RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 ARHGAP5Q13017 1502 aa15.46■□□□□ 0.07
DNMT1-202ENST00000359526 CHAF1AQ13111 956 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-202ENST00000359526 LRRC9Q6ZRR7 1453 aa15.46■□□□□ 0.07
DNMT1-202ENST00000359526 OS9Q13438 667 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-202ENST00000359526 GBP4Q96PP9 640 aa15.46■□□□□ 0.06
DNMT1-202ENST00000359526 WDR97A6NE52 1622 aa15.45■□□□□ 0.06
DNMT1-202ENST00000359526 TPRNQ4KMQ1 711 aa15.45■□□□□ 0.06
DNMT1-202ENST00000359526 BIVM-ERCC5R4GMW8 1640 aa15.45■□□□□ 0.06
DNMT1-202ENST00000359526 FAM69CQ0P6D2 419 aa15.44■□□□□ 0.06
DNMT1-202ENST00000359526 SENP3Q9H4L4 574 aaPredicted RBP15.44■□□□□ 0.06
DNMT1-202ENST00000359526 PMFBP1Q8TBY8 1022 aa15.44■□□□□ 0.06
DNMT1-202ENST00000359526 IPO9Q96P70 1041 aaKnown RBP15.44■□□□□ 0.06
DNMT1-202ENST00000359526 TROQ12816 1431 aaPredicted RBP15.44■□□□□ 0.06
DNMT1-202ENST00000359526 GOLGA6L4A6NEF3 574 aa15.43■□□□□ 0.06
DNMT1-202ENST00000359526 KCNJ4P48050 445 aa15.43■□□□□ 0.06
DNMT1-202ENST00000359526 FGD1P98174 961 aa15.42■□□□□ 0.06
DNMT1-202ENST00000359526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.42■□□□□ 0.069e-8■□□□□ 9.9
DNMT1-202ENST00000359526 LMOD3Q0VAK6 560 aa15.41■□□□□ 0.06
DNMT1-202ENST00000359526 SCAPERQ9BY12 1400 aa15.41■□□□□ 0.06
DNMT1-202ENST00000359526 AMER1Q5JTC6 1135 aaPredicted RBP15.41■□□□□ 0.06
DNMT1-202ENST00000359526 RSPH6AQ9H0K4 717 aa15.4■□□□□ 0.06
DNMT1-202ENST00000359526 NCOA2Q15596 1464 aa15.4■□□□□ 0.06
DNMT1-202ENST00000359526 MAP3K1Q13233 1512 aa15.4■□□□□ 0.06
DNMT1-202ENST00000359526 RUSC2Q8N2Y8 1516 aa15.4■□□□□ 0.06
DNMT1-202ENST00000359526 NLRP13Q86W25 1043 aa15.39■□□□□ 0.05
DNMT1-202ENST00000359526 RRBP1Q9P2E9 1410 aaKnown RBP15.39■□□□□ 0.05
DNMT1-202ENST00000359526 HFM1A2PYH4 1435 aa15.39■□□□□ 0.05
DNMT1-202ENST00000359526 A0A0G2JS52 829 aa15.39■□□□□ 0.05
DNMT1-202ENST00000359526 RTF1Q92541 710 aaKnown RBP15.38■□□□□ 0.05
DNMT1-202ENST00000359526 SUPT6HQ7KZ85 1726 aaKnown RBP15.38■□□□□ 0.05
DNMT1-202ENST00000359526 GRIN2AQ12879 1464 aa15.38■□□□□ 0.05
DNMT1-202ENST00000359526 LMOD2Q6P5Q4 547 aa15.38■□□□□ 0.05
DNMT1-202ENST00000359526 VSIG10Q8N0Z9 540 aa15.37■□□□□ 0.05
DNMT1-202ENST00000359526 NGEFQ8N5V2 710 aa15.37■□□□□ 0.05
DNMT1-202ENST00000359526 KIF15Q9NS87 1388 aa15.37■□□□□ 0.05
DNMT1-202ENST00000359526 DHX57Q6P158 1386 aaKnown RBP15.37■□□□□ 0.05
DNMT1-202ENST00000359526 GOLGA2Q08379 1002 aa15.37■□□□□ 0.05
DNMT1-202ENST00000359526 HSP90AA2PQ14568 343 aaPredicted RBP15.36■□□□□ 0.05
DNMT1-202ENST00000359526 EVC2Q86UK5 1308 aa15.36■□□□□ 0.05
DNMT1-202ENST00000359526 SPRYD3Q8NCJ5 442 aa15.36■□□□□ 0.05
DNMT1-202ENST00000359526 L3MBTL2Q969R5 705 aa15.36■□□□□ 0.05
DNMT1-202ENST00000359526 USP35Q9P2H5 1018 aa15.36■□□□□ 0.05
DNMT1-202ENST00000359526 FOXD1Q16676 465 aa15.35■□□□□ 0.05
DNMT1-202ENST00000359526 PPP6R1Q9UPN7 881 aa15.34■□□□□ 0.05
DNMT1-202ENST00000359526 SYAP1Q96A49 352 aaPredicted RBP15.34■□□□□ 0.05
DNMT1-202ENST00000359526 HMGB2P26583 209 aaKnown RBP15.33■□□□□ 0.05
DNMT1-202ENST00000359526 PLEKHG5O94827 1062 aa15.33■□□□□ 0.04
DNMT1-202ENST00000359526 THOC2Q8NI27 1593 aaKnown RBP15.33■□□□□ 0.04
DNMT1-202ENST00000359526 ANKRD50Q9ULJ7 1429 aa15.33■□□□□ 0.04
DNMT1-202ENST00000359526 GZF1Q9H116 711 aaPredicted RBP15.32■□□□□ 0.04
DNMT1-202ENST00000359526 U2AF1L5P0DN76 240 aaPredicted RBP15.32■□□□□ 0.04
DNMT1-202ENST00000359526 U2AF1Q01081 240 aaKnown RBP eCLIP15.32■□□□□ 0.047e-7■□□□□ 10.4
DNMT1-202ENST00000359526 ITPRIPQ8IWB1 547 aa15.32■□□□□ 0.04
DNMT1-202ENST00000359526 KIAA1211Q6ZU35 1233 aa15.32■□□□□ 0.04
DNMT1-202ENST00000359526 MYBBP1AQ9BQG0 1328 aaKnown RBP15.31■□□□□ 0.04
DNMT1-202ENST00000359526 GOLGA6L3A6NEY3 463 aa15.31■□□□□ 0.04
DNMT1-202ENST00000359526 SLKQ9H2G2 1235 aaPredicted RBP15.31■□□□□ 0.04
DNMT1-202ENST00000359526 KIF14Q15058 1648 aa15.31■□□□□ 0.04
DNMT1-202ENST00000359526 HTATSF1O43719 755 aaKnown RBP15.3■□□□□ 0.04
DNMT1-202ENST00000359526 KIAA2012Q0VF49 1180 aa15.3■□□□□ 0.04
DNMT1-202ENST00000359526 ARID3AQ99856 593 aa15.3■□□□□ 0.04
DNMT1-202ENST00000359526 RPGRIP1LQ68CZ1 1315 aa15.3■□□□□ 0.04
DNMT1-202ENST00000359526 CGNL1Q0VF96 1302 aa15.29■□□□□ 0.04
DNMT1-202ENST00000359526 DRC7Q8IY82 874 aa15.29■□□□□ 0.04
DNMT1-202ENST00000359526 PLB1Q6P1J6 1458 aa15.28■□□□□ 0.04
DNMT1-202ENST00000359526 CENPJQ9HC77 1338 aaPredicted RBP15.28■□□□□ 0.04
DNMT1-202ENST00000359526 NAP1L2Q9ULW6 460 aaPredicted RBP15.28■□□□□ 0.04
DNMT1-202ENST00000359526 TIAM1Q13009 1591 aa15.28■□□□□ 0.04
DNMT1-202ENST00000359526 ZBED9Q6R2W3 1325 aa15.28■□□□□ 0.04
DNMT1-202ENST00000359526 PRKCSHP14314 528 aaPredicted RBP15.28■□□□□ 0.04
DNMT1-202ENST00000359526 ROCK1Q13464 1354 aa15.27■□□□□ 0.04
DNMT1-202ENST00000359526 NGDNQ8NEJ9 315 aaKnown RBP15.27■□□□□ 0.03
DNMT1-202ENST00000359526 FANCIQ9NVI1 1328 aa15.27■□□□□ 0.03
DNMT1-202ENST00000359526 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.03
DNMT1-202ENST00000359526 CENPQQ7L2Z9 268 aaPredicted RBP15.27■□□□□ 0.03
DNMT1-202ENST00000359526 AEBP2Q6ZN18 517 aaPredicted RBP15.26■□□□□ 0.03
DNMT1-202ENST00000359526 HMMRO75330 724 aa15.26■□□□□ 0.03
DNMT1-202ENST00000359526 STK26Q9P289 416 aa15.26■□□□□ 0.03
DNMT1-202ENST00000359526 TEX14Q8IWB6 1497 aa15.25■□□□□ 0.03
DNMT1-202ENST00000359526 NPHP1O15259 732 aa15.25■□□□□ 0.03
DNMT1-202ENST00000359526 SMC4Q9NTJ3 1288 aa15.25■□□□□ 0.03
DNMT1-202ENST00000359526 CSB-PGBD3P0DP91 1061 aa15.25■□□□□ 0.03
DNMT1-202ENST00000359526 SLC52A1Q9NWF4 448 aa15.25■□□□□ 0.03
DNMT1-202ENST00000359526 CSPP1Q1MSJ5 1256 aa15.24■□□□□ 0.03
DNMT1-202ENST00000359526 C9orf84Q5VXU9 1444 aa15.24■□□□□ 0.03
DNMT1-202ENST00000359526 TMX4Q9H1E5 349 aaPredicted RBP15.24■□□□□ 0.03
DNMT1-202ENST00000359526 MFAP1P55081 439 aaKnown RBP15.23■□□□□ 0.03
DNMT1-202ENST00000359526 PRKRIP1Q9H875 184 aaPredicted RBP15.23■□□□□ 0.03
DNMT1-202ENST00000359526 ARAP1Q96P48 1450 aa15.23■□□□□ 0.03
DNMT1-202ENST00000359526 EPRSP07814 1512 aaKnown RBP15.22■□□□□ 0.03
DNMT1-202ENST00000359526 DAPK1P53355 1430 aa15.22■□□□□ 0.03
DNMT1-202ENST00000359526 SAFB2Q14151 953 aaKnown RBP eCLIP15.22■□□□□ 0.03
DNMT1-202ENST00000359526 DDX11L8A8MPP1 907 aa15.22■□□□□ 0.03
DNMT1-202ENST00000359526 FAM161AQ3B820 660 aa15.21■□□□□ 0.03
DNMT1-202ENST00000359526 THEMISQ8N1K5 641 aaPredicted RBP15.21■□□□□ 0.03
DNMT1-202ENST00000359526 STK31Q9BXU1 1019 aa15.21■□□□□ 0.03
DNMT1-202ENST00000359526 CCDC141Q6ZP82 1450 aa15.21■□□□□ 0.03
DNMT1-202ENST00000359526 GSE1Q14687 1217 aa15.2■□□□□ 0.02
DNMT1-202ENST00000359526 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
DNMT1-202ENST00000359526 GPATCH3Q96I76 525 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms