RNA–Protein interactions for RNA: ENST00000373573.7

HDAC8-207, Transcript of histone deacetylase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC8, Length 2,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-207ENST00000373573 RALGAPBQ86X10 1494 aa17.8■□□□□ 0.44
HDAC8-207ENST00000373573 ANKRD30AQ9BXX3 1397 aa17.8■□□□□ 0.44
HDAC8-207ENST00000373573 NPM1P06748 294 aaKnown RBP eCLIP17.79■□□□□ 0.44
HDAC8-207ENST00000373573 MYT1LQ9UL68 1186 aa17.79■□□□□ 0.44
HDAC8-207ENST00000373573 PKD2Q13563 968 aa17.79■□□□□ 0.44
HDAC8-207ENST00000373573 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
HDAC8-207ENST00000373573 ARHGEF12Q9NZN5 1544 aa17.78■□□□□ 0.44
HDAC8-207ENST00000373573 ABCA9Q8IUA7 1624 aa17.77■□□□□ 0.44
HDAC8-207ENST00000373573 ANKRD50Q9ULJ7 1429 aa17.76■□□□□ 0.43
HDAC8-207ENST00000373573 ZNF777Q9ULD5 760 aaPredicted RBP17.76■□□□□ 0.43
HDAC8-207ENST00000373573 ZNF326Q5BKZ1 582 aaKnown RBP17.76■□□□□ 0.43
HDAC8-207ENST00000373573 PNISRQ8TF01 805 aaKnown RBP17.76■□□□□ 0.43
HDAC8-207ENST00000373573 POLR3GLQ9BT43 218 aa17.75■□□□□ 0.43
HDAC8-207ENST00000373573 SHANK2Q9UPX8 1470 aa17.75■□□□□ 0.43
HDAC8-207ENST00000373573 KDM5DQ9BY66 1539 aa17.73■□□□□ 0.43
HDAC8-207ENST00000373573 SAMD9LQ8IVG5 1584 aa17.73■□□□□ 0.43
HDAC8-207ENST00000373573 KIF15Q9NS87 1388 aa17.73■□□□□ 0.43
HDAC8-207ENST00000373573 ARHGAP5Q13017 1502 aa17.72■□□□□ 0.43
HDAC8-207ENST00000373573 CCDC136Q96JN2 1154 aa17.72■□□□□ 0.43
HDAC8-207ENST00000373573 LRPPRCP42704 1394 aaKnown RBP17.71■□□□□ 0.43
HDAC8-207ENST00000373573 KTN1Q86UP2 1357 aaKnown RBP17.71■□□□□ 0.43
HDAC8-207ENST00000373573 ARAP3Q8WWN8 1544 aa17.71■□□□□ 0.43
HDAC8-207ENST00000373573 TMC1Q8TDI8 760 aa17.71■□□□□ 0.42
HDAC8-207ENST00000373573 NOP58Q9Y2X3 529 aaKnown RBP17.71■□□□□ 0.42
HDAC8-207ENST00000373573 PLCH2O75038 1416 aa17.7■□□□□ 0.42
HDAC8-207ENST00000373573 E9PCH4 1651 aa17.7■□□□□ 0.42
HDAC8-207ENST00000373573 CNGB1Q14028 1251 aaPredicted RBP17.7■□□□□ 0.42
HDAC8-207ENST00000373573 BRD4O60885 1362 aaPredicted RBP17.7■□□□□ 0.42
HDAC8-207ENST00000373573 CARD11Q9BXL7 1154 aa17.69■□□□□ 0.42
HDAC8-207ENST00000373573 NUP155O75694 1391 aa17.69■□□□□ 0.42
HDAC8-207ENST00000373573 C9orf84Q5VXU9 1444 aa17.69■□□□□ 0.42
HDAC8-207ENST00000373573 ARHGEF5Q12774 1597 aa17.69■□□□□ 0.42
HDAC8-207ENST00000373573 TSPY4P0CV99 314 aa17.67■□□□□ 0.42
HDAC8-207ENST00000373573 TSPY10P0CW01 314 aa17.67■□□□□ 0.42
HDAC8-207ENST00000373573 RALBP1Q15311 655 aa17.66■□□□□ 0.42
HDAC8-207ENST00000373573 MYBBP1AQ9BQG0 1328 aaKnown RBP17.66■□□□□ 0.42
HDAC8-207ENST00000373573 SYCP2Q9BX26 1530 aa17.64■□□□□ 0.41
HDAC8-207ENST00000373573 ABCC1P33527 1531 aa17.63■□□□□ 0.41
HDAC8-207ENST00000373573 ST20-MTHFSA0A0A6YYL1 179 aa17.63■□□□□ 0.41
HDAC8-207ENST00000373573 RSPH4AQ5TD94 716 aa17.63■□□□□ 0.41
HDAC8-207ENST00000373573 PLEKHH2Q8IVE3 1493 aa17.63■□□□□ 0.41
HDAC8-207ENST00000373573 GLI2P10070 1586 aa17.63■□□□□ 0.41
HDAC8-207ENST00000373573 DIP2BQ9P265 1576 aa17.62■□□□□ 0.41
HDAC8-207ENST00000373573 PAK3O75914 559 aaPredicted RBP17.62■□□□□ 0.41
HDAC8-207ENST00000373573 PRKCSHP14314 528 aaPredicted RBP17.62■□□□□ 0.41
HDAC8-207ENST00000373573 MAP3K4Q9Y6R4 1608 aa17.62■□□□□ 0.41
HDAC8-207ENST00000373573 ANP32AP39687 249 aaKnown RBP17.61■□□□□ 0.41
HDAC8-207ENST00000373573 IPO9Q96P70 1041 aaKnown RBP17.6■□□□□ 0.41
HDAC8-207ENST00000373573 FANCAO15360 1455 aa17.6■□□□□ 0.41
HDAC8-207ENST00000373573 CCDC141Q6ZP82 1450 aa17.6■□□□□ 0.41
HDAC8-207ENST00000373573 DEKP35659 375 aaKnown RBP17.6■□□□□ 0.41
HDAC8-207ENST00000373573 EFCAB2Q5VUJ9 269 aa17.6■□□□□ 0.41
HDAC8-207ENST00000373573 CFAP74Q9C0B2 1584 aa17.59■□□□□ 0.41
HDAC8-207ENST00000373573 CD109Q6YHK3 1445 aa17.59■□□□□ 0.41
HDAC8-207ENST00000373573 RRP1P56182 461 aaKnown RBP17.59■□□□□ 0.41
HDAC8-207ENST00000373573 SENP3-EIF4A1A0A087X0R7 540 aa17.58■□□□□ 0.4
HDAC8-207ENST00000373573 DCAF11Q8TEB1 546 aa17.58■□□□□ 0.4
HDAC8-207ENST00000373573 KDM2AQ9Y2K7 1162 aa17.58■□□□□ 0.4
HDAC8-207ENST00000373573 TRPM1Q7Z4N2 1603 aa17.58■□□□□ 0.4
HDAC8-207ENST00000373573 PARD3Q8TEW0 1356 aa17.57■□□□□ 0.4
HDAC8-207ENST00000373573 MAST1Q9Y2H9 1570 aa17.57■□□□□ 0.4
HDAC8-207ENST00000373573 HNRNPMP52272 730 aaKnown RBP eCLIP17.57■□□□□ 0.4
HDAC8-207ENST00000373573 NLRP13Q86W25 1043 aa17.55■□□□□ 0.4
HDAC8-207ENST00000373573 KIF13AQ9H1H9 1805 aa17.55■□□□□ 0.4
HDAC8-207ENST00000373573 FAM135AQ9P2D6 1515 aa17.55■□□□□ 0.4
HDAC8-207ENST00000373573 PRAG1Q86YV5 1406 aa17.55■□□□□ 0.4
HDAC8-207ENST00000373573 PDE3BQ13370 1112 aa17.55■□□□□ 0.4
HDAC8-207ENST00000373573 RCAN3Q9UKA8 241 aa17.54■□□□□ 0.4
HDAC8-207ENST00000373573 ADGRL1O94910 1474 aa17.53■□□□□ 0.4
HDAC8-207ENST00000373573 LAMC1P11047 1609 aa17.52■□□□□ 0.4
HDAC8-207ENST00000373573 NBR1Q14596 966 aa17.52■□□□□ 0.39
HDAC8-207ENST00000373573 EXOC6Q8TAG9 804 aa17.52■□□□□ 0.39
HDAC8-207ENST00000373573 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.39
HDAC8-207ENST00000373573 GPRASP1Q5JY77 1395 aa17.52■□□□□ 0.39
HDAC8-207ENST00000373573 INSRP06213 1382 aa17.51■□□□□ 0.39
HDAC8-207ENST00000373573 TRAPPC8Q9Y2L5 1435 aa17.51■□□□□ 0.39
HDAC8-207ENST00000373573 TCERG1O14776 1098 aaKnown RBP17.5■□□□□ 0.39
HDAC8-207ENST00000373573 ZMYM4Q5VZL5 1548 aa17.5■□□□□ 0.39
HDAC8-207ENST00000373573 PPRC1Q5VV67 1664 aaKnown RBP17.5■□□□□ 0.39
HDAC8-207ENST00000373573 PLXNC1O60486 1568 aa17.5■□□□□ 0.39
HDAC8-207ENST00000373573 NEO1Q92859 1461 aa17.5■□□□□ 0.39
HDAC8-207ENST00000373573 CCDC144AA2RUR9 1427 aa17.5■□□□□ 0.39
HDAC8-207ENST00000373573 COL17A1Q9UMD9 1497 aaPredicted RBP17.49■□□□□ 0.39
HDAC8-207ENST00000373573 PER1O15534 1290 aaPredicted RBP17.49■□□□□ 0.39
HDAC8-207ENST00000373573 TSPOAP1O95153 1857 aa17.49■□□□□ 0.39
HDAC8-207ENST00000373573 FAM69CQ0P6D2 419 aa17.48■□□□□ 0.39
HDAC8-207ENST00000373573 UNC13BO14795 1591 aa17.48■□□□□ 0.39
HDAC8-207ENST00000373573 WASHC2CQ9Y4E1 1318 aa17.48■□□□□ 0.39
HDAC8-207ENST00000373573 PRDM15P57071 1507 aaPredicted RBP17.48■□□□□ 0.39
HDAC8-207ENST00000373573 SCAPERQ9BY12 1400 aa17.48■□□□□ 0.39
HDAC8-207ENST00000373573 BLMP54132 1417 aaPredicted RBP17.46■□□□□ 0.39
HDAC8-207ENST00000373573 INO80Q9ULG1 1556 aaPredicted RBP17.46■□□□□ 0.39
HDAC8-207ENST00000373573 ZFYVE16Q7Z3T8 1539 aa17.46■□□□□ 0.39
HDAC8-207ENST00000373573 A2MP01023 1474 aa17.45■□□□□ 0.38
HDAC8-207ENST00000373573 PLA2R1Q13018 1463 aa17.45■□□□□ 0.38
HDAC8-207ENST00000373573 MS4A1P11836 297 aa17.45■□□□□ 0.38
HDAC8-207ENST00000373573 EIF2AK4Q9P2K8 1649 aaKnown RBP17.44■□□□□ 0.38
HDAC8-207ENST00000373573 NBPF1Q3BBV0 1214 aa17.43■□□□□ 0.38
HDAC8-207ENST00000373573 SALL2Q9Y467 1007 aaPredicted RBP17.43■□□□□ 0.38
HDAC8-207ENST00000373573 ZNF518AQ6AHZ1 1483 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms