RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 POLR1AO95602 1720 aaPredicted RBP25.5■■□□□ 1.67
HLA-DQB1-201ENST00000374943 UHRF1BP1Q6BDS2 1440 aa25.5■■□□□ 1.67
HLA-DQB1-201ENST00000374943 MAP3K4Q9Y6R4 1608 aa25.5■■□□□ 1.67
HLA-DQB1-201ENST00000374943 NBPF8Q3BBV2 869 aa25.49■■□□□ 1.67
HLA-DQB1-201ENST00000374943 GLI2P10070 1586 aa25.48■■□□□ 1.67
HLA-DQB1-201ENST00000374943 VWDEQ8N2E2 1590 aa25.48■■□□□ 1.67
HLA-DQB1-201ENST00000374943 NEO1Q92859 1461 aa25.48■■□□□ 1.67
HLA-DQB1-201ENST00000374943 TET3O43151 1660 aa25.47■■□□□ 1.67
HLA-DQB1-201ENST00000374943 PLA2R1Q13018 1463 aa25.47■■□□□ 1.67
HLA-DQB1-201ENST00000374943 E9PCH4 1651 aa25.47■■□□□ 1.67
HLA-DQB1-201ENST00000374943 POGZQ7Z3K3 1410 aa25.47■■□□□ 1.67
HLA-DQB1-201ENST00000374943 PRDM15P57071 1507 aaPredicted RBP25.45■■□□□ 1.66
HLA-DQB1-201ENST00000374943 EIF4G2P78344 907 aaKnown RBP eCLIP25.45■■□□□ 1.66
HLA-DQB1-201ENST00000374943 HIRIP3Q9BW71 556 aaPredicted RBP25.45■■□□□ 1.66
HLA-DQB1-201ENST00000374943 CCDC144AA2RUR9 1427 aa25.44■■□□□ 1.66
HLA-DQB1-201ENST00000374943 HECW2Q9P2P5 1572 aa25.44■■□□□ 1.66
HLA-DQB1-201ENST00000374943 HSPA5P11021 654 aaKnown RBP25.43■■□□□ 1.66
HLA-DQB1-201ENST00000374943 MROH1Q8NDA8 1641 aa25.43■■□□□ 1.66
HLA-DQB1-201ENST00000374943 DHX29Q7Z478 1369 aaKnown RBP25.42■■□□□ 1.66
HLA-DQB1-201ENST00000374943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.42■■□□□ 1.66
HLA-DQB1-201ENST00000374943 RALGAPBQ86X10 1494 aa25.42■■□□□ 1.66
HLA-DQB1-201ENST00000374943 MLH3Q9UHC1 1453 aa25.42■■□□□ 1.66
HLA-DQB1-201ENST00000374943 SPHKAPQ2M3C7 1700 aa25.41■■□□□ 1.66
HLA-DQB1-201ENST00000374943 BCORL1Q5H9F3 1711 aa25.41■■□□□ 1.66
HLA-DQB1-201ENST00000374943 SPATA31E1Q6ZUB1 1445 aa25.41■■□□□ 1.66
HLA-DQB1-201ENST00000374943 DDX10Q13206 875 aaKnown RBP25.41■■□□□ 1.66
HLA-DQB1-201ENST00000374943 RNF17Q9BXT8 1623 aaKnown RBP25.4■■□□□ 1.66
HLA-DQB1-201ENST00000374943 CENPBP07199 599 aaPredicted RBP25.39■■□□□ 1.65
HLA-DQB1-201ENST00000374943 TRPM2O94759 1503 aa25.37■■□□□ 1.65
HLA-DQB1-201ENST00000374943 CEP152O94986 1710 aa25.36■■□□□ 1.65
HLA-DQB1-201ENST00000374943 RICTORQ6R327 1708 aa25.36■■□□□ 1.65
HLA-DQB1-201ENST00000374943 KANK1Q14678 1352 aa25.34■■□□□ 1.65
HLA-DQB1-201ENST00000374943 A2MP01023 1474 aa25.34■■□□□ 1.65
HLA-DQB1-201ENST00000374943 DIP2BQ9P265 1576 aa25.34■■□□□ 1.65
HLA-DQB1-201ENST00000374943 ABCA6Q8N139 1617 aa25.34■■□□□ 1.65
HLA-DQB1-201ENST00000374943 FRMPD1Q5SYB0 1578 aa25.33■■□□□ 1.64
HLA-DQB1-201ENST00000374943 TRPM1Q7Z4N2 1603 aa25.32■■□□□ 1.64
HLA-DQB1-201ENST00000374943 PTPRTO14522 1441 aa25.32■■□□□ 1.64
HLA-DQB1-201ENST00000374943 LMTK2Q8IWU2 1503 aa25.3■■□□□ 1.64
HLA-DQB1-201ENST00000374943 WASHC2AQ641Q2 1341 aa25.29■■□□□ 1.64
HLA-DQB1-201ENST00000374943 EFCAB6Q5THR3 1501 aa25.28■■□□□ 1.64
HLA-DQB1-201ENST00000374943 LAMC1P11047 1609 aa25.28■■□□□ 1.64
HLA-DQB1-201ENST00000374943 MYT1LQ9UL68 1186 aa25.27■■□□□ 1.64
HLA-DQB1-201ENST00000374943 NEURL4Q96JN8 1562 aa25.27■■□□□ 1.64
HLA-DQB1-201ENST00000374943 PRAG1Q86YV5 1406 aa25.27■■□□□ 1.64
HLA-DQB1-201ENST00000374943 CLTCL1P53675 1640 aa25.26■■□□□ 1.63
HLA-DQB1-201ENST00000374943 KIF3BO15066 747 aa25.26■■□□□ 1.63
HLA-DQB1-201ENST00000374943 USP47Q96K76 1375 aa25.25■■□□□ 1.63
HLA-DQB1-201ENST00000374943 PPRC1Q5VV67 1664 aaKnown RBP25.25■■□□□ 1.63
HLA-DQB1-201ENST00000374943 FAM69CQ0P6D2 419 aa25.25■■□□□ 1.63
HLA-DQB1-201ENST00000374943 CCDC7Q96M83 1385 aa25.25■■□□□ 1.63
HLA-DQB1-201ENST00000374943 DIP2CQ9Y2E4 1556 aa25.25■■□□□ 1.63
HLA-DQB1-201ENST00000374943 DCAF11Q8TEB1 546 aa25.24■■□□□ 1.63
HLA-DQB1-201ENST00000374943 ZNF326Q5BKZ1 582 aaKnown RBP25.22■■□□□ 1.63
HLA-DQB1-201ENST00000374943 YTHDC1Q96MU7 727 aaKnown RBP25.22■■□□□ 1.63
HLA-DQB1-201ENST00000374943 CNTLNQ9NXG0 1405 aa25.21■■□□□ 1.63
HLA-DQB1-201ENST00000374943 ZMYM4Q5VZL5 1548 aa25.2■■□□□ 1.62
HLA-DQB1-201ENST00000374943 KIF1BO60333 1816 aa25.18■■□□□ 1.62
HLA-DQB1-201ENST00000374943 ANP32CO43423 234 aa25.18■■□□□ 1.62
HLA-DQB1-201ENST00000374943 GPRASP1Q5JY77 1395 aa25.17■■□□□ 1.62
HLA-DQB1-201ENST00000374943 C11orf95C9JLR9 678 aaPredicted RBP25.17■■□□□ 1.62
HLA-DQB1-201ENST00000374943 CCER2I3L3R5 266 aa25.17■■□□□ 1.62
HLA-DQB1-201ENST00000374943 KDM2AQ9Y2K7 1162 aa25.17■■□□□ 1.62
HLA-DQB1-201ENST00000374943 TSPOAP1O95153 1857 aa25.16■■□□□ 1.62
HLA-DQB1-201ENST00000374943 MADDQ8WXG6 1647 aa25.16■■□□□ 1.62
HLA-DQB1-201ENST00000374943 ARID4BQ4LE39 1312 aaPredicted RBP25.14■■□□□ 1.61
HLA-DQB1-201ENST00000374943 ZC3H13Q5T200 1668 aaKnown RBP25.14■■□□□ 1.61
HLA-DQB1-201ENST00000374943 CARD11Q9BXL7 1154 aa25.13■■□□□ 1.61
HLA-DQB1-201ENST00000374943 KIF7Q2M1P5 1343 aa25.13■■□□□ 1.61
HLA-DQB1-201ENST00000374943 ROCK2O75116 1388 aaKnown RBP25.13■■□□□ 1.61
HLA-DQB1-201ENST00000374943 RGL3Q3MIN7 710 aa25.12■■□□□ 1.61
HLA-DQB1-201ENST00000374943 CAMSAP1Q5T5Y3 1602 aa25.11■■□□□ 1.61
HLA-DQB1-201ENST00000374943 ABCC3O15438 1527 aa25.11■■□□□ 1.61
HLA-DQB1-201ENST00000374943 RAPGEF3O95398 923 aa25.11■■□□□ 1.61
HLA-DQB1-201ENST00000374943 IFT172Q9UG01 1749 aa25.11■■□□□ 1.61
HLA-DQB1-201ENST00000374943 STAC3Q96MF2 364 aa25.1■■□□□ 1.61
HLA-DQB1-201ENST00000374943 KIAA1210Q9ULL0 1709 aa25.09■■□□□ 1.61
HLA-DQB1-201ENST00000374943 REREQ9P2R6 1566 aa25.05■■□□□ 1.6
HLA-DQB1-201ENST00000374943 MROH2AA6NES4 1674 aa25.05■■□□□ 1.6
HLA-DQB1-201ENST00000374943 YEATS2Q9ULM3 1422 aa25.04■■□□□ 1.6
HLA-DQB1-201ENST00000374943 IQGAP1P46940 1657 aa25.04■■□□□ 1.6
HLA-DQB1-201ENST00000374943 UGGT1Q9NYU2 1555 aa25.04■■□□□ 1.6
HLA-DQB1-201ENST00000374943 NPATQ14207 1427 aa25.04■■□□□ 1.6
HLA-DQB1-201ENST00000374943 SCAF1Q9H7N4 1312 aaKnown RBP25.03■■□□□ 1.6
HLA-DQB1-201ENST00000374943 ADGRB3O60242 1522 aa25.02■■□□□ 1.6
HLA-DQB1-201ENST00000374943 MYOM2P54296 1465 aa25.02■■□□□ 1.6
HLA-DQB1-201ENST00000374943 CFAP65Q6ZU64 1925 aaKnown RBP25.02■■□□□ 1.6
HLA-DQB1-201ENST00000374943 SIGLEC1Q9BZZ2 1709 aa25.01■■□□□ 1.59
HLA-DQB1-201ENST00000374943 PIK3C2BO00750 1634 aa24.98■■□□□ 1.59
HLA-DQB1-201ENST00000374943 ST20-MTHFSA0A0A6YYL1 179 aa24.98■■□□□ 1.59
HLA-DQB1-201ENST00000374943 ARHGAP31Q2M1Z3 1444 aa24.98■■□□□ 1.59
HLA-DQB1-201ENST00000374943 NBPF1Q3BBV0 1214 aa24.97■■□□□ 1.59
HLA-DQB1-201ENST00000374943 GGT6Q6P531 493 aa24.97■■□□□ 1.59
HLA-DQB1-201ENST00000374943 PPLO60437 1756 aa24.96■■□□□ 1.59
HLA-DQB1-201ENST00000374943 KDM4FA0A1W2PPD8 638 aa24.96■■□□□ 1.59
HLA-DQB1-201ENST00000374943 NOS1P29475 1434 aa24.95■■□□□ 1.58
HLA-DQB1-201ENST00000374943 AGLP35573 1532 aa24.95■■□□□ 1.58
HLA-DQB1-201ENST00000374943 WASHC2CQ9Y4E1 1318 aa24.94■■□□□ 1.58
HLA-DQB1-201ENST00000374943 NRXN1Q9ULB1 1477 aa24.93■■□□□ 1.58
HLA-DQB1-201ENST00000374943 COL17A1Q9UMD9 1497 aaPredicted RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms