RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 RSPH4AQ5TD94 716 aa14.15□□□□□ -0.14
VTA1-201ENST00000367621 NCOA1Q15788 1441 aa14.15□□□□□ -0.14
VTA1-201ENST00000367621 CD109Q6YHK3 1445 aa14.15□□□□□ -0.14
VTA1-201ENST00000367621 SHANK2Q9UPX8 1470 aa14.14□□□□□ -0.15
VTA1-201ENST00000367621 CCER1Q8TC90 406 aaPredicted RBP14.14□□□□□ -0.15
VTA1-201ENST00000367621 MYO5CQ9NQX4 1742 aa14.14□□□□□ -0.15
VTA1-201ENST00000367621 STAG3Q9UJ98 1225 aa14.13□□□□□ -0.15
VTA1-201ENST00000367621 SYCP2Q9BX26 1530 aa14.13□□□□□ -0.15
VTA1-201ENST00000367621 C9orf84Q5VXU9 1444 aa14.13□□□□□ -0.15
VTA1-201ENST00000367621 TRAPPC8Q9Y2L5 1435 aa14.13□□□□□ -0.15
VTA1-201ENST00000367621 GLI2P10070 1586 aa14.13□□□□□ -0.15
VTA1-201ENST00000367621 FANCAO15360 1455 aa14.12□□□□□ -0.15
VTA1-201ENST00000367621 CCDC141Q6ZP82 1450 aa14.12□□□□□ -0.15
VTA1-201ENST00000367621 ABCC1P33527 1531 aa14.12□□□□□ -0.15
VTA1-201ENST00000367621 TSPY4P0CV99 314 aa14.1□□□□□ -0.15
VTA1-201ENST00000367621 TSPY10P0CW01 314 aa14.1□□□□□ -0.15
VTA1-201ENST00000367621 ANKRD30AQ9BXX3 1397 aa14.09□□□□□ -0.15
VTA1-201ENST00000367621 FAM69CQ0P6D2 419 aa14.09□□□□□ -0.15
VTA1-201ENST00000367621 KDM6BO15054 1643 aa14.08□□□□□ -0.15
VTA1-201ENST00000367621 AFAP1Q8N556 730 aa14.08□□□□□ -0.16
VTA1-201ENST00000367621 ZNF579Q8NAF0 562 aaKnown RBP14.08□□□□□ -0.16
VTA1-201ENST00000367621 CREBZFQ9NS37 354 aa14.08□□□□□ -0.16
VTA1-201ENST00000367621 CROCC2H7BZ55 1655 aa14.07□□□□□ -0.16
VTA1-201ENST00000367621 SCAPERQ9BY12 1400 aa14.07□□□□□ -0.16
VTA1-201ENST00000367621 DIP2BQ9P265 1576 aa14.07□□□□□ -0.16
VTA1-201ENST00000367621 MAST1Q9Y2H9 1570 aa14.07□□□□□ -0.16
VTA1-201ENST00000367621 ADGRL1O94910 1474 aa14.06□□□□□ -0.16
VTA1-201ENST00000367621 MAP3K4Q9Y6R4 1608 aa14.05□□□□□ -0.16
VTA1-201ENST00000367621 GCC2Q8IWJ2 1684 aa14.05□□□□□ -0.16
VTA1-201ENST00000367621 NEO1Q92859 1461 aa14.05□□□□□ -0.16
VTA1-201ENST00000367621 ZEB1P37275 1124 aaPredicted RBP14.04□□□□□ -0.16
VTA1-201ENST00000367621 KIF15Q9NS87 1388 aa14.04□□□□□ -0.16
VTA1-201ENST00000367621 CLSPNQ9HAW4 1339 aa14.03□□□□□ -0.16
VTA1-201ENST00000367621 RTEL1-TNFRSF6BF6WH68 1400 aa14.03□□□□□ -0.16
VTA1-201ENST00000367621 ANKRD50Q9ULJ7 1429 aa14.02□□□□□ -0.16
VTA1-201ENST00000367621 SPAG9O60271 1321 aaKnown RBP14.02□□□□□ -0.17
VTA1-201ENST00000367621 ADGBQ8N7X0 1667 aa14.01□□□□□ -0.17
VTA1-201ENST00000367621 DENND4BO75064 1496 aaPredicted RBP14.01□□□□□ -0.17
VTA1-201ENST00000367621 POGZQ7Z3K3 1410 aa14□□□□□ -0.17
VTA1-201ENST00000367621 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
VTA1-201ENST00000367621 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
VTA1-201ENST00000367621 DCBLD2Q96PD2 775 aa13.99□□□□□ -0.17
VTA1-201ENST00000367621 ZFYVE16Q7Z3T8 1539 aa13.99□□□□□ -0.17
VTA1-201ENST00000367621 ACIN1Q9UKV3 1341 aaKnown RBP13.98□□□□□ -0.17
VTA1-201ENST00000367621 PLXNC1O60486 1568 aa13.98□□□□□ -0.17
VTA1-201ENST00000367621 CFAP74Q9C0B2 1584 aa13.98□□□□□ -0.17
VTA1-201ENST00000367621 RAPGEF3O95398 923 aa13.97□□□□□ -0.17
VTA1-201ENST00000367621 TRIM52Q96A61 297 aa13.97□□□□□ -0.17
VTA1-201ENST00000367621 MPHOSPH9Q99550 1183 aa13.97□□□□□ -0.17
VTA1-201ENST00000367621 ZNF518AQ6AHZ1 1483 aa13.97□□□□□ -0.17
VTA1-201ENST00000367621 PPRC1Q5VV67 1664 aaKnown RBP13.96□□□□□ -0.17
VTA1-201ENST00000367621 PZPP20742 1482 aa13.96□□□□□ -0.17
VTA1-201ENST00000367621 KDM5CP41229 1560 aa13.96□□□□□ -0.18
VTA1-201ENST00000367621 INO80Q9ULG1 1556 aaPredicted RBP13.96□□□□□ -0.18
VTA1-201ENST00000367621 MLH3Q9UHC1 1453 aa13.95□□□□□ -0.18
VTA1-201ENST00000367621 ATP7AQ04656 1500 aa13.95□□□□□ -0.18
VTA1-201ENST00000367621 DUOX2Q9NRD8 1548 aa13.95□□□□□ -0.18
VTA1-201ENST00000367621 ERBINQ96RT1 1412 aa13.93□□□□□ -0.18
VTA1-201ENST00000367621 DHX29Q7Z478 1369 aaKnown RBP13.93□□□□□ -0.18
VTA1-201ENST00000367621 TEX14Q8IWB6 1497 aa13.93□□□□□ -0.18
VTA1-201ENST00000367621 SIN3AQ96ST3 1273 aa13.92□□□□□ -0.18
VTA1-201ENST00000367621 COL17A1Q9UMD9 1497 aaPredicted RBP13.92□□□□□ -0.18
VTA1-201ENST00000367621 KIF13AQ9H1H9 1805 aa13.92□□□□□ -0.18
VTA1-201ENST00000367621 KDM5DQ9BY66 1539 aa13.91□□□□□ -0.18
VTA1-201ENST00000367621 NUP155O75694 1391 aa13.91□□□□□ -0.18
VTA1-201ENST00000367621 FRMPD1Q5SYB0 1578 aa13.91□□□□□ -0.18
VTA1-201ENST00000367621 KIDINS220Q9ULH0 1771 aa13.9□□□□□ -0.18
VTA1-201ENST00000367621 MAGI2Q86UL8 1455 aa13.88□□□□□ -0.19
VTA1-201ENST00000367621 ANKRD30BQ9BXX2 1392 aa13.88□□□□□ -0.19
VTA1-201ENST00000367621 PKD2Q13563 968 aa13.87□□□□□ -0.19
VTA1-201ENST00000367621 YEATS2Q9ULM3 1422 aa13.87□□□□□ -0.19
VTA1-201ENST00000367621 UNC13BO14795 1591 aa13.87□□□□□ -0.19
VTA1-201ENST00000367621 RICTORQ6R327 1708 aa13.87□□□□□ -0.19
VTA1-201ENST00000367621 GALR2O43603 387 aaPredicted RBP13.86□□□□□ -0.19
VTA1-201ENST00000367621 HECW2Q9P2P5 1572 aa13.86□□□□□ -0.19
VTA1-201ENST00000367621 A2MP01023 1474 aa13.86□□□□□ -0.19
VTA1-201ENST00000367621 ZMYM4Q5VZL5 1548 aa13.85□□□□□ -0.19
VTA1-201ENST00000367621 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
VTA1-201ENST00000367621 MYT1LQ9UL68 1186 aa13.85□□□□□ -0.19
VTA1-201ENST00000367621 MNX1P50219 401 aaPredicted RBP13.84□□□□□ -0.19
VTA1-201ENST00000367621 FAM135AQ9P2D6 1515 aa13.84□□□□□ -0.19
VTA1-201ENST00000367621 ABCA6Q8N139 1617 aa13.83□□□□□ -0.2
VTA1-201ENST00000367621 KIF3BO15066 747 aa13.83□□□□□ -0.2
VTA1-201ENST00000367621 NEUROD1Q13562 356 aa13.83□□□□□ -0.2
VTA1-201ENST00000367621 DIP2CQ9Y2E4 1556 aa13.83□□□□□ -0.2
VTA1-201ENST00000367621 TSPOAP1O95153 1857 aa13.82□□□□□ -0.2
VTA1-201ENST00000367621 VWDEQ8N2E2 1590 aa13.82□□□□□ -0.2
VTA1-201ENST00000367621 TIMELESSQ9UNS1 1208 aa13.81□□□□□ -0.2
VTA1-201ENST00000367621 MROH1Q8NDA8 1641 aa13.8□□□□□ -0.2
VTA1-201ENST00000367621 PLA2R1Q13018 1463 aa13.8□□□□□ -0.2
VTA1-201ENST00000367621 DEPDC5O75140 1603 aa13.79□□□□□ -0.2
VTA1-201ENST00000367621 IQGAP3Q86VI3 1631 aa13.79□□□□□ -0.2
VTA1-201ENST00000367621 EIF2AK4Q9P2K8 1649 aaKnown RBP13.79□□□□□ -0.2
VTA1-201ENST00000367621 ATP10AO60312 1499 aa13.79□□□□□ -0.2
VTA1-201ENST00000367621 PRDM15P57071 1507 aaPredicted RBP13.78□□□□□ -0.2
VTA1-201ENST00000367621 RPRD2Q5VT52 1461 aaKnown RBP13.76□□□□□ -0.21
VTA1-201ENST00000367621 PPP1R15AO75807 674 aaPredicted RBP13.76□□□□□ -0.21
VTA1-201ENST00000367621 BCORL1Q5H9F3 1711 aa13.76□□□□□ -0.21
VTA1-201ENST00000367621 RNF17Q9BXT8 1623 aaKnown RBP13.75□□□□□ -0.21
VTA1-201ENST00000367621 PHF12Q96QT6 1004 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms