RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 E9PCH4 1651 aa14.04□□□□□ -0.16
LYSMD1-201ENST00000368908 RRP1P56182 461 aaKnown RBP14.03□□□□□ -0.16
LYSMD1-201ENST00000368908 BRD4O60885 1362 aaPredicted RBP14.02□□□□□ -0.16
LYSMD1-201ENST00000368908 USP47Q96K76 1375 aa14.02□□□□□ -0.16
LYSMD1-201ENST00000368908 NEFMP07197 916 aa14.02□□□□□ -0.16
LYSMD1-201ENST00000368908 BACH2Q9BYV9 841 aa14.02□□□□□ -0.16
LYSMD1-201ENST00000368908 PDE4AP27815 886 aa14.02□□□□□ -0.17
LYSMD1-201ENST00000368908 ADGBQ8N7X0 1667 aa14.01□□□□□ -0.17
LYSMD1-201ENST00000368908 MAP3K4Q9Y6R4 1608 aa14.01□□□□□ -0.17
LYSMD1-201ENST00000368908 KIF15Q9NS87 1388 aa14.01□□□□□ -0.17
LYSMD1-201ENST00000368908 PZPP20742 1482 aa14□□□□□ -0.17
LYSMD1-201ENST00000368908 ABCA9Q8IUA7 1624 aa14□□□□□ -0.17
LYSMD1-201ENST00000368908 PLEKHD1A6NEE1 506 aa14□□□□□ -0.17
LYSMD1-201ENST00000368908 DDRGK1Q96HY6 314 aa14□□□□□ -0.17
LYSMD1-201ENST00000368908 RALGAPBQ86X10 1494 aa14□□□□□ -0.17
LYSMD1-201ENST00000368908 ABCC5O15440 1437 aa13.99□□□□□ -0.17
LYSMD1-201ENST00000368908 TROQ12816 1431 aaPredicted RBP13.99□□□□□ -0.17
LYSMD1-201ENST00000368908 UHRF1BP1Q6BDS2 1440 aa13.99□□□□□ -0.17
LYSMD1-201ENST00000368908 FOXD1Q16676 465 aa13.99□□□□□ -0.17
LYSMD1-201ENST00000368908 TRHP20396 242 aaPredicted RBP13.98□□□□□ -0.17
LYSMD1-201ENST00000368908 ZMYM4Q5VZL5 1548 aa13.98□□□□□ -0.17
LYSMD1-201ENST00000368908 PDE3BQ13370 1112 aa13.98□□□□□ -0.17
LYSMD1-201ENST00000368908 TMC1Q8TDI8 760 aa13.98□□□□□ -0.17
LYSMD1-201ENST00000368908 FAM69CQ0P6D2 419 aa13.97□□□□□ -0.17
LYSMD1-201ENST00000368908 ARHGEF12Q9NZN5 1544 aa13.97□□□□□ -0.17
LYSMD1-201ENST00000368908 INSRP06213 1382 aa13.96□□□□□ -0.17
LYSMD1-201ENST00000368908 KIAA1107Q9UPP5 1409 aa13.96□□□□□ -0.17
LYSMD1-201ENST00000368908 EXOC6Q8TAG9 804 aa13.96□□□□□ -0.17
LYSMD1-201ENST00000368908 MYBBP1AQ9BQG0 1328 aaKnown RBP13.96□□□□□ -0.17
LYSMD1-201ENST00000368908 NPM2Q86SE8 214 aaKnown RBP13.96□□□□□ -0.18
LYSMD1-201ENST00000368908 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.18
LYSMD1-201ENST00000368908 LAS1LQ9Y4W2 734 aaKnown RBP13.96□□□□□ -0.18
LYSMD1-201ENST00000368908 PPRC1Q5VV67 1664 aaKnown RBP13.95□□□□□ -0.18
LYSMD1-201ENST00000368908 RALBP1Q15311 655 aa13.95□□□□□ -0.18
LYSMD1-201ENST00000368908 RCAN3Q9UKA8 241 aa13.95□□□□□ -0.18
LYSMD1-201ENST00000368908 CROCC2H7BZ55 1655 aa13.94□□□□□ -0.18
LYSMD1-201ENST00000368908 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
LYSMD1-201ENST00000368908 ADGRL2O95490 1459 aa13.93□□□□□ -0.18
LYSMD1-201ENST00000368908 ARAP3Q8WWN8 1544 aa13.92□□□□□ -0.18
LYSMD1-201ENST00000368908 ITSN2Q9NZM3 1697 aa13.92□□□□□ -0.18
LYSMD1-201ENST00000368908 TTC37Q6PGP7 1564 aa13.92□□□□□ -0.18
LYSMD1-201ENST00000368908 CD109Q6YHK3 1445 aa13.92□□□□□ -0.18
LYSMD1-201ENST00000368908 GSE1Q14687 1217 aa13.91□□□□□ -0.18
LYSMD1-201ENST00000368908 RTN4Q9NQC3 1192 aaKnown RBP13.91□□□□□ -0.18
LYSMD1-201ENST00000368908 CFAP74Q9C0B2 1584 aa13.91□□□□□ -0.18
LYSMD1-201ENST00000368908 TSPOAP1O95153 1857 aa13.91□□□□□ -0.18
LYSMD1-201ENST00000368908 MYO5CQ9NQX4 1742 aa13.91□□□□□ -0.18
LYSMD1-201ENST00000368908 PLEKHH2Q8IVE3 1493 aa13.9□□□□□ -0.18
LYSMD1-201ENST00000368908 UBE2Q2Q8WVN8 375 aa13.89□□□□□ -0.19
LYSMD1-201ENST00000368908 PARD3Q8TEW0 1356 aa13.88□□□□□ -0.19
LYSMD1-201ENST00000368908 NEO1Q92859 1461 aa13.87□□□□□ -0.19
LYSMD1-201ENST00000368908 PREX2Q70Z35 1606 aa13.87□□□□□ -0.19
LYSMD1-201ENST00000368908 BLMP54132 1417 aaPredicted RBP13.86□□□□□ -0.19
LYSMD1-201ENST00000368908 KDM5DQ9BY66 1539 aa13.86□□□□□ -0.19
LYSMD1-201ENST00000368908 NLRP13Q86W25 1043 aa13.86□□□□□ -0.19
LYSMD1-201ENST00000368908 PLCH2O75038 1416 aa13.86□□□□□ -0.19
LYSMD1-201ENST00000368908 CAMSAP2Q08AD1 1489 aa13.85□□□□□ -0.19
LYSMD1-201ENST00000368908 NFKBIBQ15653 356 aa13.85□□□□□ -0.19
LYSMD1-201ENST00000368908 CDC42BPAQ5VT25 1732 aa13.85□□□□□ -0.19
LYSMD1-201ENST00000368908 POLR3GLQ9BT43 218 aa13.85□□□□□ -0.19
LYSMD1-201ENST00000368908 BRPF3Q9ULD4 1205 aa13.84□□□□□ -0.19
LYSMD1-201ENST00000368908 CDC42BPBQ9Y5S2 1711 aa13.83□□□□□ -0.2
LYSMD1-201ENST00000368908 VIRMAQ69YN4 1812 aaKnown RBP13.82□□□□□ -0.2
LYSMD1-201ENST00000368908 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.82□□□□□ -0.2
LYSMD1-201ENST00000368908 LAMC1P11047 1609 aa13.82□□□□□ -0.2
LYSMD1-201ENST00000368908 KDM2BQ8NHM5 1336 aa13.81□□□□□ -0.2
LYSMD1-201ENST00000368908 GPATCH8Q9UKJ3 1502 aaKnown RBP13.81□□□□□ -0.2
LYSMD1-201ENST00000368908 CNGB1Q14028 1251 aaPredicted RBP13.81□□□□□ -0.2
LYSMD1-201ENST00000368908 CARD11Q9BXL7 1154 aa13.81□□□□□ -0.2
LYSMD1-201ENST00000368908 FANCAO15360 1455 aa13.8□□□□□ -0.2
LYSMD1-201ENST00000368908 SLC24A1O60721 1099 aa13.8□□□□□ -0.2
LYSMD1-201ENST00000368908 TRPM1Q7Z4N2 1603 aa13.8□□□□□ -0.2
LYSMD1-201ENST00000368908 FRAT1Q92837 279 aaPredicted RBP13.8□□□□□ -0.2
LYSMD1-201ENST00000368908 ARHGAP5Q13017 1502 aa13.8□□□□□ -0.2
LYSMD1-201ENST00000368908 SHANK2Q9UPX8 1470 aa13.79□□□□□ -0.2
LYSMD1-201ENST00000368908 PKD2Q13563 968 aa13.79□□□□□ -0.2
LYSMD1-201ENST00000368908 ANKRD30AQ9BXX3 1397 aa13.79□□□□□ -0.2
LYSMD1-201ENST00000368908 ZNF326Q5BKZ1 582 aaKnown RBP13.79□□□□□ -0.2
LYSMD1-201ENST00000368908 CRBNQ96SW2 442 aa13.79□□□□□ -0.2
LYSMD1-201ENST00000368908 ZNF644Q9H582 1327 aaPredicted RBP13.78□□□□□ -0.2
LYSMD1-201ENST00000368908 CENPQQ7L2Z9 268 aaPredicted RBP13.78□□□□□ -0.2
LYSMD1-201ENST00000368908 FAM43AQ8N2R8 423 aa13.78□□□□□ -0.2
LYSMD1-201ENST00000368908 DAXXQ9UER7 740 aaPredicted RBP13.78□□□□□ -0.2
LYSMD1-201ENST00000368908 EFCAB2Q5VUJ9 269 aa13.78□□□□□ -0.2
LYSMD1-201ENST00000368908 SENP3-EIF4A1A0A087X0R7 540 aa13.77□□□□□ -0.21
LYSMD1-201ENST00000368908 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.21
LYSMD1-201ENST00000368908 FAM161AQ3B820 660 aa13.76□□□□□ -0.21
LYSMD1-201ENST00000368908 ANKRD50Q9ULJ7 1429 aa13.76□□□□□ -0.21
LYSMD1-201ENST00000368908 ST20-MTHFSA0A0A6YYL1 179 aa13.76□□□□□ -0.21
LYSMD1-201ENST00000368908 ABCC1P33527 1531 aa13.75□□□□□ -0.21
LYSMD1-201ENST00000368908 COL17A1Q9UMD9 1497 aaPredicted RBP13.75□□□□□ -0.21
LYSMD1-201ENST00000368908 CDCA7LQ96GN5 454 aa13.74□□□□□ -0.21
LYSMD1-201ENST00000368908 ADGRL1O94910 1474 aa13.74□□□□□ -0.21
LYSMD1-201ENST00000368908 SAMD9LQ8IVG5 1584 aa13.74□□□□□ -0.21
LYSMD1-201ENST00000368908 RICTORQ6R327 1708 aa13.74□□□□□ -0.21
LYSMD1-201ENST00000368908 C8orf34Q49A92 452 aa13.73□□□□□ -0.21
LYSMD1-201ENST00000368908 FRMPD1Q5SYB0 1578 aa13.73□□□□□ -0.21
LYSMD1-201ENST00000368908 PER1O15534 1290 aaPredicted RBP13.72□□□□□ -0.21
LYSMD1-201ENST00000368908 GPRASP1Q5JY77 1395 aa13.72□□□□□ -0.21
LYSMD1-201ENST00000368908 PRDM15P57071 1507 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms