RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
A1CF-204ENST00000373997 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
A1CF-204ENST00000373997 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
A1CF-204ENST00000373997 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
A1CF-204ENST00000373997 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
A1CF-204ENST00000373997 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
A1CF-204ENST00000373997 MT1EP04732 61 aa4.73□□□□□ -1.65
A1CF-204ENST00000373997 KRTAP4-2Q9BYR5 136 aa4.71□□□□□ -1.66
A1CF-204ENST00000373997 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
A1CF-204ENST00000373997 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
A1CF-204ENST00000373997 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
A1CF-204ENST00000373997 MACF1Q9UPN3 7388 aaKnown RBP4.66□□□□□ -1.66
A1CF-204ENST00000373997 MT1LQ93083 61 aa4.65□□□□□ -1.67
A1CF-204ENST00000373997 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
A1CF-204ENST00000373997 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
A1CF-204ENST00000373997 MUC12Q9UKN1 5478 aa4.57□□□□□ -1.68
A1CF-204ENST00000373997 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
A1CF-204ENST00000373997 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
A1CF-204ENST00000373997 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
A1CF-204ENST00000373997 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
A1CF-204ENST00000373997 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.68
A1CF-204ENST00000373997 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
A1CF-204ENST00000373997 KRTAP5-9P26371 169 aa4.49□□□□□ -1.69
A1CF-204ENST00000373997 MT1GP13640 62 aa4.46□□□□□ -1.69
A1CF-204ENST00000373997 MT1MQ8N339 61 aa4.45□□□□□ -1.7
A1CF-204ENST00000373997 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
A1CF-204ENST00000373997 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
A1CF-204ENST00000373997 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
A1CF-204ENST00000373997 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
A1CF-204ENST00000373997 SPRR2EP22531 72 aa4.38□□□□□ -1.71
A1CF-204ENST00000373997 SPRR2BP35325 72 aa4.38□□□□□ -1.71
A1CF-204ENST00000373997 SPRR2AP35326 72 aa4.38□□□□□ -1.71
A1CF-204ENST00000373997 KRTAP6-3Q3LI67 103 aa4.38□□□□□ -1.71
A1CF-204ENST00000373997 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
A1CF-204ENST00000373997 MDN1Q9NU22 5596 aa4.34□□□□□ -1.71
A1CF-204ENST00000373997 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
A1CF-204ENST00000373997 SPRR2DP22532 72 aa4.21□□□□□ -1.74
A1CF-204ENST00000373997 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
A1CF-204ENST00000373997 NEBP20929 6669 aa4.03□□□□□ -1.76
A1CF-204ENST00000373997 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
A1CF-204ENST00000373997 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
A1CF-204ENST00000373997 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
A1CF-204ENST00000373997 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
A1CF-204ENST00000373997 MT1AP04731 61 aa3.93□□□□□ -1.78
A1CF-204ENST00000373997 MT3P25713 68 aa3.87□□□□□ -1.79
A1CF-204ENST00000373997 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
A1CF-204ENST00000373997 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
A1CF-204ENST00000373997 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
A1CF-204ENST00000373997 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
A1CF-204ENST00000373997 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
A1CF-204ENST00000373997 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
A1CF-204ENST00000373997 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
A1CF-204ENST00000373997 MT4P47944 62 aa3.68□□□□□ -1.82
A1CF-204ENST00000373997 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
A1CF-204ENST00000373997 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
A1CF-204ENST00000373997 PRM1P04553 51 aa3.52□□□□□ -1.85
A1CF-204ENST00000373997 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
A1CF-204ENST00000373997 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
A1CF-204ENST00000373997 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
A1CF-204ENST00000373997 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
A1CF-204ENST00000373997 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
A1CF-204ENST00000373997 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
A1CF-204ENST00000373997 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.93
A1CF-204ENST00000373997 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
A1CF-204ENST00000373997 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
A1CF-204ENST00000373997 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.94
A1CF-204ENST00000373997 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
A1CF-204ENST00000373997 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
A1CF-204ENST00000373997 LCE1CQ5T751 118 aa2.84□□□□□ -1.96
A1CF-204ENST00000373997 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
A1CF-204ENST00000373997 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
A1CF-204ENST00000373997 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
A1CF-204ENST00000373997 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
A1CF-204ENST00000373997 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
A1CF-204ENST00000373997 PHGR1C9JFL3 82 aa2.15□□□□□ -2.06
A1CF-204ENST00000373997 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
A1CF-204ENST00000373997 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 92.5 ms