RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 RTF1Q92541 710 aaKnown RBP7.53□□□□□ -1.2
CUBN-202ENST00000377833 HSP90B1P14625 803 aaKnown RBP7.53□□□□□ -1.2
CUBN-202ENST00000377833 CFAP74Q9C0B2 1584 aa7.53□□□□□ -1.2
CUBN-202ENST00000377833 KAT6BQ8WYB5 2073 aa7.52□□□□□ -1.2
CUBN-202ENST00000377833 KCNJ4P48050 445 aa7.52□□□□□ -1.2
CUBN-202ENST00000377833 GNL2Q13823 731 aaKnown RBP7.52□□□□□ -1.21
CUBN-202ENST00000377833 NOP58Q9Y2X3 529 aaKnown RBP7.52□□□□□ -1.21
CUBN-202ENST00000377833 STK31Q9BXU1 1019 aa7.52□□□□□ -1.21
CUBN-202ENST00000377833 POLA1P09884 1462 aaPredicted RBP7.52□□□□□ -1.21
CUBN-202ENST00000377833 RRP7BPQ9NSQ0 103 aa7.52□□□□□ -1.21
CUBN-202ENST00000377833 NPHP1O15259 732 aa7.52□□□□□ -1.21
CUBN-202ENST00000377833 SKOR2Q2VWA4 1001 aaPredicted RBP7.52□□□□□ -1.21
CUBN-202ENST00000377833 RAB3GAP2Q9H2M9 1393 aa7.52□□□□□ -1.21
CUBN-202ENST00000377833 TPM3P06753 285 aa7.52□□□□□ -1.21
CUBN-202ENST00000377833 ARID3CA6NKF2 412 aa7.51□□□□□ -1.21
CUBN-202ENST00000377833 EID1Q9Y6B2 187 aa7.51□□□□□ -1.21
CUBN-202ENST00000377833 ZBED9Q6R2W3 1325 aa7.51□□□□□ -1.21
CUBN-202ENST00000377833 AKNAQ7Z591 1439 aa7.51□□□□□ -1.21
CUBN-202ENST00000377833 LRRC9Q6ZRR7 1453 aa7.5□□□□□ -1.21
CUBN-202ENST00000377833 ST18O60284 1047 aa7.5□□□□□ -1.21
CUBN-202ENST00000377833 HSP90AB1P08238 724 aaKnown RBP7.5□□□□□ -1.21
CUBN-202ENST00000377833 DNTTIP2Q5QJE6 756 aaKnown RBP7.5□□□□□ -1.21
CUBN-202ENST00000377833 SMG6Q86US8 1419 aaKnown RBP7.5□□□□□ -1.21
CUBN-202ENST00000377833 ARHGAP5Q13017 1502 aa7.5□□□□□ -1.21
CUBN-202ENST00000377833 ADGBQ8N7X0 1667 aa7.5□□□□□ -1.21
CUBN-202ENST00000377833 MORC1Q86VD1 984 aa7.5□□□□□ -1.21
CUBN-202ENST00000377833 MYBBP1AQ9BQG0 1328 aaKnown RBP7.5□□□□□ -1.21
CUBN-202ENST00000377833 POGZQ7Z3K3 1410 aa7.49□□□□□ -1.21
CUBN-202ENST00000377833 KIF7Q2M1P5 1343 aa7.49□□□□□ -1.21
CUBN-202ENST00000377833 ABCA10Q8WWZ4 1543 aa7.49□□□□□ -1.21
CUBN-202ENST00000377833 CCDC70Q6NSX1 233 aa7.49□□□□□ -1.21
CUBN-202ENST00000377833 REC8O95072 547 aa7.48□□□□□ -1.21
CUBN-202ENST00000377833 CT47B1P0C2W7 299 aaPredicted RBP7.48□□□□□ -1.21
CUBN-202ENST00000377833 SMC4Q9NTJ3 1288 aa7.48□□□□□ -1.21
CUBN-202ENST00000377833 EVC2Q86UK5 1308 aa7.48□□□□□ -1.21
CUBN-202ENST00000377833 HOOK1Q9UJC3 728 aaKnown RBP7.48□□□□□ -1.21
CUBN-202ENST00000377833 EPRSP07814 1512 aaKnown RBP7.48□□□□□ -1.21
CUBN-202ENST00000377833 MTERF4Q7Z6M4 381 aaKnown RBP7.47□□□□□ -1.21
CUBN-202ENST00000377833 USP47Q96K76 1375 aa7.47□□□□□ -1.21
CUBN-202ENST00000377833 VGFO15240 615 aaPredicted RBP7.47□□□□□ -1.21
CUBN-202ENST00000377833 KDM2AQ9Y2K7 1162 aa7.47□□□□□ -1.21
CUBN-202ENST00000377833 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.47□□□□□ -1.21
CUBN-202ENST00000377833 PTPRGP23470 1445 aa7.46□□□□□ -1.21
CUBN-202ENST00000377833 RDXP35241 583 aaKnown RBP7.46□□□□□ -1.22
CUBN-202ENST00000377833 CENPJQ9HC77 1338 aaPredicted RBP7.46□□□□□ -1.22
CUBN-202ENST00000377833 ISY1Q9ULR0 285 aaKnown RBP7.46□□□□□ -1.22
CUBN-202ENST00000377833 PTPN23Q9H3S7 1636 aa7.45□□□□□ -1.22
CUBN-202ENST00000377833 GPS2Q13227 327 aa7.45□□□□□ -1.22
CUBN-202ENST00000377833 TPM1P09493 284 aa7.45□□□□□ -1.22
CUBN-202ENST00000377833 SRPK2P78362 688 aaKnown RBP7.45□□□□□ -1.22
CUBN-202ENST00000377833 AMOTL1Q8IY63 956 aa7.45□□□□□ -1.22
CUBN-202ENST00000377833 DCAF11Q8TEB1 546 aa7.44□□□□□ -1.22
CUBN-202ENST00000377833 A0A0U1RQG5 324 aaPredicted RBP7.44□□□□□ -1.22
CUBN-202ENST00000377833 HSP90AB4PQ58FF6 505 aa7.44□□□□□ -1.22
CUBN-202ENST00000377833 TPM2P07951 284 aa7.44□□□□□ -1.22
CUBN-202ENST00000377833 ANKRD20A12PQ8NF67 263 aa7.44□□□□□ -1.22
CUBN-202ENST00000377833 ZNF428Q96B54 188 aa7.44□□□□□ -1.22
CUBN-202ENST00000377833 TXLNBQ8N3L3 684 aa7.44□□□□□ -1.22
CUBN-202ENST00000377833 E9PSI1 815 aa7.43□□□□□ -1.22
CUBN-202ENST00000377833 RUFY2Q8WXA3 655 aa7.43□□□□□ -1.22
CUBN-202ENST00000377833 MFAP1P55081 439 aaKnown RBP7.43□□□□□ -1.22
CUBN-202ENST00000377833 BRD4O60885 1362 aaPredicted RBP7.43□□□□□ -1.22
CUBN-202ENST00000377833 TOPBP1Q92547 1522 aa7.43□□□□□ -1.22
CUBN-202ENST00000377833 KCNH8Q96L42 1107 aa7.43□□□□□ -1.22
CUBN-202ENST00000377833 CENPQQ7L2Z9 268 aaPredicted RBP7.43□□□□□ -1.22
CUBN-202ENST00000377833 PKD2Q13563 968 aa7.43□□□□□ -1.22
CUBN-202ENST00000377833 FOXD1Q16676 465 aa7.42□□□□□ -1.22
CUBN-202ENST00000377833 ANKRD50Q9ULJ7 1429 aa7.42□□□□□ -1.22
CUBN-202ENST00000377833 ARHGEF12Q9NZN5 1544 aa7.42□□□□□ -1.22
CUBN-202ENST00000377833 CCP110O43303 1012 aa7.42□□□□□ -1.22
CUBN-202ENST00000377833 IPO7O95373 1038 aaKnown RBP7.42□□□□□ -1.22
CUBN-202ENST00000377833 PBRM1Q86U86 1689 aa7.42□□□□□ -1.22
CUBN-202ENST00000377833 NEXNQ0ZGT2 675 aa7.41□□□□□ -1.22
CUBN-202ENST00000377833 NOC3LQ8WTT2 800 aaKnown RBP7.41□□□□□ -1.22
CUBN-202ENST00000377833 PIP4K2AP48426 406 aaPredicted RBP7.41□□□□□ -1.22
CUBN-202ENST00000377833 DDX19BQ9UMR2 479 aa7.41□□□□□ -1.22
CUBN-202ENST00000377833 LAS1LQ9Y4W2 734 aaKnown RBP7.41□□□□□ -1.22
CUBN-202ENST00000377833 KIAA0586Q9BVV6 1533 aa7.41□□□□□ -1.22
CUBN-202ENST00000377833 SETQ01105 290 aaPredicted RBP7.41□□□□□ -1.22
CUBN-202ENST00000377833 RNF20Q5VTR2 975 aa7.41□□□□□ -1.22
CUBN-202ENST00000377833 RCAN3Q9UKA8 241 aa7.4□□□□□ -1.22
CUBN-202ENST00000377833 CDR1P51861 262 aa7.4□□□□□ -1.22
CUBN-202ENST00000377833 TSR1Q2NL82 804 aaKnown RBP7.4□□□□□ -1.22
CUBN-202ENST00000377833 NSD2O96028 1365 aa7.4□□□□□ -1.22
CUBN-202ENST00000377833 CPLX2Q6PUV4 134 aaKnown RBP7.4□□□□□ -1.23
CUBN-202ENST00000377833 MIER1Q8N108 512 aa7.4□□□□□ -1.23
CUBN-202ENST00000377833 TROQ12816 1431 aaPredicted RBP7.4□□□□□ -1.23
CUBN-202ENST00000377833 MYO6Q9UM54 1294 aa7.4□□□□□ -1.23
CUBN-202ENST00000377833 PKNOX2Q96KN3 472 aa7.39□□□□□ -1.23
CUBN-202ENST00000377833 SHANK2Q9UPX8 1470 aa7.39□□□□□ -1.23
CUBN-202ENST00000377833 GOLGA6L3A6NEY3 463 aa7.39□□□□□ -1.23
CUBN-202ENST00000377833 C9orf84Q5VXU9 1444 aa7.39□□□□□ -1.23
CUBN-202ENST00000377833 GCC2Q8IWJ2 1684 aa7.39□□□□□ -1.23
CUBN-202ENST00000377833 NAT10Q9H0A0 1025 aaKnown RBP7.39□□□□□ -1.23
CUBN-202ENST00000377833 PRKCSHP14314 528 aaPredicted RBP7.39□□□□□ -1.23
CUBN-202ENST00000377833 RSPH6AQ9H0K4 717 aa7.39□□□□□ -1.23
CUBN-202ENST00000377833 PCF11O94913 1555 aaKnown RBP7.39□□□□□ -1.23
CUBN-202ENST00000377833 DRC7Q8IY82 874 aa7.38□□□□□ -1.23
CUBN-202ENST00000377833 RAPGEF6Q8TEU7 1601 aa7.38□□□□□ -1.23
CUBN-202ENST00000377833 CAVIN1Q6NZI2 390 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms