RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 CEP152O94986 1710 aa28.13■■■□□ 2.09
CDX4-201ENST00000373514 KIF3BO15066 747 aa28.11■■■□□ 2.09
CDX4-201ENST00000373514 ANKRD50Q9ULJ7 1429 aa28.09■■■□□ 2.09
CDX4-201ENST00000373514 PRDM15P57071 1507 aaPredicted RBP28.09■■■□□ 2.09
CDX4-201ENST00000373514 GGT6Q6P531 493 aa28.08■■■□□ 2.08
CDX4-201ENST00000373514 MROH2AA6NES4 1674 aa28.07■■■□□ 2.08
CDX4-201ENST00000373514 C3P01024 1663 aa28.07■■■□□ 2.08
CDX4-201ENST00000373514 ZC3H13Q5T200 1668 aaKnown RBP28.06■■■□□ 2.08
CDX4-201ENST00000373514 UNC13BO14795 1591 aa28.05■■■□□ 2.08
CDX4-201ENST00000373514 NAIPQ13075 1403 aa28.04■■■□□ 2.08
CDX4-201ENST00000373514 KDM5DQ9BY66 1539 aa28.04■■■□□ 2.08
CDX4-201ENST00000373514 PTPRMP28827 1452 aa28.04■■■□□ 2.08
CDX4-201ENST00000373514 HFM1A2PYH4 1435 aa28.01■■■□□ 2.08
CDX4-201ENST00000373514 CAMSAP1Q5T5Y3 1602 aa28■■■□□ 2.07
CDX4-201ENST00000373514 ABCC3O15438 1527 aa28■■■□□ 2.07
CDX4-201ENST00000373514 FAM135AQ9P2D6 1515 aa27.99■■■□□ 2.07
CDX4-201ENST00000373514 VWDEQ8N2E2 1590 aa27.98■■■□□ 2.07
CDX4-201ENST00000373514 CNTLNQ9NXG0 1405 aa27.96■■■□□ 2.07
CDX4-201ENST00000373514 PLPPR3Q6T4P5 718 aa27.94■■■□□ 2.06
CDX4-201ENST00000373514 IQGAP3Q86VI3 1631 aa27.93■■■□□ 2.06
CDX4-201ENST00000373514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.92■■■□□ 2.06
CDX4-201ENST00000373514 ESF1Q9H501 851 aaKnown RBP27.92■■■□□ 2.06
CDX4-201ENST00000373514 CFAP65Q6ZU64 1925 aaKnown RBP27.89■■■□□ 2.06
CDX4-201ENST00000373514 CEBPAP49715 358 aaPredicted RBP27.89■■■□□ 2.06
CDX4-201ENST00000373514 WASHC2CQ9Y4E1 1318 aa27.88■■■□□ 2.05
CDX4-201ENST00000373514 TET3O43151 1660 aa27.87■■■□□ 2.05
CDX4-201ENST00000373514 PPP6R1Q9UPN7 881 aa27.87■■■□□ 2.05
CDX4-201ENST00000373514 LMTK2Q8IWU2 1503 aa27.86■■■□□ 2.05
CDX4-201ENST00000373514 ZMYM3Q14202 1370 aa27.86■■■□□ 2.05
CDX4-201ENST00000373514 KANK1Q14678 1352 aa27.86■■■□□ 2.05
CDX4-201ENST00000373514 EFCAB6Q5THR3 1501 aa27.85■■■□□ 2.05
CDX4-201ENST00000373514 TRIM26Q12899 539 aaPredicted RBP27.84■■■□□ 2.05
CDX4-201ENST00000373514 PREX1Q8TCU6 1659 aa27.84■■■□□ 2.05
CDX4-201ENST00000373514 PZPP20742 1482 aa27.82■■■□□ 2.04
CDX4-201ENST00000373514 E9PCH4 1651 aa27.82■■■□□ 2.04
CDX4-201ENST00000373514 SETD5Q9C0A6 1442 aa27.82■■■□□ 2.04
CDX4-201ENST00000373514 AEBP2Q6ZN18 517 aaPredicted RBP27.81■■■□□ 2.04
CDX4-201ENST00000373514 MYO3AQ8NEV4 1616 aa27.79■■■□□ 2.04
CDX4-201ENST00000373514 NUP155O75694 1391 aa27.78■■■□□ 2.04
CDX4-201ENST00000373514 RAB3GAP2Q9H2M9 1393 aa27.77■■■□□ 2.04
CDX4-201ENST00000373514 NPATQ14207 1427 aa27.76■■■□□ 2.03
CDX4-201ENST00000373514 PCGF6Q9BYE7 350 aa27.76■■■□□ 2.03
CDX4-201ENST00000373514 SPATA31D1Q6ZQQ2 1576 aa27.76■■■□□ 2.03
CDX4-201ENST00000373514 ERVK-7P63135 1459 aa27.74■■■□□ 2.03
CDX4-201ENST00000373514 ARHGAP31Q2M1Z3 1444 aa27.73■■■□□ 2.03
CDX4-201ENST00000373514 FBXO31Q5XUX0 539 aaPredicted RBP27.72■■■□□ 2.03
CDX4-201ENST00000373514 SETD1BQ9UPS6 1966 aaKnown RBP27.72■■■□□ 2.03
CDX4-201ENST00000373514 ZNF142P52746 1687 aaPredicted RBP27.72■■■□□ 2.03
CDX4-201ENST00000373514 SYNMO15061 1565 aa27.7■■■□□ 2.03
CDX4-201ENST00000373514 TRIM52Q96A61 297 aa27.69■■■□□ 2.02
CDX4-201ENST00000373514 SPHKAPQ2M3C7 1700 aa27.68■■■□□ 2.02
CDX4-201ENST00000373514 LMTK3Q96Q04 1460 aa27.67■■■□□ 2.02
CDX4-201ENST00000373514 RPRD2Q5VT52 1461 aaKnown RBP27.66■■■□□ 2.02
CDX4-201ENST00000373514 CEP170BQ9Y4F5 1589 aaPredicted RBP27.65■■■□□ 2.02
CDX4-201ENST00000373514 TNRQ92752 1358 aa27.65■■■□□ 2.02
CDX4-201ENST00000373514 UHRF1BP1Q6BDS2 1440 aa27.63■■■□□ 2.01
CDX4-201ENST00000373514 PIK3C2BO00750 1634 aa27.6■■■□□ 2.01
CDX4-201ENST00000373514 NOS1P29475 1434 aa27.6■■■□□ 2.01
CDX4-201ENST00000373514 UGGT1Q9NYU2 1555 aa27.6■■■□□ 2.01
CDX4-201ENST00000373514 MYO5BQ9ULV0 1848 aa27.58■■■□□ 2
CDX4-201ENST00000373514 UBR1Q8IWV7 1749 aa27.57■■■□□ 2
CDX4-201ENST00000373514 A2ML1A8K2U0 1454 aa27.55■■■□□ 2
CDX4-201ENST00000373514 SLC4A1APQ9BWU0 796 aaKnown RBP27.55■■■□□ 2
CDX4-201ENST00000373514 NLRP1Q9C000 1473 aa27.54■■■□□ 2
CDX4-201ENST00000373514 CLTCL1P53675 1640 aa27.53■■■□□ 2
CDX4-201ENST00000373514 PKD2Q13563 968 aa27.52■■■□□ 2
CDX4-201ENST00000373514 TRPM2O94759 1503 aa27.52■■■□□ 2
CDX4-201ENST00000373514 FOXD1Q16676 465 aa27.51■■□□□ 1.99
CDX4-201ENST00000373514 HSPA2P54652 639 aa27.5■■□□□ 1.99
CDX4-201ENST00000373514 MPHOSPH9Q99550 1183 aa27.5■■□□□ 1.99
CDX4-201ENST00000373514 PTPRTO14522 1441 aa27.48■■□□□ 1.99
CDX4-201ENST00000373514 ADGRB3O60242 1522 aa27.48■■□□□ 1.99
CDX4-201ENST00000373514 KDM5AP29375 1690 aaKnown RBP27.47■■□□□ 1.99
CDX4-201ENST00000373514 PLA2R1Q13018 1463 aa27.47■■□□□ 1.99
CDX4-201ENST00000373514 HRCP23327 699 aa27.46■■□□□ 1.99
CDX4-201ENST00000373514 STRCQ7RTU9 1775 aa27.46■■□□□ 1.99
CDX4-201ENST00000373514 TMEM131LA2VDJ0 1609 aa27.45■■□□□ 1.98
CDX4-201ENST00000373514 POLR1AO95602 1720 aaPredicted RBP27.44■■□□□ 1.98
CDX4-201ENST00000373514 ACIN1Q9UKV3 1341 aaKnown RBP27.44■■□□□ 1.98
CDX4-201ENST00000373514 KIF1BO60333 1816 aa27.44■■□□□ 1.98
CDX4-201ENST00000373514 IDI1Q13907 227 aa27.41■■□□□ 1.98
CDX4-201ENST00000373514 SLC52A1Q9NWF4 448 aa27.35■■□□□ 1.97
CDX4-201ENST00000373514 NEURL4Q96JN8 1562 aa27.33■■□□□ 1.97
CDX4-201ENST00000373514 SLIT1O75093 1534 aa27.32■■□□□ 1.96
CDX4-201ENST00000373514 ARHGAP23Q9P227 1491 aa27.3■■□□□ 1.96
CDX4-201ENST00000373514 STAG3Q9UJ98 1225 aa27.3■■□□□ 1.96
CDX4-201ENST00000373514 CCDC144AA2RUR9 1427 aa27.3■■□□□ 1.96
CDX4-201ENST00000373514 CHGAP10645 457 aaKnown RBP27.29■■□□□ 1.96
CDX4-201ENST00000373514 DHX57Q6P158 1386 aaKnown RBP27.29■■□□□ 1.96
CDX4-201ENST00000373514 ANKRD30BQ9BXX2 1392 aa27.27■■□□□ 1.96
CDX4-201ENST00000373514 THEMISQ8N1K5 641 aaPredicted RBP27.26■■□□□ 1.96
CDX4-201ENST00000373514 TMEM2Q9UHN6 1383 aa27.25■■□□□ 1.95
CDX4-201ENST00000373514 IQGAP1P46940 1657 aa27.24■■□□□ 1.95
CDX4-201ENST00000373514 PPLO60437 1756 aa27.24■■□□□ 1.95
CDX4-201ENST00000373514 NCKAP5LQ9HCH0 1330 aa27.24■■□□□ 1.95
CDX4-201ENST00000373514 IFT172Q9UG01 1749 aa27.24■■□□□ 1.95
CDX4-201ENST00000373514 ZFYVE9O95405 1425 aa27.23■■□□□ 1.95
CDX4-201ENST00000373514 SCAF11Q99590 1463 aaKnown RBP27.22■■□□□ 1.95
CDX4-201ENST00000373514 NEXMIFQ5QGS0 1516 aa27.22■■□□□ 1.95
CDX4-201ENST00000373514 RIMS2Q9UQ26 1411 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms