15■■■□□ 2.42
RER1-204ENST00000378518 VWDEQ8N2E2 1590 aa30.12■■■□□ 2.41
RER1-204ENST00000378518 SETD1BQ9UPS6 1966 aaKnown RBP30.12■■■□□ 2.41
RER1-204ENST00000378518 PREX1Q8TCU6 1659 aa30.11■■■□□ 2.41
RER1-204ENST00000378518 PZPP20742 1482 aa30.1■■■□□ 2.41
RER1-204ENST00000378518 NPATQ14207 1427 aa30.09■■■□□ 2.41
RER1-204ENST00000378518 LMTK2Q8IWU2 1503 aa30.08■■■□□ 2.41
RER1-204ENST00000378518 IQGAP3Q86VI3 1631 aa30.06■■■□□ 2.4
RER1-204ENST00000378518 TET3O43151 1660 aa30.04■■■□□ 2.4
RER1-204ENST00000378518 CFAP65Q6ZU64 1925 aaKnown RBP30.02■■■□□ 2.4
RER1-204ENST00000378518 EFCAB6Q5THR3 1501 aa30.01■■■□□ 2.4
RER1-204ENST00000378518 ARHGAP31Q2M1Z3 1444 aa30.01■■■□□ 2.39
RER1-204ENST00000378518 UHRF1BP1Q6BDS2 1440 aa30■■■□□ 2.39
RER1-204ENST00000378518 NUP155O75694 1391 aa30■■■□□ 2.39
RER1-204ENST00000378518 MYO3AQ8NEV4 1616 aa30■■■□□ 2.39
RER1-204ENST00000378518 SPATA31D1Q6ZQQ2 1576 aa29.97■■■□□ 2.39
RER1-204ENST00000378518 LMTK3Q96Q04 1460 aa29.96■■■□□ 2.39
RER1-204ENST00000378518 ERVK-7P63135 1459 aa29.95■■■□□ 2.39
RER1-204ENST00000378518 SETD5Q9C0A6 1442 aa29.95■■■□□ 2.38
RER1-204ENST00000378518 TNRQ92752 1358 aa29.94■■■□□ 2.38
RER1-204ENST00000378518 FBXO31Q5XUX0 539 aaPredicted RBP29.94■■■□□ 2.38
RER1-204ENST00000378518 ZNF142P52746 1687 aaPredicted RBP29.93■■■□□ 2.38
RER1-204ENST00000378518 RPRD2Q5VT52 1461 aaKnown RBP29.93■■■□□ 2.38
RER1-204ENST00000378518 E9PCH4 1651 aa29.91■■■□□ 2.38
RER1-204ENST00000378518 ACIN1Q9UKV3 1341 aaKnown RBP29.91■■■□□ 2.38
RER1-204ENST00000378518 TRIM52Q96A61 297 aa29.9■■■□□ 2.38
RER1-204ENST00000378518 CEP170BQ9Y4F5 1589 aaPredicted RBP29.89■■■□□ 2.38
RER1-204ENST00000378518 NLRP1Q9C000 1473 aa29.87■■■□□ 2.37
RER1-204ENST00000378518 A2ML1A8K2U0 1454 aa29.84■■■□□ 2.37
RER1-204ENST00000378518 RAB3GAP2Q9H2M9 1393 aa29.83■■■□□ 2.37
RER1-204ENST00000378518 NOS1P29475 1434 aa29.8■■■□□ 2.36
RER1-204ENST00000378518 SYNMO15061 1565 aa29.79■■■□□ 2.36
RER1-204ENST00000378518 TRIM26Q12899 539 aaPredicted RBP29.79■■■□□ 2.36
RER1-204ENST00000378518 SPHKAPQ2M3C7 1700 aa29.79■■■□□ 2.36
RER1-204ENST00000378518 HSPA2P54652 639 aa29.78■■■□□ 2.36
RER1-204ENST00000378518 SLC4A1APQ9BWU0 796 aaKnown RBP29.76■■■□□ 2.35
RER1-204ENST00000378518 UGGT1Q9NYU2 1555 aa29.76■■■□□ 2.35
RER1-204ENST00000378518 PIK3C2BO00750 1634 aa29.74■■■□□ 2.35
RER1-204ENST00000378518 UBR1Q8IWV7 1749 aa29.73■■■□□ 2.35
RER1-204ENST00000378518 KDM5AP29375 1690 aaKnown RBP29.72■■■□□ 2.35
RER1-204ENST00000378518 HRCP23327 699 aa29.71■■■□□ 2.35
RER1-204ENST00000378518 SLC52A1Q9NWF4 448 aa29.7■■■□□ 2.35
RER1-204ENST00000378518 PKD2Q13563 968 aa29.69■■■□□ 2.34
RER1-204ENST00000378518 PLA2R1Q13018 1463 aa29.68■■■□□ 2.34
RER1-204ENST00000378518 THEMISQ8N1K5 641 aaPredicted RBP29.67■■■□□ 2.34
RER1-204ENST00000378518 MPHOSPH9Q99550 1183 aa29.66■■■□□ 2.34
RER1-204ENST00000378518 STAG3Q9UJ98 1225 aa29.66■■■□□ 2.34
RER1-204ENST00000378518 STRCQ7RTU9 1775 aa29.66■■■□□ 2.34
RER1-204ENST00000378518 PTPRTO14522 1441 aa29.65■■■□□ 2.34
RER1-204ENST00000378518 IDI1Q13907 227 aa29.65■■■□□ 2.34
RER1-204ENST00000378518 ADGRB3O60242 1522 aa29.65■■■□□ 2.34
RER1-204ENST00000378518 TRPM2O94759 1503 aa29.65■■■□□ 2.34
RER1-204ENST00000378518 POLR1AO95602 1720 aaPredicted RBP29.64■■■□□ 2.34
RER1-204ENST00000378518 MYO5BQ9ULV0 1848 aa29.61■■■□□ 2.33
RER1-204ENST00000378518 KIF1BO60333 1816 aa29.58■■■□□ 2.33
RER1-204ENST00000378518 TMEM131LA2VDJ0 1609 aa29.57■■■□□ 2.32
RER1-204ENST00000378518 CLTCL1P53675 1640 aa29.57■■■□□ 2.32
RER1-204ENST00000378518 DMRT2Q9Y5R5 561 aa29.55■■■□□ 2.32
RER1-204ENST00000378518 SLIT1O75093 1534 aa29.54■■■□□ 2.32
RER1-204ENST00000378518 CHGAP10645 457 aaKnown RBP29.53■■■□□ 2.32
RER1-204ENST00000378518 FOXD1Q16676 465 aa29.53■■■□□ 2.32
RER1-204ENST00000378518 ANKLE2Q86XL3 938 aa29.52■■■□□ 2.32
RER1-204ENST00000378518 NCKAP5LQ9HCH0 1330 aa29.51■■■□□ 2.32
RER1-204ENST00000378518 ARHGAP23Q9P227 1491 aa29.51■■■□□ 2.31
RER1-204ENST00000378518 TMEM2Q9UHN6 1383 aa29.5■■■□□ 2.31
RER1-204ENST00000378518 NEURL4Q96JN8 1562 aa29.47■■■□□ 2.31
RER1-204ENST00000378518 CCDC144AA2RUR9 1427 aa29.47■■■□□ 2.31
RER1-204ENST00000378518 EID1Q9Y6B2 187 aa29.47■■■□□ 2.31
RER1-204ENST00000378518 SCAF11Q99590 1463 aaKnown RBP29.47■■■□□ 2.31
RER1-204ENST00000378518 IQGAP1P46940 1657 aa29.45■■■□□ 2.31
RER1-204ENST00000378518 TXNDC2Q86VQ3 553 aa29.43■■■□□ 2.3
RER1-204ENST00000378518 MED14O60244 1454 aa29.42■■■□□ 2.3
RER1-204ENST00000378518 HDGFP51858 240 aaKnown RBP29.42■■■□□ 2.3
RER1-204ENST00000378518 NPHP4O75161 1426 aaPredicted RBP29.41■■■□□ 2.3
RER1-204ENST00000378518 RIMS2Q9UQ26 1411 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms