RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.42■■■□□ 2.94
GFRA3-202ENST00000378362 WASHC2CQ9Y4E1 1318 aa33.41■■■□□ 2.94
GFRA3-202ENST00000378362 ADGRL2O95490 1459 aa33.39■■■□□ 2.94
GFRA3-202ENST00000378362 CNTLNQ9NXG0 1405 aa33.38■■■□□ 2.93
GFRA3-202ENST00000378362 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.37■■■□□ 2.93
GFRA3-202ENST00000378362 ERBINQ96RT1 1412 aa33.34■■■□□ 2.93
GFRA3-202ENST00000378362 HSPA2P54652 639 aa33.34■■■□□ 2.93
GFRA3-202ENST00000378362 PPP6R1Q9UPN7 881 aa33.34■■■□□ 2.93
GFRA3-202ENST00000378362 EIF2AK4Q9P2K8 1649 aaKnown RBP33.33■■■□□ 2.93
GFRA3-202ENST00000378362 FBXO31Q5XUX0 539 aaPredicted RBP33.32■■■□□ 2.92
GFRA3-202ENST00000378362 MROH1Q8NDA8 1641 aa33.32■■■□□ 2.92
GFRA3-202ENST00000378362 RNF17Q9BXT8 1623 aaKnown RBP33.32■■■□□ 2.92
GFRA3-202ENST00000378362 ANKRD50Q9ULJ7 1429 aa33.29■■■□□ 2.92
GFRA3-202ENST00000378362 MROH2AA6NES4 1674 aa33.29■■■□□ 2.92
GFRA3-202ENST00000378362 LMTK3Q96Q04 1460 aa33.29■■■□□ 2.92
GFRA3-202ENST00000378362 KDM5DQ9BY66 1539 aa33.28■■■□□ 2.92
GFRA3-202ENST00000378362 SETD1BQ9UPS6 1966 aaKnown RBP33.26■■■□□ 2.92
GFRA3-202ENST00000378362 CFAP65Q6ZU64 1925 aaKnown RBP33.26■■■□□ 2.91
GFRA3-202ENST00000378362 ROCK1Q13464 1354 aa33.25■■■□□ 2.91
GFRA3-202ENST00000378362 CEP152O94986 1710 aa33.24■■■□□ 2.91
GFRA3-202ENST00000378362 ABCC3O15438 1527 aa33.24■■■□□ 2.91
GFRA3-202ENST00000378362 PRDM15P57071 1507 aaPredicted RBP33.18■■■□□ 2.9
GFRA3-202ENST00000378362 PREX1Q8TCU6 1659 aa33.17■■■□□ 2.9
GFRA3-202ENST00000378362 DEPDC5O75140 1603 aa33.17■■■□□ 2.9
GFRA3-202ENST00000378362 UHRF1BP1Q6BDS2 1440 aa33.16■■■□□ 2.9
GFRA3-202ENST00000378362 NPATQ14207 1427 aa33.14■■■□□ 2.9
GFRA3-202ENST00000378362 KANK1Q14678 1352 aa33.14■■■□□ 2.9
GFRA3-202ENST00000378362 PZPP20742 1482 aa33.13■■■□□ 2.89
GFRA3-202ENST00000378362 CAMSAP1Q5T5Y3 1602 aa33.11■■■□□ 2.89
GFRA3-202ENST00000378362 FAM135AQ9P2D6 1515 aa33.1■■■□□ 2.89
GFRA3-202ENST00000378362 ZC3H13Q5T200 1668 aaKnown RBP33.1■■■□□ 2.89
GFRA3-202ENST00000378362 NAIPQ13075 1403 aa33.08■■■□□ 2.89
GFRA3-202ENST00000378362 TNRQ92752 1358 aa33.07■■■□□ 2.88
GFRA3-202ENST00000378362 VWDEQ8N2E2 1590 aa33.05■■■□□ 2.88
GFRA3-202ENST00000378362 MYO3AQ8NEV4 1616 aa33.04■■■□□ 2.88
GFRA3-202ENST00000378362 NUP155O75694 1391 aa33.03■■■□□ 2.88
GFRA3-202ENST00000378362 ERVK-7P63135 1459 aa33■■■□□ 2.87
GFRA3-202ENST00000378362 UNC13BO14795 1591 aa32.99■■■□□ 2.87
GFRA3-202ENST00000378362 HFM1A2PYH4 1435 aa32.97■■■□□ 2.87
GFRA3-202ENST00000378362 LMTK2Q8IWU2 1503 aa32.97■■■□□ 2.87
GFRA3-202ENST00000378362 CEP170BQ9Y4F5 1589 aaPredicted RBP32.96■■■□□ 2.87
GFRA3-202ENST00000378362 GCC2Q8IWJ2 1684 aa32.96■■■□□ 2.87
GFRA3-202ENST00000378362 ARHGAP31Q2M1Z3 1444 aa32.95■■■□□ 2.87
GFRA3-202ENST00000378362 SPATA31D1Q6ZQQ2 1576 aa32.94■■■□□ 2.86
GFRA3-202ENST00000378362 TRIM52Q96A61 297 aa32.93■■■□□ 2.86
GFRA3-202ENST00000378362 EFCAB6Q5THR3 1501 aa32.93■■■□□ 2.86
GFRA3-202ENST00000378362 A2ML1A8K2U0 1454 aa32.9■■■□□ 2.86
GFRA3-202ENST00000378362 STRCQ7RTU9 1775 aa32.89■■■□□ 2.86
GFRA3-202ENST00000378362 NCKAP5LQ9HCH0 1330 aa32.89■■■□□ 2.86
GFRA3-202ENST00000378362 ZNF142P52746 1687 aaPredicted RBP32.89■■■□□ 2.86
GFRA3-202ENST00000378362 IQGAP3Q86VI3 1631 aa32.87■■■□□ 2.85
GFRA3-202ENST00000378362 TET3O43151 1660 aa32.87■■■□□ 2.85
GFRA3-202ENST00000378362 IDI1Q13907 227 aa32.84■■■□□ 2.85
GFRA3-202ENST00000378362 NLRP1Q9C000 1473 aa32.83■■■□□ 2.85
GFRA3-202ENST00000378362 E9PCH4 1651 aa32.83■■■□□ 2.85
GFRA3-202ENST00000378362 SYNMO15061 1565 aa32.82■■■□□ 2.84
GFRA3-202ENST00000378362 UGGT1Q9NYU2 1555 aa32.82■■■□□ 2.84
GFRA3-202ENST00000378362 NOS1P29475 1434 aa32.8■■■□□ 2.84
GFRA3-202ENST00000378362 THEMISQ8N1K5 641 aaPredicted RBP32.78■■■□□ 2.84
GFRA3-202ENST00000378362 STAG3Q9UJ98 1225 aa32.76■■■□□ 2.83
GFRA3-202ENST00000378362 RPRD2Q5VT52 1461 aaKnown RBP32.75■■■□□ 2.83
GFRA3-202ENST00000378362 SETD5Q9C0A6 1442 aa32.75■■■□□ 2.83
GFRA3-202ENST00000378362 PIK3C2BO00750 1634 aa32.75■■■□□ 2.83
GFRA3-202ENST00000378362 FOXD1Q16676 465 aa32.74■■■□□ 2.83
GFRA3-202ENST00000378362 SLC4A1APQ9BWU0 796 aaKnown RBP32.74■■■□□ 2.83
GFRA3-202ENST00000378362 PKD2Q13563 968 aa32.72■■■□□ 2.83
GFRA3-202ENST00000378362 UBR1Q8IWV7 1749 aa32.72■■■□□ 2.83
GFRA3-202ENST00000378362 RAB3GAP2Q9H2M9 1393 aa32.7■■■□□ 2.83
GFRA3-202ENST00000378362 CHGAP10645 457 aaKnown RBP32.69■■■□□ 2.82
GFRA3-202ENST00000378362 PLA2R1Q13018 1463 aa32.68■■■□□ 2.82
GFRA3-202ENST00000378362 SENP3Q9H4L4 574 aaPredicted RBP32.68■■■□□ 2.82
GFRA3-202ENST00000378362 SLC52A1Q9NWF4 448 aa32.67■■■□□ 2.82
GFRA3-202ENST00000378362 ANKLE2Q86XL3 938 aa32.67■■■□□ 2.82
GFRA3-202ENST00000378362 DMRT2Q9Y5R5 561 aa32.67■■■□□ 2.82
GFRA3-202ENST00000378362 LTKP29376 864 aa32.64■■■□□ 2.82
GFRA3-202ENST00000378362 MPHOSPH9Q99550 1183 aa32.62■■■□□ 2.81
GFRA3-202ENST00000378362 MYO5BQ9ULV0 1848 aa32.61■■■□□ 2.81
GFRA3-202ENST00000378362 TXNDC2Q86VQ3 553 aa32.61■■■□□ 2.81
GFRA3-202ENST00000378362 NEURL4Q96JN8 1562 aa32.59■■■□□ 2.81
GFRA3-202ENST00000378362 PTPRTO14522 1441 aa32.59■■■□□ 2.81
GFRA3-202ENST00000378362 POLR1AO95602 1720 aaPredicted RBP32.58■■■□□ 2.81
GFRA3-202ENST00000378362 SPHKAPQ2M3C7 1700 aa32.58■■■□□ 2.81
GFRA3-202ENST00000378362 NUTM2DQ5VT03 806 aaPredicted RBP32.58■■■□□ 2.81
GFRA3-202ENST00000378362 TMEM2Q9UHN6 1383 aa32.56■■■□□ 2.8
GFRA3-202ENST00000378362 ADGRB3O60242 1522 aa32.56■■■□□ 2.8
GFRA3-202ENST00000378362 ZNF335Q9H4Z2 1342 aaPredicted RBP32.53■■■□□ 2.8
GFRA3-202ENST00000378362 ARHGAP23Q9P227 1491 aa32.52■■■□□ 2.8
GFRA3-202ENST00000378362 TMEM131LA2VDJ0 1609 aa32.52■■■□□ 2.8
GFRA3-202ENST00000378362 EID1Q9Y6B2 187 aa32.51■■■□□ 2.8
GFRA3-202ENST00000378362 SLIT1O75093 1534 aa32.51■■■□□ 2.8
GFRA3-202ENST00000378362 NPHP4O75161 1426 aaPredicted RBP32.51■■■□□ 2.8
GFRA3-202ENST00000378362 SCAF11Q99590 1463 aaKnown RBP32.5■■■□□ 2.79
GFRA3-202ENST00000378362 CLTCL1P53675 1640 aa32.48■■■□□ 2.79
GFRA3-202ENST00000378362 KDM5AP29375 1690 aaKnown RBP32.46■■■□□ 2.79
GFRA3-202ENST00000378362 TRPM2O94759 1503 aa32.45■■■□□ 2.79
GFRA3-202ENST00000378362 MED14O60244 1454 aa32.45■■■□□ 2.78
GFRA3-202ENST00000378362 ZNF326Q5BKZ1 582 aaKnown RBP32.44■■■□□ 2.78
GFRA3-202ENST00000378362 IQGAP1P46940 1657 aa32.43■■■□□ 2.78
GFRA3-202ENST00000378362 BCANQ96GW7 911 aa32.43■■■□□ 2.78
GFRA3-202ENST00000378362 RIMS2Q9UQ26 1411 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms