RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 DCAF11Q8TEB1 546 aa33.3■■■□□ 2.92
LHX3-201ENST00000371746 INO80Q9ULG1 1556 aaPredicted RBP33.3■■■□□ 2.92
LHX3-201ENST00000371746 CD109Q6YHK3 1445 aa33.29■■■□□ 2.92
LHX3-201ENST00000371746 ANP32CO43423 234 aa33.29■■■□□ 2.92
LHX3-201ENST00000371746 UHRF1BP1Q6BDS2 1440 aa33.27■■■□□ 2.92
LHX3-201ENST00000371746 RGL3Q3MIN7 710 aa33.22■■■□□ 2.91
LHX3-201ENST00000371746 CYB5RLQ6IPT4 315 aa33.22■■■□□ 2.91
LHX3-201ENST00000371746 GTF3C3Q9Y5Q9 886 aa33.22■■■□□ 2.91
LHX3-201ENST00000371746 CCDC7Q96M83 1385 aa33.22■■■□□ 2.91
LHX3-201ENST00000371746 USP47Q96K76 1375 aa33.21■■■□□ 2.91
LHX3-201ENST00000371746 RALGAPBQ86X10 1494 aa33.19■■■□□ 2.9
LHX3-201ENST00000371746 KIF3BO15066 747 aa33.18■■■□□ 2.9
LHX3-201ENST00000371746 ZNF518AQ6AHZ1 1483 aa33.17■■■□□ 2.9
LHX3-201ENST00000371746 ATP10AO60312 1499 aa33.15■■■□□ 2.9
LHX3-201ENST00000371746 KIF7Q2M1P5 1343 aa33.15■■■□□ 2.9
LHX3-201ENST00000371746 DHX29Q7Z478 1369 aaKnown RBP33.15■■■□□ 2.9
LHX3-201ENST00000371746 CARD11Q9BXL7 1154 aa33.13■■■□□ 2.89
LHX3-201ENST00000371746 DEPDC5O75140 1603 aa33.12■■■□□ 2.89
LHX3-201ENST00000371746 KIDINS220Q9ULH0 1771 aa33.11■■■□□ 2.89
LHX3-201ENST00000371746 CCER2I3L3R5 266 aa33.11■■■□□ 2.89
LHX3-201ENST00000371746 POGZQ7Z3K3 1410 aa33.1■■■□□ 2.89
LHX3-201ENST00000371746 A2MP01023 1474 aa33.1■■■□□ 2.89
LHX3-201ENST00000371746 CNTLNQ9NXG0 1405 aa33.1■■■□□ 2.89
LHX3-201ENST00000371746 KDM5CP41229 1560 aa33.1■■■□□ 2.89
LHX3-201ENST00000371746 E9PCH4 1651 aa33.09■■■□□ 2.89
LHX3-201ENST00000371746 CFAP74Q9C0B2 1584 aa33.08■■■□□ 2.89
LHX3-201ENST00000371746 PRAG1Q86YV5 1406 aa33.07■■■□□ 2.88
LHX3-201ENST00000371746 KANK1Q14678 1352 aa33.06■■■□□ 2.88
LHX3-201ENST00000371746 ROCK2O75116 1388 aaKnown RBP33.05■■■□□ 2.88
LHX3-201ENST00000371746 RIMBP3CA6NJZ7 1639 aa33.04■■■□□ 2.88
LHX3-201ENST00000371746 RIMBP3BA6NNM3 1639 aa33.04■■■□□ 2.88
LHX3-201ENST00000371746 RIMBP3Q9UFD9 1639 aa33.04■■■□□ 2.88
LHX3-201ENST00000371746 VWDEQ8N2E2 1590 aa33.02■■■□□ 2.88
LHX3-201ENST00000371746 BCORL1Q5H9F3 1711 aa33.02■■■□□ 2.88
LHX3-201ENST00000371746 EIF2AK4Q9P2K8 1649 aaKnown RBP33.01■■■□□ 2.88
LHX3-201ENST00000371746 MROH1Q8NDA8 1641 aa33.01■■■□□ 2.87
LHX3-201ENST00000371746 PRDM15P57071 1507 aaPredicted RBP33.01■■■□□ 2.87
LHX3-201ENST00000371746 RAPGEF3O95398 923 aa33.01■■■□□ 2.87
LHX3-201ENST00000371746 TET3O43151 1660 aa32.99■■■□□ 2.87
LHX3-201ENST00000371746 NEO1Q92859 1461 aa32.98■■■□□ 2.87
LHX3-201ENST00000371746 POLR3GLQ9BT43 218 aa32.98■■■□□ 2.87
LHX3-201ENST00000371746 TRPM2O94759 1503 aa32.97■■■□□ 2.87
LHX3-201ENST00000371746 MLH3Q9UHC1 1453 aa32.97■■■□□ 2.87
LHX3-201ENST00000371746 PTPRTO14522 1441 aa32.97■■■□□ 2.87
LHX3-201ENST00000371746 ST20-MTHFSA0A0A6YYL1 179 aa32.97■■■□□ 2.87
LHX3-201ENST00000371746 NBPF1Q3BBV0 1214 aa32.97■■■□□ 2.87
LHX3-201ENST00000371746 POLR1AO95602 1720 aaPredicted RBP32.97■■■□□ 2.87
LHX3-201ENST00000371746 TRPM1Q7Z4N2 1603 aa32.94■■■□□ 2.86
LHX3-201ENST00000371746 HECW2Q9P2P5 1572 aa32.94■■■□□ 2.86
LHX3-201ENST00000371746 SPHKAPQ2M3C7 1700 aa32.92■■■□□ 2.86
LHX3-201ENST00000371746 FRMPD1Q5SYB0 1578 aa32.91■■■□□ 2.86
LHX3-201ENST00000371746 CLTCL1P53675 1640 aa32.89■■■□□ 2.86
LHX3-201ENST00000371746 MAP3K4Q9Y6R4 1608 aa32.88■■■□□ 2.85
LHX3-201ENST00000371746 ABCA6Q8N139 1617 aa32.86■■■□□ 2.85
LHX3-201ENST00000371746 GGT6Q6P531 493 aa32.86■■■□□ 2.85
LHX3-201ENST00000371746 PRKRIP1Q9H875 184 aaPredicted RBP32.86■■■□□ 2.85
LHX3-201ENST00000371746 GPRASP1Q5JY77 1395 aa32.86■■■□□ 2.85
LHX3-201ENST00000371746 EFCAB6Q5THR3 1501 aa32.84■■■□□ 2.85
LHX3-201ENST00000371746 ARID4BQ4LE39 1312 aaPredicted RBP32.84■■■□□ 2.85
LHX3-201ENST00000371746 FAM69CQ0P6D2 419 aa32.84■■■□□ 2.85
LHX3-201ENST00000371746 RNF17Q9BXT8 1623 aaKnown RBP32.83■■■□□ 2.85
LHX3-201ENST00000371746 UGGT1Q9NYU2 1555 aa32.82■■■□□ 2.84
LHX3-201ENST00000371746 PPRC1Q5VV67 1664 aaKnown RBP32.81■■■□□ 2.84
LHX3-201ENST00000371746 CEP152O94986 1710 aa32.8■■■□□ 2.84
LHX3-201ENST00000371746 GLI2P10070 1586 aa32.8■■■□□ 2.84
LHX3-201ENST00000371746 LMTK2Q8IWU2 1503 aa32.78■■■□□ 2.84
LHX3-201ENST00000371746 CCDC184Q52MB2 194 aa32.78■■■□□ 2.84
LHX3-201ENST00000371746 CNGB1Q14028 1251 aaPredicted RBP32.75■■■□□ 2.83
LHX3-201ENST00000371746 RICTORQ6R327 1708 aa32.74■■■□□ 2.83
LHX3-201ENST00000371746 DIP2BQ9P265 1576 aa32.73■■■□□ 2.83
LHX3-201ENST00000371746 DIP2CQ9Y2E4 1556 aa32.73■■■□□ 2.83
LHX3-201ENST00000371746 MADDQ8WXG6 1647 aa32.73■■■□□ 2.83
LHX3-201ENST00000371746 YEATS2Q9ULM3 1422 aa32.72■■■□□ 2.83
LHX3-201ENST00000371746 LAMC1P11047 1609 aa32.71■■■□□ 2.83
LHX3-201ENST00000371746 NPATQ14207 1427 aa32.71■■■□□ 2.83
LHX3-201ENST00000371746 WASHC2CQ9Y4E1 1318 aa32.71■■■□□ 2.83
LHX3-201ENST00000371746 TESK2Q96S53 571 aa32.67■■■□□ 2.82
LHX3-201ENST00000371746 ABCC3O15438 1527 aa32.66■■■□□ 2.82
LHX3-201ENST00000371746 STAC3Q96MF2 364 aa32.65■■■□□ 2.82
LHX3-201ENST00000371746 MRS2Q9HD23 443 aa32.64■■■□□ 2.82
LHX3-201ENST00000371746 DISP3Q9P2K9 1392 aa32.62■■■□□ 2.81
LHX3-201ENST00000371746 NEURL4Q96JN8 1562 aa32.61■■■□□ 2.81
LHX3-201ENST00000371746 TSPOAP1O95153 1857 aa32.6■■■□□ 2.81
LHX3-201ENST00000371746 CHGAP10645 457 aaKnown RBP32.59■■■□□ 2.81
LHX3-201ENST00000371746 HNRNPUQ00839 825 aaKnown RBP eCLIP32.59■■■□□ 2.81
LHX3-201ENST00000371746 CFAP65Q6ZU64 1925 aaKnown RBP32.59■■■□□ 2.81
LHX3-201ENST00000371746 COL17A1Q9UMD9 1497 aaPredicted RBP32.59■■■□□ 2.81
LHX3-201ENST00000371746 ADGRF5Q8IZF2 1346 aa32.58■■■□□ 2.81
LHX3-201ENST00000371746 KIF1BO60333 1816 aa32.56■■■□□ 2.8
LHX3-201ENST00000371746 MROH2AA6NES4 1674 aa32.56■■■□□ 2.8
LHX3-201ENST00000371746 FAM9BQ8IZU0 186 aa32.55■■■□□ 2.8
LHX3-201ENST00000371746 CAMSAP1Q5T5Y3 1602 aa32.53■■■□□ 2.8
LHX3-201ENST00000371746 MYOM2P54296 1465 aa32.53■■■□□ 2.8
LHX3-201ENST00000371746 CFAP70Q5T0N1 1121 aa32.52■■■□□ 2.8
LHX3-201ENST00000371746 ADGRB3O60242 1522 aa32.52■■■□□ 2.8
LHX3-201ENST00000371746 TMF1P82094 1093 aa32.51■■■□□ 2.8
LHX3-201ENST00000371746 ZMYM4Q5VZL5 1548 aa32.51■■■□□ 2.8
LHX3-201ENST00000371746 SCAF11Q99590 1463 aaKnown RBP32.5■■■□□ 2.79
LHX3-201ENST00000371746 IQGAP1P46940 1657 aa32.49■■■□□ 2.79
LHX3-201ENST00000371746 NOS1P29475 1434 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms