RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 NCOA1Q15788 1441 aa30.87■■■□□ 2.53
SHISA4-201ENST00000362011 RTEL1-TNFRSF6BF6WH68 1400 aa30.86■■■□□ 2.53
SHISA4-201ENST00000362011 RRP7BPQ9NSQ0 103 aa30.85■■■□□ 2.53
SHISA4-201ENST00000362011 SPAG9O60271 1321 aaKnown RBP30.84■■■□□ 2.53
SHISA4-201ENST00000362011 SETD1BQ9UPS6 1966 aaKnown RBP30.84■■■□□ 2.53
SHISA4-201ENST00000362011 STRCQ7RTU9 1775 aa30.84■■■□□ 2.53
SHISA4-201ENST00000362011 UHRF1BP1Q6BDS2 1440 aa30.83■■■□□ 2.53
SHISA4-201ENST00000362011 RAB3GAP2Q9H2M9 1393 aa30.79■■■□□ 2.52
SHISA4-201ENST00000362011 DMRT2Q9Y5R5 561 aa30.79■■■□□ 2.52
SHISA4-201ENST00000362011 C3P01024 1663 aa30.79■■■□□ 2.52
SHISA4-201ENST00000362011 KIF15Q9NS87 1388 aa30.77■■■□□ 2.52
SHISA4-201ENST00000362011 MYT1LQ9UL68 1186 aa30.77■■■□□ 2.52
SHISA4-201ENST00000362011 DUOX2Q9NRD8 1548 aa30.76■■■□□ 2.51
SHISA4-201ENST00000362011 PTPRTO14522 1441 aa30.71■■■□□ 2.51
SHISA4-201ENST00000362011 CNTLNQ9NXG0 1405 aa30.7■■■□□ 2.51
SHISA4-201ENST00000362011 HRCP23327 699 aa30.7■■■□□ 2.5
SHISA4-201ENST00000362011 ANKRD50Q9ULJ7 1429 aa30.69■■■□□ 2.5
SHISA4-201ENST00000362011 EIF2AK4Q9P2K8 1649 aaKnown RBP30.67■■■□□ 2.5
SHISA4-201ENST00000362011 ERBINQ96RT1 1412 aa30.65■■■□□ 2.5
SHISA4-201ENST00000362011 ESF1Q9H501 851 aaKnown RBP30.64■■■□□ 2.5
SHISA4-201ENST00000362011 NPATQ14207 1427 aa30.62■■■□□ 2.49
SHISA4-201ENST00000362011 ACIN1Q9UKV3 1341 aaKnown RBP30.61■■■□□ 2.49
SHISA4-201ENST00000362011 MROH2AA6NES4 1674 aa30.61■■■□□ 2.49
SHISA4-201ENST00000362011 A2MP01023 1474 aa30.6■■■□□ 2.49
SHISA4-201ENST00000362011 UNC13BO14795 1591 aa30.6■■■□□ 2.49
SHISA4-201ENST00000362011 LTBP4Q8N2S1 1624 aa30.57■■■□□ 2.48
SHISA4-201ENST00000362011 DHX29Q7Z478 1369 aaKnown RBP30.56■■■□□ 2.48
SHISA4-201ENST00000362011 DEPDC5O75140 1603 aa30.56■■■□□ 2.48
SHISA4-201ENST00000362011 ZMYM3Q14202 1370 aa30.55■■■□□ 2.48
SHISA4-201ENST00000362011 RNF17Q9BXT8 1623 aaKnown RBP30.51■■■□□ 2.47
SHISA4-201ENST00000362011 KDM5DQ9BY66 1539 aa30.51■■■□□ 2.47
SHISA4-201ENST00000362011 IQSEC2Q5JU85 1478 aa30.5■■■□□ 2.47
SHISA4-201ENST00000362011 TRIM52Q96A61 297 aa30.49■■■□□ 2.47
SHISA4-201ENST00000362011 DHX57Q6P158 1386 aaKnown RBP30.49■■■□□ 2.47
SHISA4-201ENST00000362011 CAMSAP1Q5T5Y3 1602 aa30.47■■■□□ 2.47
SHISA4-201ENST00000362011 IQGAP3Q86VI3 1631 aa30.47■■■□□ 2.47
SHISA4-201ENST00000362011 CCER1Q8TC90 406 aaPredicted RBP30.45■■■□□ 2.46
SHISA4-201ENST00000362011 MROH1Q8NDA8 1641 aa30.43■■■□□ 2.46
SHISA4-201ENST00000362011 PRDM15P57071 1507 aaPredicted RBP30.43■■■□□ 2.46
SHISA4-201ENST00000362011 CLTCQ00610 1675 aaKnown RBP30.43■■■□□ 2.46
SHISA4-201ENST00000362011 PPP6R1Q9UPN7 881 aa30.42■■■□□ 2.46
SHISA4-201ENST00000362011 ZNF142P52746 1687 aaPredicted RBP30.41■■■□□ 2.46
SHISA4-201ENST00000362011 PZPP20742 1482 aa30.41■■■□□ 2.46
SHISA4-201ENST00000362011 PLA2R1Q13018 1463 aa30.4■■■□□ 2.46
SHISA4-201ENST00000362011 KIF3BO15066 747 aa30.4■■■□□ 2.46
SHISA4-201ENST00000362011 CEP152O94986 1710 aa30.39■■■□□ 2.46
SHISA4-201ENST00000362011 NUP155O75694 1391 aa30.38■■■□□ 2.45
SHISA4-201ENST00000362011 MYO3AQ8NEV4 1616 aa30.38■■■□□ 2.45
SHISA4-201ENST00000362011 FAM135AQ9P2D6 1515 aa30.38■■■□□ 2.45
SHISA4-201ENST00000362011 VWDEQ8N2E2 1590 aa30.36■■■□□ 2.45
SHISA4-201ENST00000362011 CEP170BQ9Y4F5 1589 aaPredicted RBP30.35■■■□□ 2.45
SHISA4-201ENST00000362011 DISP3Q9P2K9 1392 aa30.35■■■□□ 2.45
SHISA4-201ENST00000362011 NCKAP5LQ9HCH0 1330 aa30.34■■■□□ 2.45
SHISA4-201ENST00000362011 PKD2Q13563 968 aa30.34■■■□□ 2.45
SHISA4-201ENST00000362011 GGT6Q6P531 493 aa30.34■■■□□ 2.45
SHISA4-201ENST00000362011 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.34■■■□□ 2.45
SHISA4-201ENST00000362011 TET3O43151 1660 aa30.34■■■□□ 2.45
SHISA4-201ENST00000362011 ZC3H13Q5T200 1668 aaKnown RBP30.33■■■□□ 2.45
SHISA4-201ENST00000362011 MPHOSPH9Q99550 1183 aa30.33■■■□□ 2.45
SHISA4-201ENST00000362011 KANK1Q14678 1352 aa30.33■■■□□ 2.45
SHISA4-201ENST00000362011 ILDR2Q71H61 639 aa30.32■■■□□ 2.44
SHISA4-201ENST00000362011 SLC4A1APQ9BWU0 796 aaKnown RBP30.3■■■□□ 2.44
SHISA4-201ENST00000362011 CLSPNQ9HAW4 1339 aa30.28■■■□□ 2.44
SHISA4-201ENST00000362011 ZNF335Q9H4Z2 1342 aaPredicted RBP30.27■■■□□ 2.44
SHISA4-201ENST00000362011 E9PCH4 1651 aa30.27■■■□□ 2.44
SHISA4-201ENST00000362011 LMTK2Q8IWU2 1503 aa30.24■■■□□ 2.43
SHISA4-201ENST00000362011 A2ML1A8K2U0 1454 aa30.24■■■□□ 2.43
SHISA4-201ENST00000362011 SPATA31D1Q6ZQQ2 1576 aa30.22■■■□□ 2.43
SHISA4-201ENST00000362011 ABCC3O15438 1527 aa30.21■■■□□ 2.43
SHISA4-201ENST00000362011 SOCS7O14512 581 aa30.21■■■□□ 2.43
SHISA4-201ENST00000362011 EFCAB6Q5THR3 1501 aa30.19■■■□□ 2.42
SHISA4-201ENST00000362011 SPHKAPQ2M3C7 1700 aa30.19■■■□□ 2.42
SHISA4-201ENST00000362011 CFAP65Q6ZU64 1925 aaKnown RBP30.18■■■□□ 2.42
SHISA4-201ENST00000362011 FOXD1Q16676 465 aa30.13■■■□□ 2.41
SHISA4-201ENST00000362011 TNRQ92752 1358 aa30.11■■■□□ 2.41
SHISA4-201ENST00000362011 WASHC2CQ9Y4E1 1318 aa30.11■■■□□ 2.41
SHISA4-201ENST00000362011 UBAP1LF5GYI3 381 aa30.11■■■□□ 2.41
SHISA4-201ENST00000362011 FBXO31Q5XUX0 539 aaPredicted RBP30.1■■■□□ 2.41
SHISA4-201ENST00000362011 NEURL4Q96JN8 1562 aa30.09■■■□□ 2.41
SHISA4-201ENST00000362011 ANKRD30BQ9BXX2 1392 aa30.09■■■□□ 2.41
SHISA4-201ENST00000362011 RPRD2Q5VT52 1461 aaKnown RBP30.07■■■□□ 2.4
SHISA4-201ENST00000362011 ZEB1P37275 1124 aaPredicted RBP30.06■■■□□ 2.4
SHISA4-201ENST00000362011 POLR1AO95602 1720 aaPredicted RBP30.06■■■□□ 2.4
SHISA4-201ENST00000362011 ARHGAP31Q2M1Z3 1444 aa30.02■■■□□ 2.4
SHISA4-201ENST00000362011 NLRP1Q9C000 1473 aa30.02■■■□□ 2.4
SHISA4-201ENST00000362011 TRPM2O94759 1503 aa30.02■■■□□ 2.4
SHISA4-201ENST00000362011 CPS1P31327 1500 aa30.02■■■□□ 2.4
SHISA4-201ENST00000362011 SIN3AQ96ST3 1273 aa30■■■□□ 2.39
SHISA4-201ENST00000362011 MED14O60244 1454 aa29.99■■■□□ 2.39
SHISA4-201ENST00000362011 KIF1BO60333 1816 aa29.97■■■□□ 2.39
SHISA4-201ENST00000362011 THEMISQ8N1K5 641 aaPredicted RBP29.96■■■□□ 2.39
SHISA4-201ENST00000362011 CLTCL1P53675 1640 aa29.96■■■□□ 2.39
SHISA4-201ENST00000362011 NEUROD1Q13562 356 aa29.96■■■□□ 2.39
SHISA4-201ENST00000362011 ANKLE2Q86XL3 938 aa29.96■■■□□ 2.39
SHISA4-201ENST00000362011 UGGT1Q9NYU2 1555 aa29.94■■■□□ 2.38
SHISA4-201ENST00000362011 CCDC144AA2RUR9 1427 aa29.93■■■□□ 2.38
SHISA4-201ENST00000362011 SYNMO15061 1565 aa29.9■■■□□ 2.38
SHISA4-201ENST00000362011 NPHP4O75161 1426 aaPredicted RBP29.89■■■□□ 2.38
SHISA4-201ENST00000362011 NOS1P29475 1434 aa29.88■■■□□ 2.37
SHISA4-201ENST00000362011 PIK3C2BO00750 1634 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms