RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 NEO1Q92859 1461 aa18.85■□□□□ 0.61
A1CF-204ENST00000373997 KDM5CP41229 1560 aa18.85■□□□□ 0.61
A1CF-204ENST00000373997 KIF13AQ9H1H9 1805 aa18.84■□□□□ 0.61
A1CF-204ENST00000373997 HECW2Q9P2P5 1572 aa18.84■□□□□ 0.61
A1CF-204ENST00000373997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.612e-6■■□□□ 12.7
A1CF-204ENST00000373997 RPRD2Q5VT52 1461 aaKnown RBP18.83■□□□□ 0.61
A1CF-204ENST00000373997 MAGI2Q86UL8 1455 aa18.83■□□□□ 0.6
A1CF-204ENST00000373997 PPP1R15AO75807 674 aaPredicted RBP18.82■□□□□ 0.6
A1CF-204ENST00000373997 PPRC1Q5VV67 1664 aaKnown RBP18.82■□□□□ 0.6
A1CF-204ENST00000373997 RICTORQ6R327 1708 aa18.82■□□□□ 0.6
A1CF-204ENST00000373997 DEPDC5O75140 1603 aa18.81■□□□□ 0.6
A1CF-204ENST00000373997 FAM69CQ0P6D2 419 aa18.81■□□□□ 0.6
A1CF-204ENST00000373997 EIF2AK4Q9P2K8 1649 aaKnown RBP18.8■□□□□ 0.6
A1CF-204ENST00000373997 ABCA6Q8N139 1617 aa18.78■□□□□ 0.6
A1CF-204ENST00000373997 TEX14Q8IWB6 1497 aa18.77■□□□□ 0.6
A1CF-204ENST00000373997 MLH3Q9UHC1 1453 aa18.74■□□□□ 0.59
A1CF-204ENST00000373997 E9PCH4 1651 aa18.74■□□□□ 0.59
A1CF-204ENST00000373997 FRMPD1Q5SYB0 1578 aa18.74■□□□□ 0.59
A1CF-204ENST00000373997 RAPGEF3O95398 923 aa18.74■□□□□ 0.59
A1CF-204ENST00000373997 L3MBTL2Q969R5 705 aa18.74■□□□□ 0.59
A1CF-204ENST00000373997 DHX29Q7Z478 1369 aaKnown RBP18.73■□□□□ 0.59
A1CF-204ENST00000373997 MROH1Q8NDA8 1641 aa18.73■□□□□ 0.59
A1CF-204ENST00000373997 A2MP01023 1474 aa18.72■□□□□ 0.59
A1CF-204ENST00000373997 TET3O43151 1660 aa18.72■□□□□ 0.59
A1CF-204ENST00000373997 CEP152O94986 1710 aa18.71■□□□□ 0.59
A1CF-204ENST00000373997 PRDM15P57071 1507 aaPredicted RBP18.71■□□□□ 0.59
A1CF-204ENST00000373997 KIF3BO15066 747 aa18.71■□□□□ 0.59
A1CF-204ENST00000373997 DIP2CQ9Y2E4 1556 aa18.7■□□□□ 0.58
A1CF-204ENST00000373997 RNF17Q9BXT8 1623 aaKnown RBP18.7■□□□□ 0.58
A1CF-204ENST00000373997 SPHKAPQ2M3C7 1700 aa18.69■□□□□ 0.58
A1CF-204ENST00000373997 VWDEQ8N2E2 1590 aa18.69■□□□□ 0.58
A1CF-204ENST00000373997 SUPT16HQ9Y5B9 1047 aaKnown RBP18.67■□□□□ 0.58
A1CF-204ENST00000373997 KANK1Q14678 1352 aa18.67■□□□□ 0.58
A1CF-204ENST00000373997 BCORL1Q5H9F3 1711 aa18.67■□□□□ 0.58
A1CF-204ENST00000373997 PLA2R1Q13018 1463 aa18.66■□□□□ 0.58
A1CF-204ENST00000373997 CCDC144AA2RUR9 1427 aa18.66■□□□□ 0.58
A1CF-204ENST00000373997 ZMYM4Q5VZL5 1548 aa18.64■□□□□ 0.57
A1CF-204ENST00000373997 CFAP65Q6ZU64 1925 aaKnown RBP18.63■□□□□ 0.57
A1CF-204ENST00000373997 YEATS2Q9ULM3 1422 aa18.63■□□□□ 0.57
A1CF-204ENST00000373997 HIRIP3Q9BW71 556 aaPredicted RBP18.62■□□□□ 0.57
A1CF-204ENST00000373997 NBPF8Q3BBV2 869 aa18.61■□□□□ 0.57
A1CF-204ENST00000373997 ATP10AO60312 1499 aa18.6■□□□□ 0.57
A1CF-204ENST00000373997 EFCAB6Q5THR3 1501 aa18.6■□□□□ 0.57
A1CF-204ENST00000373997 TRPM2O94759 1503 aa18.6■□□□□ 0.57
A1CF-204ENST00000373997 ZNF326Q5BKZ1 582 aaKnown RBP18.58■□□□□ 0.57
A1CF-204ENST00000373997 CLTCL1P53675 1640 aa18.58■□□□□ 0.57
A1CF-204ENST00000373997 GGT6Q6P531 493 aa18.56■□□□□ 0.56
A1CF-204ENST00000373997 LMTK2Q8IWU2 1503 aa18.56■□□□□ 0.56
A1CF-204ENST00000373997 CAMSAP1Q5T5Y3 1602 aa18.56■□□□□ 0.56
A1CF-204ENST00000373997 KIF1BO60333 1816 aa18.54■□□□□ 0.56
A1CF-204ENST00000373997 ABCC3O15438 1527 aa18.54■□□□□ 0.56
A1CF-204ENST00000373997 KDM2AQ9Y2K7 1162 aa18.53■□□□□ 0.56
A1CF-204ENST00000373997 RGL3Q3MIN7 710 aa18.53■□□□□ 0.56
A1CF-204ENST00000373997 DCAF11Q8TEB1 546 aa18.53■□□□□ 0.56
A1CF-204ENST00000373997 PTPRTO14522 1441 aa18.53■□□□□ 0.56
A1CF-204ENST00000373997 ZC3H13Q5T200 1668 aaKnown RBP18.52■□□□□ 0.56
A1CF-204ENST00000373997 DDX10Q13206 875 aaKnown RBP18.52■□□□□ 0.56
A1CF-204ENST00000373997 UHRF1BP1Q6BDS2 1440 aa18.52■□□□□ 0.55
A1CF-204ENST00000373997 COL17A1Q9UMD9 1497 aaPredicted RBP18.52■□□□□ 0.55
A1CF-204ENST00000373997 SIGLEC1Q9BZZ2 1709 aa18.51■□□□□ 0.55
A1CF-204ENST00000373997 UGGT1Q9NYU2 1555 aa18.51■□□□□ 0.55
A1CF-204ENST00000373997 HSPA5P11021 654 aaKnown RBP18.51■□□□□ 0.55
A1CF-204ENST00000373997 CCER2I3L3R5 266 aa18.5■□□□□ 0.55
A1CF-204ENST00000373997 ARHGEF40Q8TER5 1519 aa18.5■□□□□ 0.55
A1CF-204ENST00000373997 TRPM1Q7Z4N2 1603 aa18.5■□□□□ 0.55
A1CF-204ENST00000373997 RALGAPBQ86X10 1494 aa18.49■□□□□ 0.55
A1CF-204ENST00000373997 EIF4G2P78344 907 aaKnown RBP eCLIP18.49■□□□□ 0.55
A1CF-204ENST00000373997 MROH2AA6NES4 1674 aa18.48■□□□□ 0.55
A1CF-204ENST00000373997 REREQ9P2R6 1566 aa18.48■□□□□ 0.55
A1CF-204ENST00000373997 WASHC2CQ9Y4E1 1318 aa18.48■□□□□ 0.55
A1CF-204ENST00000373997 POLR1AO95602 1720 aaPredicted RBP18.48■□□□□ 0.55
A1CF-204ENST00000373997 NPATQ14207 1427 aa18.47■□□□□ 0.55
A1CF-204ENST00000373997 SPATA31E1Q6ZUB1 1445 aa18.47■□□□□ 0.55
A1CF-204ENST00000373997 PRAG1Q86YV5 1406 aa18.45■□□□□ 0.54
A1CF-204ENST00000373997 ANP32CO43423 234 aa18.43■□□□□ 0.54
A1CF-204ENST00000373997 IFT172Q9UG01 1749 aa18.42■□□□□ 0.54
A1CF-204ENST00000373997 MADDQ8WXG6 1647 aa18.42■□□□□ 0.54
A1CF-204ENST00000373997 AGLP35573 1532 aa18.42■□□□□ 0.54
A1CF-204ENST00000373997 CLTCQ00610 1675 aaKnown RBP18.41■□□□□ 0.54
A1CF-204ENST00000373997 USP47Q96K76 1375 aa18.41■□□□□ 0.54
A1CF-204ENST00000373997 PREX1Q8TCU6 1659 aa18.41■□□□□ 0.54
A1CF-204ENST00000373997 TRHP20396 242 aaPredicted RBP18.4■□□□□ 0.54
A1CF-204ENST00000373997 SYNMO15061 1565 aa18.39■□□□□ 0.54
A1CF-204ENST00000373997 NEURL4Q96JN8 1562 aa18.39■□□□□ 0.54
A1CF-204ENST00000373997 ROCK2O75116 1388 aaKnown RBP18.39■□□□□ 0.53
A1CF-204ENST00000373997 CARD11Q9BXL7 1154 aa18.38■□□□□ 0.53
A1CF-204ENST00000373997 TSHZ2Q9NRE2 1034 aa18.38■□□□□ 0.53
A1CF-204ENST00000373997 CNTLNQ9NXG0 1405 aa18.38■□□□□ 0.53
A1CF-204ENST00000373997 ADGRB3O60242 1522 aa18.38■□□□□ 0.53
A1CF-204ENST00000373997 PIK3C2BO00750 1634 aa18.37■□□□□ 0.53
A1CF-204ENST00000373997 LAMC1P11047 1609 aa18.36■□□□□ 0.53
A1CF-204ENST00000373997 MYO5BQ9ULV0 1848 aa18.36■□□□□ 0.53
A1CF-204ENST00000373997 WASHC2AQ641Q2 1341 aa18.35■□□□□ 0.53
A1CF-204ENST00000373997 PPLO60437 1756 aa18.35■□□□□ 0.53
A1CF-204ENST00000373997 NOS1P29475 1434 aa18.35■□□□□ 0.53
A1CF-204ENST00000373997 ARHGAP31Q2M1Z3 1444 aa18.35■□□□□ 0.53
A1CF-204ENST00000373997 MLECQ14165 292 aa18.34■□□□□ 0.53
A1CF-204ENST00000373997 CHGAP10645 457 aaKnown RBP18.34■□□□□ 0.53
A1CF-204ENST00000373997 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
A1CF-204ENST00000373997 C11orf95C9JLR9 678 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms