RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 GZF1Q9H116 711 aaPredicted RBP14.72□□□□□ -0.05
CNOT4-203ENST00000361528 MIA2Q96PC5 1412 aa14.71□□□□□ -0.05
CNOT4-203ENST00000361528 INSRP06213 1382 aa14.71□□□□□ -0.05
CNOT4-203ENST00000361528 UQCRHLA0A096LP55 91 aa14.71□□□□□ -0.05
CNOT4-203ENST00000361528 UQCRHP07919 91 aa14.71□□□□□ -0.05
CNOT4-203ENST00000361528 SKAP1Q86WV1 359 aa14.71□□□□□ -0.05
CNOT4-203ENST00000361528 TEX2Q8IWB9 1127 aa14.71□□□□□ -0.05
CNOT4-203ENST00000361528 SCAPERQ9BY12 1400 aa14.7□□□□□ -0.06
CNOT4-203ENST00000361528 PTMSP20962 102 aa14.7□□□□□ -0.06
CNOT4-203ENST00000361528 ZNF500O60304 480 aaPredicted RBP14.7□□□□□ -0.06
CNOT4-203ENST00000361528 PRDM10Q9NQV6 1147 aa14.7□□□□□ -0.06
CNOT4-203ENST00000361528 FMN1Q68DA7 1419 aa14.69□□□□□ -0.06
CNOT4-203ENST00000361528 ZMYM4Q5VZL5 1548 aa14.69□□□□□ -0.06
CNOT4-203ENST00000361528 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
CNOT4-203ENST00000361528 BRD2P25440 801 aaKnown RBP14.69□□□□□ -0.06
CNOT4-203ENST00000361528 CHRM1P11229 460 aaPredicted RBP14.69□□□□□ -0.06
CNOT4-203ENST00000361528 ZNF830Q96NB3 372 aaPredicted RBP14.69□□□□□ -0.06
CNOT4-203ENST00000361528 CHMP5Q9NZZ3 219 aa14.69□□□□□ -0.06
CNOT4-203ENST00000361528 R3HCC1Q9Y3T6 440 aaKnown RBP14.69□□□□□ -0.06
CNOT4-203ENST00000361528 NLRP1Q9C000 1473 aa14.67□□□□□ -0.06
CNOT4-203ENST00000361528 AEBP2Q6ZN18 517 aaPredicted RBP14.67□□□□□ -0.06
CNOT4-203ENST00000361528 SKOR2Q2VWA4 1001 aaPredicted RBP14.66□□□□□ -0.06
CNOT4-203ENST00000361528 HECW1Q76N89 1606 aa14.66□□□□□ -0.06
CNOT4-203ENST00000361528 PLEKHH2Q8IVE3 1493 aa14.66□□□□□ -0.06
CNOT4-203ENST00000361528 ZMYM3Q14202 1370 aa14.65□□□□□ -0.06
CNOT4-203ENST00000361528 CDK11BP21127 795 aaKnown RBP14.65□□□□□ -0.06
CNOT4-203ENST00000361528 SLC20A2Q08357 652 aa14.65□□□□□ -0.06
CNOT4-203ENST00000361528 SASS6Q6UVJ0 657 aa14.65□□□□□ -0.06
CNOT4-203ENST00000361528 MCM5P33992 734 aa14.65□□□□□ -0.06
CNOT4-203ENST00000361528 UPF2Q9HAU5 1272 aaKnown RBP14.64□□□□□ -0.07
CNOT4-203ENST00000361528 MAPK8IP3Q9UPT6 1336 aa14.63□□□□□ -0.07
CNOT4-203ENST00000361528 NAIPQ13075 1403 aa14.63□□□□□ -0.07
CNOT4-203ENST00000361528 NOL7Q9UMY1 257 aaKnown RBP14.63□□□□□ -0.07
CNOT4-203ENST00000361528 MYBBP1AQ9BQG0 1328 aaKnown RBP14.63□□□□□ -0.07
CNOT4-203ENST00000361528 BIVM-ERCC5R4GMW8 1640 aa14.63□□□□□ -0.07
CNOT4-203ENST00000361528 TBC1D2Q9BYX2 928 aa14.62□□□□□ -0.07
CNOT4-203ENST00000361528 KIF15Q9NS87 1388 aa14.62□□□□□ -0.07
CNOT4-203ENST00000361528 RALBP1Q15311 655 aa14.62□□□□□ -0.07
CNOT4-203ENST00000361528 IBTKQ9P2D0 1353 aaPredicted RBP14.62□□□□□ -0.07
CNOT4-203ENST00000361528 PLIN1O60240 522 aa14.61□□□□□ -0.07
CNOT4-203ENST00000361528 ZFP91Q96JP5 570 aaPredicted RBP14.61□□□□□ -0.07
CNOT4-203ENST00000361528 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
CNOT4-203ENST00000361528 AQRO60306 1485 aaKnown RBP eCLIP14.6□□□□□ -0.072e-7■■■■□ 23.2
CNOT4-203ENST00000361528 NASPP49321 788 aaPredicted RBP14.6□□□□□ -0.07
CNOT4-203ENST00000361528 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.6□□□□□ -0.07
CNOT4-203ENST00000361528 TBC1D32Q96NH3 1257 aa14.6□□□□□ -0.07
CNOT4-203ENST00000361528 FGD6Q6ZV73 1430 aa14.59□□□□□ -0.07
CNOT4-203ENST00000361528 DNTTIP2Q5QJE6 756 aaKnown RBP14.58□□□□□ -0.07
CNOT4-203ENST00000361528 CUX1P39880 1505 aa14.58□□□□□ -0.08
CNOT4-203ENST00000361528 GAS2L3Q86XJ1 694 aa14.58□□□□□ -0.08
CNOT4-203ENST00000361528 L3MBTL2Q969R5 705 aa14.58□□□□□ -0.08
CNOT4-203ENST00000361528 CTTNBP2Q8WZ74 1663 aa14.58□□□□□ -0.08
CNOT4-203ENST00000361528 EIF3AQ14152 1382 aaKnown RBP14.58□□□□□ -0.08
CNOT4-203ENST00000361528 VGLL3A8MV65 326 aa14.57□□□□□ -0.08
CNOT4-203ENST00000361528 PLCD3Q8N3E9 789 aa14.57□□□□□ -0.08
CNOT4-203ENST00000361528 IRX3P78415 501 aaPredicted RBP14.56□□□□□ -0.08
CNOT4-203ENST00000361528 DNAJC2Q99543 621 aaKnown RBP14.56□□□□□ -0.08
CNOT4-203ENST00000361528 GBP4Q96PP9 640 aa14.55□□□□□ -0.08
CNOT4-203ENST00000361528 BLMP54132 1417 aaPredicted RBP14.54□□□□□ -0.08
CNOT4-203ENST00000361528 DENND4BO75064 1496 aaPredicted RBP14.53□□□□□ -0.08
CNOT4-203ENST00000361528 TEX14Q8IWB6 1497 aa14.53□□□□□ -0.08
CNOT4-203ENST00000361528 RBM25P49756 843 aaKnown RBP14.53□□□□□ -0.08
CNOT4-203ENST00000361528 FOXD1Q16676 465 aa14.53□□□□□ -0.08
CNOT4-203ENST00000361528 C20orf194Q5TEA3 1177 aa14.53□□□□□ -0.08
CNOT4-203ENST00000361528 MYRIPQ8NFW9 859 aa14.53□□□□□ -0.08
CNOT4-203ENST00000361528 CIZ1Q9ULV3 898 aaPredicted RBP14.53□□□□□ -0.08
CNOT4-203ENST00000361528 ZKSCAN5Q9Y2L8 839 aa14.53□□□□□ -0.08
CNOT4-203ENST00000361528 RPRD2Q5VT52 1461 aaKnown RBP14.52□□□□□ -0.08
CNOT4-203ENST00000361528 SEC24BO95487 1268 aa14.52□□□□□ -0.08
CNOT4-203ENST00000361528 GTF2F1P35269 517 aaKnown RBP eCLIP14.52□□□□□ -0.08
CNOT4-203ENST00000361528 CDCA7LQ96GN5 454 aa14.52□□□□□ -0.08
CNOT4-203ENST00000361528 PDLIM2Q96JY6 352 aa14.52□□□□□ -0.08
CNOT4-203ENST00000361528 PRIMPOLQ96LW4 560 aa14.52□□□□□ -0.08
CNOT4-203ENST00000361528 PTPRKQ15262 1439 aa14.52□□□□□ -0.09
CNOT4-203ENST00000361528 KIF27Q86VH2 1401 aa14.52□□□□□ -0.09
CNOT4-203ENST00000361528 HMGN5P82970 282 aaKnown RBP14.51□□□□□ -0.09
CNOT4-203ENST00000361528 RGS22Q8NE09 1264 aa14.51□□□□□ -0.09
CNOT4-203ENST00000361528 NCOA3Q9Y6Q9 1424 aa14.51□□□□□ -0.09
CNOT4-203ENST00000361528 CC2D2AQ9P2K1 1620 aa14.51□□□□□ -0.09
CNOT4-203ENST00000361528 GCC2Q8IWJ2 1684 aa14.51□□□□□ -0.09
CNOT4-203ENST00000361528 NBPF1Q3BBV0 1214 aa14.51□□□□□ -0.09
CNOT4-203ENST00000361528 NLRP13Q86W25 1043 aa14.51□□□□□ -0.09
CNOT4-203ENST00000361528 ARID3AQ99856 593 aa14.51□□□□□ -0.09
CNOT4-203ENST00000361528 NINLQ9Y2I6 1382 aa14.51□□□□□ -0.09
CNOT4-203ENST00000361528 SECISBP2LQ93073 1101 aaKnown RBP14.5□□□□□ -0.09
CNOT4-203ENST00000361528 FYCO1Q9BQS8 1478 aa14.5□□□□□ -0.09
CNOT4-203ENST00000361528 CBX1P83916 185 aa14.5□□□□□ -0.09
CNOT4-203ENST00000361528 XPCQ01831 940 aaPredicted RBP14.5□□□□□ -0.09
CNOT4-203ENST00000361528 NBPF8Q3BBV2 869 aa14.5□□□□□ -0.09
CNOT4-203ENST00000361528 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.5□□□□□ -0.09
CNOT4-203ENST00000361528 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
CNOT4-203ENST00000361528 CGNQ9P2M7 1197 aaKnown RBP14.49□□□□□ -0.09
CNOT4-203ENST00000361528 PCF11O94913 1555 aaKnown RBP14.49□□□□□ -0.09
CNOT4-203ENST00000361528 BCORL1Q5H9F3 1711 aa14.49□□□□□ -0.09
CNOT4-203ENST00000361528 THOC2Q8NI27 1593 aaKnown RBP14.49□□□□□ -0.09
CNOT4-203ENST00000361528 HSP90AB1P08238 724 aaKnown RBP14.49□□□□□ -0.09
CNOT4-203ENST00000361528 DDIT3P35638 169 aa14.49□□□□□ -0.09
CNOT4-203ENST00000361528 SENP3-EIF4A1A0A087X0R7 540 aa14.48□□□□□ -0.09
CNOT4-203ENST00000361528 IRX5P78411 483 aaPredicted RBP14.47□□□□□ -0.09
CNOT4-203ENST00000361528 TSPYL1Q9H0U9 437 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms