RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 CRBNQ96SW2 442 aa11.52□□□□□ -0.57
SMARCA1-203ENST00000371123 ARHGEF11O15085 1522 aa11.52□□□□□ -0.57
SMARCA1-203ENST00000371123 ERBB4Q15303 1308 aa11.51□□□□□ -0.57
SMARCA1-203ENST00000371123 UHRF1BP1LA0JNW5 1464 aa11.5□□□□□ -0.57
SMARCA1-203ENST00000371123 RCAN3Q9UKA8 241 aa11.5□□□□□ -0.57
SMARCA1-203ENST00000371123 FYCO1Q9BQS8 1478 aa11.5□□□□□ -0.57
SMARCA1-203ENST00000371123 FMN1Q68DA7 1419 aa11.5□□□□□ -0.57
SMARCA1-203ENST00000371123 ERCC6L2Q5T890 1561 aa11.49□□□□□ -0.57
SMARCA1-203ENST00000371123 VIRMAQ69YN4 1812 aaKnown RBP11.49□□□□□ -0.57
SMARCA1-203ENST00000371123 ABCA8O94911 1581 aa11.49□□□□□ -0.57
SMARCA1-203ENST00000371123 SEC24BO95487 1268 aa11.49□□□□□ -0.57
SMARCA1-203ENST00000371123 CHGAP10645 457 aaKnown RBP11.49□□□□□ -0.57
SMARCA1-203ENST00000371123 CASKIN1Q8WXD9 1431 aa11.49□□□□□ -0.57
SMARCA1-203ENST00000371123 PODXL2Q9NZ53 605 aa11.49□□□□□ -0.57
SMARCA1-203ENST00000371123 KDM5CP41229 1560 aa11.48□□□□□ -0.57
SMARCA1-203ENST00000371123 NEUROD2Q15784 382 aa11.48□□□□□ -0.57
SMARCA1-203ENST00000371123 NLRP1Q9C000 1473 aa11.48□□□□□ -0.57
SMARCA1-203ENST00000371123 E9PCH4 1651 aa11.48□□□□□ -0.57
SMARCA1-203ENST00000371123 XRCC6P12956 609 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMARCA1-203ENST00000371123 CC2D1BQ5T0F9 858 aaKnown RBP11.48□□□□□ -0.57
SMARCA1-203ENST00000371123 ANKRD30BQ9BXX2 1392 aa11.48□□□□□ -0.57
SMARCA1-203ENST00000371123 PRDM4Q9UKN5 801 aa11.47□□□□□ -0.57
SMARCA1-203ENST00000371123 RPRD2Q5VT52 1461 aaKnown RBP11.47□□□□□ -0.57
SMARCA1-203ENST00000371123 MBD5Q9P267 1494 aa11.47□□□□□ -0.57
SMARCA1-203ENST00000371123 MPHOSPH9Q99550 1183 aa11.47□□□□□ -0.57
SMARCA1-203ENST00000371123 TNNT2P45379 298 aaPredicted RBP11.46□□□□□ -0.57
SMARCA1-203ENST00000371123 RGS3P49796 1198 aa11.46□□□□□ -0.58
SMARCA1-203ENST00000371123 CANXP27824 592 aaKnown RBP11.45□□□□□ -0.58
SMARCA1-203ENST00000371123 PLPPR3Q6T4P5 718 aa11.44□□□□□ -0.58
SMARCA1-203ENST00000371123 ANTXR1Q9H6X2 564 aa11.44□□□□□ -0.58
SMARCA1-203ENST00000371123 ADCY10Q96PN6 1610 aa11.44□□□□□ -0.58
SMARCA1-203ENST00000371123 DDRGK1Q96HY6 314 aa11.43□□□□□ -0.58
SMARCA1-203ENST00000371123 FSD2A1L4K1 749 aa11.43□□□□□ -0.58
SMARCA1-203ENST00000371123 OSCARQ8IYS5 282 aa11.43□□□□□ -0.58
SMARCA1-203ENST00000371123 HSP90AA2PQ14568 343 aaPredicted RBP11.42□□□□□ -0.58
SMARCA1-203ENST00000371123 DNAJC5Q9H3Z4 198 aa11.41□□□□□ -0.58
SMARCA1-203ENST00000371123 CLCN1P35523 988 aa11.41□□□□□ -0.58
SMARCA1-203ENST00000371123 SPRYD3Q8NCJ5 442 aa11.41□□□□□ -0.58
SMARCA1-203ENST00000371123 RRP9O43818 475 aaKnown RBP11.4□□□□□ -0.59
SMARCA1-203ENST00000371123 MIA2Q96PC5 1412 aa11.39□□□□□ -0.59
SMARCA1-203ENST00000371123 NAP1L5Q96NT1 182 aaPredicted RBP11.39□□□□□ -0.59
SMARCA1-203ENST00000371123 ARID4BQ4LE39 1312 aaPredicted RBP11.39□□□□□ -0.59
SMARCA1-203ENST00000371123 TCOF1Q13428 1488 aaKnown RBP11.39□□□□□ -0.59
SMARCA1-203ENST00000371123 ABCC2Q92887 1545 aa11.39□□□□□ -0.59
SMARCA1-203ENST00000371123 USP47Q96K76 1375 aa11.38□□□□□ -0.59
SMARCA1-203ENST00000371123 CARD11Q9BXL7 1154 aa11.38□□□□□ -0.59
SMARCA1-203ENST00000371123 SLC24A1O60721 1099 aa11.38□□□□□ -0.59
SMARCA1-203ENST00000371123 FAM161AQ3B820 660 aa11.38□□□□□ -0.59
SMARCA1-203ENST00000371123 RAPGEF6Q8TEU7 1601 aa11.38□□□□□ -0.59
SMARCA1-203ENST00000371123 CHMP7Q8WUX9 453 aaPredicted RBP11.37□□□□□ -0.59
SMARCA1-203ENST00000371123 PRG4Q92954 1404 aaPredicted RBP11.36□□□□□ -0.59
SMARCA1-203ENST00000371123 SUPT6HQ7KZ85 1726 aaKnown RBP11.36□□□□□ -0.59
SMARCA1-203ENST00000371123 RBM10P98175 930 aaKnown RBP11.36□□□□□ -0.59
SMARCA1-203ENST00000371123 KTN1Q86UP2 1357 aaKnown RBP11.36□□□□□ -0.59
SMARCA1-203ENST00000371123 TPRNQ4KMQ1 711 aa11.35□□□□□ -0.59
SMARCA1-203ENST00000371123 SLKQ9H2G2 1235 aaPredicted RBP11.35□□□□□ -0.59
SMARCA1-203ENST00000371123 KIF14Q15058 1648 aa11.35□□□□□ -0.59
SMARCA1-203ENST00000371123 GLI2P10070 1586 aa11.35□□□□□ -0.59
SMARCA1-203ENST00000371123 PZPP20742 1482 aa11.35□□□□□ -0.59
SMARCA1-203ENST00000371123 BRD4O60885 1362 aaPredicted RBP11.35□□□□□ -0.59
SMARCA1-203ENST00000371123 IGHDP01880 384 aa11.34□□□□□ -0.59
SMARCA1-203ENST00000371123 BLMP54132 1417 aaPredicted RBP11.34□□□□□ -0.59
SMARCA1-203ENST00000371123 ZNF644Q9H582 1327 aaPredicted RBP11.34□□□□□ -0.59
SMARCA1-203ENST00000371123 ZCCHC11Q5TAX3 1644 aaKnown RBP11.34□□□□□ -0.59
SMARCA1-203ENST00000371123 HSP90AA1P07900 732 aaKnown RBP11.33□□□□□ -0.6
SMARCA1-203ENST00000371123 A0A0U1RQG5 324 aaPredicted RBP11.33□□□□□ -0.6
SMARCA1-203ENST00000371123 MYBBP1AQ9BQG0 1328 aaKnown RBP11.33□□□□□ -0.6
SMARCA1-203ENST00000371123 AAMPQ13685 434 aa11.32□□□□□ -0.6
SMARCA1-203ENST00000371123 CARMIL2Q6F5E8 1435 aa11.32□□□□□ -0.6
SMARCA1-203ENST00000371123 PNNQ9H307 717 aaKnown RBP11.32□□□□□ -0.6
SMARCA1-203ENST00000371123 PARD3Q8TEW0 1356 aa11.32□□□□□ -0.6
SMARCA1-203ENST00000371123 PLEKHH1Q9ULM0 1364 aa11.32□□□□□ -0.6
SMARCA1-203ENST00000371123 GZF1Q9H116 711 aaPredicted RBP11.32□□□□□ -0.6
SMARCA1-203ENST00000371123 CFDP1Q9UEE9 299 aaPredicted RBP11.31□□□□□ -0.6
SMARCA1-203ENST00000371123 KIF13AQ9H1H9 1805 aa11.31□□□□□ -0.6
SMARCA1-203ENST00000371123 PER1O15534 1290 aaPredicted RBP11.31□□□□□ -0.6
SMARCA1-203ENST00000371123 RIPK4P57078 832 aa11.31□□□□□ -0.6
SMARCA1-203ENST00000371123 GAS2L3Q86XJ1 694 aa11.31□□□□□ -0.6
SMARCA1-203ENST00000371123 ZMYM4Q5VZL5 1548 aa11.3□□□□□ -0.6
SMARCA1-203ENST00000371123 JPH4Q96JJ6 628 aa11.3□□□□□ -0.6
SMARCA1-203ENST00000371123 GLIPR1L2Q4G1C9 344 aa11.3□□□□□ -0.6
SMARCA1-203ENST00000371123 SPINK5Q9NQ38 1064 aaPredicted RBP11.3□□□□□ -0.6
SMARCA1-203ENST00000371123 KIF15Q9NS87 1388 aa11.3□□□□□ -0.6
SMARCA1-203ENST00000371123 PKD2Q13563 968 aa11.29□□□□□ -0.6
SMARCA1-203ENST00000371123 RTEL1-TNFRSF6BF6WH68 1400 aa11.29□□□□□ -0.6
SMARCA1-203ENST00000371123 SAFB2Q14151 953 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMARCA1-203ENST00000371123 CENPQQ7L2Z9 268 aaPredicted RBP11.29□□□□□ -0.6
SMARCA1-203ENST00000371123 EHBP1L1Q8N3D4 1523 aa11.28□□□□□ -0.6
SMARCA1-203ENST00000371123 DUSP27Q5VZP5 1158 aa11.28□□□□□ -0.6
SMARCA1-203ENST00000371123 MAP3K4Q9Y6R4 1608 aa11.28□□□□□ -0.6
SMARCA1-203ENST00000371123 NUP153P49790 1475 aaKnown RBP11.28□□□□□ -0.6
SMARCA1-203ENST00000371123 PPRC1Q5VV67 1664 aaKnown RBP11.28□□□□□ -0.6
SMARCA1-203ENST00000371123 TBC1D2Q9BYX2 928 aa11.28□□□□□ -0.6
SMARCA1-203ENST00000371123 TSPY4P0CV99 314 aa11.27□□□□□ -0.6
SMARCA1-203ENST00000371123 TSPY10P0CW01 314 aa11.27□□□□□ -0.6
SMARCA1-203ENST00000371123 CCDC146Q8IYE0 955 aa11.27□□□□□ -0.61
SMARCA1-203ENST00000371123 ST20-MTHFSA0A0A6YYL1 179 aa11.27□□□□□ -0.61
SMARCA1-203ENST00000371123 ZNF521Q96K83 1311 aa11.26□□□□□ -0.61
SMARCA1-203ENST00000371123 CAMSAP2Q08AD1 1489 aa11.26□□□□□ -0.61
SMARCA1-203ENST00000371123 WDR43Q15061 677 aaKnown RBP eCLIP11.26□□□□□ -0.612e-6■■■■■ 28
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms