RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 CLUAP1Q96AJ1 413 aa23.11■■□□□ 1.29
PTPDC1-202ENST00000375360 SCAPERQ9BY12 1400 aa23.1■■□□□ 1.29
PTPDC1-202ENST00000375360 GOLGA2Q08379 1002 aa23.1■■□□□ 1.29
PTPDC1-202ENST00000375360 NBPF8Q3BBV2 869 aa23.1■■□□□ 1.29
PTPDC1-202ENST00000375360 PLB1Q6P1J6 1458 aa23.08■■□□□ 1.28
PTPDC1-202ENST00000375360 CSB-PGBD3P0DP91 1061 aa23.08■■□□□ 1.28
PTPDC1-202ENST00000375360 MS4A1P11836 297 aa23.07■■□□□ 1.28
PTPDC1-202ENST00000375360 WASHC2AQ641Q2 1341 aa23.07■■□□□ 1.28
PTPDC1-202ENST00000375360 EVC2Q86UK5 1308 aa23.07■■□□□ 1.28
PTPDC1-202ENST00000375360 EPRSP07814 1512 aaKnown RBP23.06■■□□□ 1.28
PTPDC1-202ENST00000375360 APBB1O00213 710 aa23.06■■□□□ 1.28
PTPDC1-202ENST00000375360 C9orf84Q5VXU9 1444 aa23.06■■□□□ 1.28
PTPDC1-202ENST00000375360 AMPHP49418 695 aa23.04■■□□□ 1.28
PTPDC1-202ENST00000375360 CCDC7Q96M83 1385 aa23.04■■□□□ 1.28
PTPDC1-202ENST00000375360 MIA2Q96PC5 1412 aa23.04■■□□□ 1.28
PTPDC1-202ENST00000375360 BECN1Q14457 450 aa23.02■■□□□ 1.28
PTPDC1-202ENST00000375360 CENPJQ9HC77 1338 aaPredicted RBP23.02■■□□□ 1.28
PTPDC1-202ENST00000375360 OS9Q13438 667 aaPredicted RBP23.01■■□□□ 1.27
PTPDC1-202ENST00000375360 HFM1A2PYH4 1435 aa23.01■■□□□ 1.27
PTPDC1-202ENST00000375360 EHBP1L1Q8N3D4 1523 aa23.01■■□□□ 1.27
PTPDC1-202ENST00000375360 ELL2O00472 640 aaPredicted RBP23.01■■□□□ 1.27
PTPDC1-202ENST00000375360 APAF1O14727 1248 aa23.01■■□□□ 1.27
PTPDC1-202ENST00000375360 BCL2L13Q9BXK5 485 aa23■■□□□ 1.27
PTPDC1-202ENST00000375360 CGNL1Q0VF96 1302 aa22.99■■□□□ 1.27
PTPDC1-202ENST00000375360 IQGAP2Q13576 1575 aa22.99■■□□□ 1.27
PTPDC1-202ENST00000375360 PLIN1O60240 522 aa22.98■■□□□ 1.27
PTPDC1-202ENST00000375360 ITPRIPQ8IWB1 547 aa22.98■■□□□ 1.27
PTPDC1-202ENST00000375360 DDRGK1Q96HY6 314 aa22.98■■□□□ 1.27
PTPDC1-202ENST00000375360 SMC4Q9NTJ3 1288 aa22.98■■□□□ 1.27
PTPDC1-202ENST00000375360 GRIN2AQ12879 1464 aa22.97■■□□□ 1.27
PTPDC1-202ENST00000375360 CHMP4BQ9H444 224 aaKnown RBP22.97■■□□□ 1.27
PTPDC1-202ENST00000375360 CABP2Q9NPB3 220 aa22.97■■□□□ 1.27
PTPDC1-202ENST00000375360 IPO8O15397 1037 aaKnown RBP22.96■■□□□ 1.27
PTPDC1-202ENST00000375360 DAPK1P53355 1430 aa22.96■■□□□ 1.27
PTPDC1-202ENST00000375360 ARHGEF11O15085 1522 aa22.96■■□□□ 1.27
PTPDC1-202ENST00000375360 NAIPQ13075 1403 aa22.95■■□□□ 1.27
PTPDC1-202ENST00000375360 ZNF330Q9Y3S2 320 aaPredicted RBP22.95■■□□□ 1.26
PTPDC1-202ENST00000375360 ANP32BQ92688 251 aaKnown RBP22.95■■□□□ 1.26
PTPDC1-202ENST00000375360 PCF11O94913 1555 aaKnown RBP22.94■■□□□ 1.26
PTPDC1-202ENST00000375360 COG3Q96JB2 828 aa22.94■■□□□ 1.26
PTPDC1-202ENST00000375360 GGNBP2Q9H3C7 697 aa22.93■■□□□ 1.26
PTPDC1-202ENST00000375360 PDE3BQ13370 1112 aa22.92■■□□□ 1.26
PTPDC1-202ENST00000375360 HECW1Q76N89 1606 aa22.92■■□□□ 1.26
PTPDC1-202ENST00000375360 RBM19Q9Y4C8 960 aaKnown RBP22.92■■□□□ 1.26
PTPDC1-202ENST00000375360 CALD1Q05682 793 aaKnown RBP22.91■■□□□ 1.26
PTPDC1-202ENST00000375360 KIAA1107Q9UPP5 1409 aa22.91■■□□□ 1.26
PTPDC1-202ENST00000375360 TPRNQ4KMQ1 711 aa22.9■■□□□ 1.26
PTPDC1-202ENST00000375360 CASC1Q6TDU7 716 aa22.9■■□□□ 1.26
PTPDC1-202ENST00000375360 NPHP1O15259 732 aa22.89■■□□□ 1.26
PTPDC1-202ENST00000375360 STAC3Q96MF2 364 aa22.88■■□□□ 1.25
PTPDC1-202ENST00000375360 SLC4A10Q6U841 1118 aa22.87■■□□□ 1.25
PTPDC1-202ENST00000375360 ZBED9Q6R2W3 1325 aa22.85■■□□□ 1.25
PTPDC1-202ENST00000375360 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
PTPDC1-202ENST00000375360 SLC12A5Q9H2X9 1139 aa22.84■■□□□ 1.25
PTPDC1-202ENST00000375360 ERICH6BQ5W0A0 696 aa22.84■■□□□ 1.25
PTPDC1-202ENST00000375360 STK31Q9BXU1 1019 aa22.84■■□□□ 1.25
PTPDC1-202ENST00000375360 TAOK2Q9UL54 1235 aa22.84■■□□□ 1.25
PTPDC1-202ENST00000375360 TCERG1O14776 1098 aaKnown RBP22.83■■□□□ 1.25
PTPDC1-202ENST00000375360 SUPT6HQ7KZ85 1726 aaKnown RBP22.82■■□□□ 1.24
PTPDC1-202ENST00000375360 NUTM2GQ5VZR2 741 aa22.82■■□□□ 1.24
PTPDC1-202ENST00000375360 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.82■■□□□ 1.24
PTPDC1-202ENST00000375360 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
PTPDC1-202ENST00000375360 TXNDC2Q86VQ3 553 aa22.82■■□□□ 1.24
PTPDC1-202ENST00000375360 CUL7Q14999 1698 aa22.82■■□□□ 1.24
PTPDC1-202ENST00000375360 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.81■■□□□ 1.24
PTPDC1-202ENST00000375360 SPRYD3Q8NCJ5 442 aa22.81■■□□□ 1.24
PTPDC1-202ENST00000375360 RWDD1Q9H446 243 aaPredicted RBP22.81■■□□□ 1.24
PTPDC1-202ENST00000375360 CCDC9Q9Y3X0 531 aaKnown RBP22.81■■□□□ 1.24
PTPDC1-202ENST00000375360 EXOC6Q8TAG9 804 aa22.81■■□□□ 1.24
PTPDC1-202ENST00000375360 DIAPH1O60610 1272 aaKnown RBP22.8■■□□□ 1.24
PTPDC1-202ENST00000375360 CNTLNQ9NXG0 1405 aa22.8■■□□□ 1.24
PTPDC1-202ENST00000375360 ABCC5O15440 1437 aa22.8■■□□□ 1.24
PTPDC1-202ENST00000375360 PRAM1Q96QH2 718 aa22.8■■□□□ 1.24
PTPDC1-202ENST00000375360 NCLP19338 710 aaKnown RBP22.8■■□□□ 1.24
PTPDC1-202ENST00000375360 KCNJ4P48050 445 aa22.79■■□□□ 1.24
PTPDC1-202ENST00000375360 ADAMTS8Q9UP79 889 aa22.79■■□□□ 1.24
PTPDC1-202ENST00000375360 HMOX1P09601 288 aa22.79■■□□□ 1.24
PTPDC1-202ENST00000375360 NOP58Q9Y2X3 529 aaKnown RBP22.78■■□□□ 1.24
PTPDC1-202ENST00000375360 MTHFSP49914 203 aa22.78■■□□□ 1.24
PTPDC1-202ENST00000375360 PLEKHH2Q8IVE3 1493 aa22.78■■□□□ 1.24
PTPDC1-202ENST00000375360 PSME1Q06323 249 aa22.77■■□□□ 1.24
PTPDC1-202ENST00000375360 CCDC184Q52MB2 194 aa22.76■■□□□ 1.23
PTPDC1-202ENST00000375360 LMOD3Q0VAK6 560 aa22.76■■□□□ 1.23
PTPDC1-202ENST00000375360 SLC26A8Q96RN1 970 aa22.76■■□□□ 1.23
PTPDC1-202ENST00000375360 COG6Q9Y2V7 657 aa22.76■■□□□ 1.23
PTPDC1-202ENST00000375360 RIPK4P57078 832 aa22.75■■□□□ 1.23
PTPDC1-202ENST00000375360 E9PSI1 815 aa22.75■■□□□ 1.23
PTPDC1-202ENST00000375360 WDR97A6NE52 1622 aa22.74■■□□□ 1.23
PTPDC1-202ENST00000375360 TSHZ2Q9NRE2 1034 aa22.74■■□□□ 1.23
PTPDC1-202ENST00000375360 RRP1P56182 461 aaKnown RBP22.72■■□□□ 1.23
PTPDC1-202ENST00000375360 CRBNQ96SW2 442 aa22.72■■□□□ 1.23
PTPDC1-202ENST00000375360 SLC52A1Q9NWF4 448 aa22.72■■□□□ 1.23
PTPDC1-202ENST00000375360 ROCK1Q13464 1354 aa22.72■■□□□ 1.23
PTPDC1-202ENST00000375360 HSP90AB1P08238 724 aaKnown RBP22.72■■□□□ 1.23
PTPDC1-202ENST00000375360 CDCA7LQ96GN5 454 aa22.72■■□□□ 1.23
PTPDC1-202ENST00000375360 CAMSAP2Q08AD1 1489 aa22.71■■□□□ 1.23
PTPDC1-202ENST00000375360 PMFBP1Q8TBY8 1022 aa22.71■■□□□ 1.23
PTPDC1-202ENST00000375360 CD109Q6YHK3 1445 aa22.71■■□□□ 1.23
PTPDC1-202ENST00000375360 C11orf95C9JLR9 678 aaPredicted RBP22.71■■□□□ 1.23
PTPDC1-202ENST00000375360 GOLGA6L22H0YM25 854 aa22.7■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms