RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 PLA2R1Q13018 1463 aa27.73■■■□□ 2.03
LHX3-202ENST00000371748 KDM2AQ9Y2K7 1162 aa27.72■■■□□ 2.03
LHX3-202ENST00000371748 CCDC7Q96M83 1385 aa27.72■■■□□ 2.03
LHX3-202ENST00000371748 SCAPERQ9BY12 1400 aa27.72■■■□□ 2.03
LHX3-202ENST00000371748 CCER2I3L3R5 266 aa27.7■■■□□ 2.03
LHX3-202ENST00000371748 DCAF11Q8TEB1 546 aa27.7■■■□□ 2.03
LHX3-202ENST00000371748 ATP7AQ04656 1500 aa27.7■■■□□ 2.02
LHX3-202ENST00000371748 POLR1AO95602 1720 aaPredicted RBP27.7■■■□□ 2.02
LHX3-202ENST00000371748 INO80Q9ULG1 1556 aaPredicted RBP27.7■■■□□ 2.02
LHX3-202ENST00000371748 USP47Q96K76 1375 aa27.68■■■□□ 2.02
LHX3-202ENST00000371748 RALGAPBQ86X10 1494 aa27.68■■■□□ 2.02
LHX3-202ENST00000371748 CNTLNQ9NXG0 1405 aa27.66■■■□□ 2.02
LHX3-202ENST00000371748 KDM5CP41229 1560 aa27.66■■■□□ 2.02
LHX3-202ENST00000371748 MYT1LQ9UL68 1186 aa27.65■■■□□ 2.02
LHX3-202ENST00000371748 KIF7Q2M1P5 1343 aa27.64■■■□□ 2.02
LHX3-202ENST00000371748 RGL3Q3MIN7 710 aa27.62■■■□□ 2.01
LHX3-202ENST00000371748 BCORL1Q5H9F3 1711 aa27.61■■■□□ 2.01
LHX3-202ENST00000371748 SUPT16HQ9Y5B9 1047 aaKnown RBP27.6■■■□□ 2.01
LHX3-202ENST00000371748 CARD11Q9BXL7 1154 aa27.6■■■□□ 2.01
LHX3-202ENST00000371748 DEPDC5O75140 1603 aa27.6■■■□□ 2.01
LHX3-202ENST00000371748 ATP10AO60312 1499 aa27.59■■■□□ 2.01
LHX3-202ENST00000371748 E9PCH4 1651 aa27.59■■■□□ 2.01
LHX3-202ENST00000371748 CD109Q6YHK3 1445 aa27.59■■■□□ 2.01
LHX3-202ENST00000371748 A2MP01023 1474 aa27.56■■■□□ 2
LHX3-202ENST00000371748 KIDINS220Q9ULH0 1771 aa27.56■■■□□ 2
LHX3-202ENST00000371748 PRAG1Q86YV5 1406 aa27.54■■■□□ 2
LHX3-202ENST00000371748 KIF3BO15066 747 aa27.53■■■□□ 2
LHX3-202ENST00000371748 TRPM1Q7Z4N2 1603 aa27.53■■■□□ 2
LHX3-202ENST00000371748 ZNF518AQ6AHZ1 1483 aa27.53■■■□□ 2
LHX3-202ENST00000371748 CFAP74Q9C0B2 1584 aa27.53■■■□□ 2
LHX3-202ENST00000371748 DHX29Q7Z478 1369 aaKnown RBP27.52■■■□□ 2
LHX3-202ENST00000371748 ROCK2O75116 1388 aaKnown RBP27.52■■■□□ 2
LHX3-202ENST00000371748 EIF2AK4Q9P2K8 1649 aaKnown RBP27.51■■□□□ 1.99
LHX3-202ENST00000371748 TET3O43151 1660 aa27.5■■□□□ 1.99
LHX3-202ENST00000371748 POLR3GLQ9BT43 218 aa27.49■■□□□ 1.99
LHX3-202ENST00000371748 VWDEQ8N2E2 1590 aa27.48■■□□□ 1.99
LHX3-202ENST00000371748 KANK1Q14678 1352 aa27.48■■□□□ 1.99
LHX3-202ENST00000371748 SPHKAPQ2M3C7 1700 aa27.48■■□□□ 1.99
LHX3-202ENST00000371748 MROH1Q8NDA8 1641 aa27.47■■□□□ 1.99
LHX3-202ENST00000371748 ST20-MTHFSA0A0A6YYL1 179 aa27.46■■□□□ 1.99
LHX3-202ENST00000371748 POGZQ7Z3K3 1410 aa27.46■■□□□ 1.99
LHX3-202ENST00000371748 TRPM2O94759 1503 aa27.46■■□□□ 1.99
LHX3-202ENST00000371748 PRDM15P57071 1507 aaPredicted RBP27.45■■□□□ 1.98
LHX3-202ENST00000371748 NBPF1Q3BBV0 1214 aa27.43■■□□□ 1.98
LHX3-202ENST00000371748 CYB5RLQ6IPT4 315 aa27.43■■□□□ 1.98
LHX3-202ENST00000371748 PRKRIP1Q9H875 184 aaPredicted RBP27.43■■□□□ 1.98
LHX3-202ENST00000371748 PTPRTO14522 1441 aa27.42■■□□□ 1.98
LHX3-202ENST00000371748 CEP152O94986 1710 aa27.41■■□□□ 1.98
LHX3-202ENST00000371748 CLTCL1P53675 1640 aa27.41■■□□□ 1.98
LHX3-202ENST00000371748 ARID4BQ4LE39 1312 aaPredicted RBP27.4■■□□□ 1.98
LHX3-202ENST00000371748 HECW2Q9P2P5 1572 aa27.38■■□□□ 1.97
LHX3-202ENST00000371748 MLH3Q9UHC1 1453 aa27.37■■□□□ 1.97
LHX3-202ENST00000371748 CCDC184Q52MB2 194 aa27.37■■□□□ 1.97
LHX3-202ENST00000371748 RIMBP3CA6NJZ7 1639 aa27.37■■□□□ 1.97
LHX3-202ENST00000371748 RIMBP3BA6NNM3 1639 aa27.37■■□□□ 1.97
LHX3-202ENST00000371748 RIMBP3Q9UFD9 1639 aa27.37■■□□□ 1.97
LHX3-202ENST00000371748 GPRASP1Q5JY77 1395 aa27.36■■□□□ 1.97
LHX3-202ENST00000371748 NEO1Q92859 1461 aa27.35■■□□□ 1.97
LHX3-202ENST00000371748 LAMC1P11047 1609 aa27.34■■□□□ 1.97
LHX3-202ENST00000371748 FRMPD1Q5SYB0 1578 aa27.34■■□□□ 1.97
LHX3-202ENST00000371748 RAPGEF3O95398 923 aa27.33■■□□□ 1.97
LHX3-202ENST00000371748 ABCA6Q8N139 1617 aa27.32■■□□□ 1.96
LHX3-202ENST00000371748 RNF17Q9BXT8 1623 aaKnown RBP27.32■■□□□ 1.96
LHX3-202ENST00000371748 EFCAB6Q5THR3 1501 aa27.32■■□□□ 1.96
LHX3-202ENST00000371748 PPRC1Q5VV67 1664 aaKnown RBP27.31■■□□□ 1.96
LHX3-202ENST00000371748 MAP3K4Q9Y6R4 1608 aa27.31■■□□□ 1.96
LHX3-202ENST00000371748 MADDQ8WXG6 1647 aa27.3■■□□□ 1.96
LHX3-202ENST00000371748 CNGB1Q14028 1251 aaPredicted RBP27.29■■□□□ 1.96
LHX3-202ENST00000371748 UGGT1Q9NYU2 1555 aa27.29■■□□□ 1.96
LHX3-202ENST00000371748 LMTK2Q8IWU2 1503 aa27.26■■□□□ 1.95
LHX3-202ENST00000371748 MRS2Q9HD23 443 aa27.26■■□□□ 1.95
LHX3-202ENST00000371748 GGT6Q6P531 493 aa27.26■■□□□ 1.95
LHX3-202ENST00000371748 TSHZ2Q9NRE2 1034 aa27.25■■□□□ 1.95
LHX3-202ENST00000371748 HNRNPUQ00839 825 aaKnown RBP eCLIP27.24■■□□□ 1.95
LHX3-202ENST00000371748 RICTORQ6R327 1708 aa27.24■■□□□ 1.95
LHX3-202ENST00000371748 KIF1BO60333 1816 aa27.22■■□□□ 1.95
LHX3-202ENST00000371748 CFAP65Q6ZU64 1925 aaKnown RBP27.22■■□□□ 1.95
LHX3-202ENST00000371748 GLI2P10070 1586 aa27.21■■□□□ 1.95
LHX3-202ENST00000371748 DIP2CQ9Y2E4 1556 aa27.2■■□□□ 1.94
LHX3-202ENST00000371748 FAM9BQ8IZU0 186 aa27.2■■□□□ 1.94
LHX3-202ENST00000371748 TESK2Q96S53 571 aa27.2■■□□□ 1.94
LHX3-202ENST00000371748 NEURL4Q96JN8 1562 aa27.18■■□□□ 1.94
LHX3-202ENST00000371748 COL17A1Q9UMD9 1497 aaPredicted RBP27.17■■□□□ 1.94
LHX3-202ENST00000371748 MROH2AA6NES4 1674 aa27.17■■□□□ 1.94
LHX3-202ENST00000371748 DISP3Q9P2K9 1392 aa27.16■■□□□ 1.94
LHX3-202ENST00000371748 STAC3Q96MF2 364 aa27.16■■□□□ 1.94
LHX3-202ENST00000371748 NPATQ14207 1427 aa27.16■■□□□ 1.94
LHX3-202ENST00000371748 IQGAP1P46940 1657 aa27.15■■□□□ 1.94
LHX3-202ENST00000371748 FAM69CQ0P6D2 419 aa27.15■■□□□ 1.94
LHX3-202ENST00000371748 DIP2BQ9P265 1576 aa27.14■■□□□ 1.94
LHX3-202ENST00000371748 ABCC3O15438 1527 aa27.14■■□□□ 1.93
LHX3-202ENST00000371748 WASHC2CQ9Y4E1 1318 aa27.14■■□□□ 1.93
LHX3-202ENST00000371748 YEATS2Q9ULM3 1422 aa27.12■■□□□ 1.93
LHX3-202ENST00000371748 TSPOAP1O95153 1857 aa27.12■■□□□ 1.93
LHX3-202ENST00000371748 IFT172Q9UG01 1749 aa27.11■■□□□ 1.93
LHX3-202ENST00000371748 CAMSAP1Q5T5Y3 1602 aa27.1■■□□□ 1.93
LHX3-202ENST00000371748 TMF1P82094 1093 aa27.09■■□□□ 1.93
LHX3-202ENST00000371748 KIAA1210Q9ULL0 1709 aa27.08■■□□□ 1.93
LHX3-202ENST00000371748 MYOM2P54296 1465 aa27.08■■□□□ 1.93
LHX3-202ENST00000371748 ADGRF5Q8IZF2 1346 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms