RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 PRDM15P57071 1507 aaPredicted RBP25.49■■□□□ 1.67
HLA-DMA-201ENST00000374843 IQGAP3Q86VI3 1631 aa25.48■■□□□ 1.67
HLA-DMA-201ENST00000374843 MROH1Q8NDA8 1641 aa25.48■■□□□ 1.67
HLA-DMA-201ENST00000374843 ATP10AO60312 1499 aa25.48■■□□□ 1.67
HLA-DMA-201ENST00000374843 MYT1LQ9UL68 1186 aa25.48■■□□□ 1.67
HLA-DMA-201ENST00000374843 CLSPNQ9HAW4 1339 aa25.47■■□□□ 1.67
HLA-DMA-201ENST00000374843 CCER1Q8TC90 406 aaPredicted RBP25.46■■□□□ 1.67
HLA-DMA-201ENST00000374843 VWDEQ8N2E2 1590 aa25.46■■□□□ 1.67
HLA-DMA-201ENST00000374843 AGLP35573 1532 aa25.46■■□□□ 1.67
HLA-DMA-201ENST00000374843 FAM135AQ9P2D6 1515 aa25.43■■□□□ 1.66
HLA-DMA-201ENST00000374843 TRIM52Q96A61 297 aa25.41■■□□□ 1.66
HLA-DMA-201ENST00000374843 NUP155O75694 1391 aa25.41■■□□□ 1.66
HLA-DMA-201ENST00000374843 MPHOSPH9Q99550 1183 aa25.37■■□□□ 1.65
HLA-DMA-201ENST00000374843 SIGLEC1Q9BZZ2 1709 aa25.37■■□□□ 1.65
HLA-DMA-201ENST00000374843 LMTK2Q8IWU2 1503 aa25.37■■□□□ 1.65
HLA-DMA-201ENST00000374843 KIF3BO15066 747 aa25.35■■□□□ 1.65
HLA-DMA-201ENST00000374843 TET3O43151 1660 aa25.33■■□□□ 1.65
HLA-DMA-201ENST00000374843 SLC4A1APQ9BWU0 796 aaKnown RBP25.32■■□□□ 1.64
HLA-DMA-201ENST00000374843 ZC3H13Q5T200 1668 aaKnown RBP25.32■■□□□ 1.64
HLA-DMA-201ENST00000374843 KANK1Q14678 1352 aa25.31■■□□□ 1.64
HLA-DMA-201ENST00000374843 ABCC3O15438 1527 aa25.29■■□□□ 1.64
HLA-DMA-201ENST00000374843 EFCAB6Q5THR3 1501 aa25.28■■□□□ 1.64
HLA-DMA-201ENST00000374843 CEP152O94986 1710 aa25.26■■□□□ 1.63
HLA-DMA-201ENST00000374843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.25■■□□□ 1.63
HLA-DMA-201ENST00000374843 ANKRD30BQ9BXX2 1392 aa25.25■■□□□ 1.63
HLA-DMA-201ENST00000374843 E9PCH4 1651 aa25.24■■□□□ 1.63
HLA-DMA-201ENST00000374843 ZEB1P37275 1124 aaPredicted RBP25.23■■□□□ 1.63
HLA-DMA-201ENST00000374843 PKD2Q13563 968 aa25.23■■□□□ 1.63
HLA-DMA-201ENST00000374843 CAMSAP1Q5T5Y3 1602 aa25.21■■□□□ 1.63
HLA-DMA-201ENST00000374843 RPRD2Q5VT52 1461 aaKnown RBP25.21■■□□□ 1.63
HLA-DMA-201ENST00000374843 PPP6R1Q9UPN7 881 aa25.2■■□□□ 1.62
HLA-DMA-201ENST00000374843 GGT6Q6P531 493 aa25.17■■□□□ 1.62
HLA-DMA-201ENST00000374843 ARHGAP31Q2M1Z3 1444 aa25.17■■□□□ 1.62
HLA-DMA-201ENST00000374843 FOXD1Q16676 465 aa25.16■■□□□ 1.62
HLA-DMA-201ENST00000374843 PLA2R1Q13018 1463 aa25.15■■□□□ 1.62
HLA-DMA-201ENST00000374843 PTPRTO14522 1441 aa25.15■■□□□ 1.62
HLA-DMA-201ENST00000374843 TRPM2O94759 1503 aa25.15■■□□□ 1.62
HLA-DMA-201ENST00000374843 SPHKAPQ2M3C7 1700 aa25.14■■□□□ 1.61
HLA-DMA-201ENST00000374843 NPATQ14207 1427 aa25.13■■□□□ 1.61
HLA-DMA-201ENST00000374843 WASHC2CQ9Y4E1 1318 aa25.12■■□□□ 1.61
HLA-DMA-201ENST00000374843 CLTCQ00610 1675 aaKnown RBP25.1■■□□□ 1.61
HLA-DMA-201ENST00000374843 SIN3AQ96ST3 1273 aa25.08■■□□□ 1.61
HLA-DMA-201ENST00000374843 MROH2AA6NES4 1674 aa25.07■■□□□ 1.6
HLA-DMA-201ENST00000374843 CNTLNQ9NXG0 1405 aa25.07■■□□□ 1.6
HLA-DMA-201ENST00000374843 TIMELESSQ9UNS1 1208 aa25.06■■□□□ 1.6
HLA-DMA-201ENST00000374843 NOS1P29475 1434 aa25.05■■□□□ 1.6
HLA-DMA-201ENST00000374843 CCDC144AA2RUR9 1427 aa25.04■■□□□ 1.6
HLA-DMA-201ENST00000374843 ARID4BQ4LE39 1312 aaPredicted RBP25.03■■□□□ 1.6
HLA-DMA-201ENST00000374843 CLTCL1P53675 1640 aa25.02■■□□□ 1.6
HLA-DMA-201ENST00000374843 NEURL4Q96JN8 1562 aa25.01■■□□□ 1.59
HLA-DMA-201ENST00000374843 PREX1Q8TCU6 1659 aa25.01■■□□□ 1.59
HLA-DMA-201ENST00000374843 SYNMO15061 1565 aa25■■□□□ 1.59
HLA-DMA-201ENST00000374843 FER1L4A9Z1Z3 1794 aa25■■□□□ 1.59
HLA-DMA-201ENST00000374843 PIK3C2BO00750 1634 aa24.99■■□□□ 1.59
HLA-DMA-201ENST00000374843 ERVK-7P63135 1459 aa24.99■■□□□ 1.59
HLA-DMA-201ENST00000374843 MLECQ14165 292 aa24.99■■□□□ 1.59
HLA-DMA-201ENST00000374843 SPATA31D1Q6ZQQ2 1576 aa24.99■■□□□ 1.59
HLA-DMA-201ENST00000374843 TONSLQ96HA7 1378 aa24.98■■□□□ 1.59
HLA-DMA-201ENST00000374843 NEUROD1Q13562 356 aa24.98■■□□□ 1.59
HLA-DMA-201ENST00000374843 ADAMTSL3P82987 1691 aa24.97■■□□□ 1.59
HLA-DMA-201ENST00000374843 SPATA31E1Q6ZUB1 1445 aa24.95■■□□□ 1.58
HLA-DMA-201ENST00000374843 UGGT1Q9NYU2 1555 aa24.93■■□□□ 1.58
HLA-DMA-201ENST00000374843 MADDQ8WXG6 1647 aa24.93■■□□□ 1.58
HLA-DMA-201ENST00000374843 ZMYM3Q14202 1370 aa24.93■■□□□ 1.58
HLA-DMA-201ENST00000374843 ADGRB3O60242 1522 aa24.91■■□□□ 1.58
HLA-DMA-201ENST00000374843 ESF1Q9H501 851 aaKnown RBP24.91■■□□□ 1.58
HLA-DMA-201ENST00000374843 C3P01024 1663 aa24.89■■□□□ 1.58
HLA-DMA-201ENST00000374843 KIF1BO60333 1816 aa24.86■■□□□ 1.57
HLA-DMA-201ENST00000374843 RIMS1Q86UR5 1692 aaKnown RBP24.85■■□□□ 1.57
HLA-DMA-201ENST00000374843 L3MBTL2Q969R5 705 aa24.84■■□□□ 1.57
HLA-DMA-201ENST00000374843 SLC52A1Q9NWF4 448 aa24.83■■□□□ 1.57
HLA-DMA-201ENST00000374843 CFAP65Q6ZU64 1925 aaKnown RBP24.82■■□□□ 1.56
HLA-DMA-201ENST00000374843 PPP1R15AO75807 674 aaPredicted RBP24.81■■□□□ 1.56
HLA-DMA-201ENST00000374843 FBXO31Q5XUX0 539 aaPredicted RBP24.81■■□□□ 1.56
HLA-DMA-201ENST00000374843 UHRF1BP1Q6BDS2 1440 aa24.8■■□□□ 1.56
HLA-DMA-201ENST00000374843 TMEM131LA2VDJ0 1609 aa24.79■■□□□ 1.56
HLA-DMA-201ENST00000374843 IFT172Q9UG01 1749 aa24.79■■□□□ 1.56
HLA-DMA-201ENST00000374843 TNRQ92752 1358 aa24.79■■□□□ 1.56
HLA-DMA-201ENST00000374843 KDM5AP29375 1690 aaKnown RBP24.78■■□□□ 1.56
HLA-DMA-201ENST00000374843 MYOM2P54296 1465 aa24.76■■□□□ 1.55
HLA-DMA-201ENST00000374843 NLRP1Q9C000 1473 aa24.76■■□□□ 1.55
HLA-DMA-201ENST00000374843 IDI1Q13907 227 aa24.74■■□□□ 1.55
HLA-DMA-201ENST00000374843 STAC3Q96MF2 364 aa24.72■■□□□ 1.55
HLA-DMA-201ENST00000374843 PRAG1Q86YV5 1406 aa24.71■■□□□ 1.55
HLA-DMA-201ENST00000374843 PPLO60437 1756 aa24.71■■□□□ 1.55
HLA-DMA-201ENST00000374843 MYO3AQ8NEV4 1616 aa24.71■■□□□ 1.55
HLA-DMA-201ENST00000374843 NEXMIFQ5QGS0 1516 aa24.71■■□□□ 1.55
HLA-DMA-201ENST00000374843 A2ML1A8K2U0 1454 aa24.69■■□□□ 1.54
HLA-DMA-201ENST00000374843 PTPRMP28827 1452 aa24.69■■□□□ 1.54
HLA-DMA-201ENST00000374843 NRXN1Q9ULB1 1477 aa24.69■■□□□ 1.54
HLA-DMA-201ENST00000374843 RPGRIP1LQ68CZ1 1315 aa24.68■■□□□ 1.54
HLA-DMA-201ENST00000374843 RGL3Q3MIN7 710 aa24.68■■□□□ 1.54
HLA-DMA-201ENST00000374843 RALGAPBQ86X10 1494 aa24.68■■□□□ 1.54
HLA-DMA-201ENST00000374843 MYO5BQ9ULV0 1848 aa24.68■■□□□ 1.54
HLA-DMA-201ENST00000374843 CEBPAP49715 358 aaPredicted RBP24.67■■□□□ 1.54
HLA-DMA-201ENST00000374843 UBR1Q8IWV7 1749 aa24.66■■□□□ 1.54
HLA-DMA-201ENST00000374843 DCAF11Q8TEB1 546 aa24.66■■□□□ 1.54
HLA-DMA-201ENST00000374843 NBPF8Q3BBV2 869 aa24.65■■□□□ 1.54
HLA-DMA-201ENST00000374843 ZFYVE9O95405 1425 aa24.64■■□□□ 1.54
HLA-DMA-201ENST00000374843 ZNF142P52746 1687 aaPredicted RBP24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms