RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 FANCIQ9NVI1 1328 aa27.56■■■□□ 2
COL13A1-202ENST00000357811 CCDC144AA2RUR9 1427 aa27.53■■■□□ 2
COL13A1-202ENST00000357811 ARID4BQ4LE39 1312 aaPredicted RBP27.53■■■□□ 2
COL13A1-202ENST00000357811 SHANK2Q9UPX8 1470 aa27.53■■■□□ 2
COL13A1-202ENST00000357811 MYBBP1AQ9BQG0 1328 aaKnown RBP27.51■■□□□ 1.99
COL13A1-202ENST00000357811 CCDC141Q6ZP82 1450 aa27.5■■□□□ 1.99
COL13A1-202ENST00000357811 FAM135AQ9P2D6 1515 aa27.49■■□□□ 1.99
COL13A1-202ENST00000357811 SAMD9LQ8IVG5 1584 aa27.48■■□□□ 1.99
COL13A1-202ENST00000357811 SYCP2Q9BX26 1530 aa27.46■■□□□ 1.99
COL13A1-202ENST00000357811 ARHGAP5Q13017 1502 aa27.45■■□□□ 1.99
COL13A1-202ENST00000357811 RALBP1Q15311 655 aa27.45■■□□□ 1.98
COL13A1-202ENST00000357811 ARHGEF12Q9NZN5 1544 aa27.44■■□□□ 1.98
COL13A1-202ENST00000357811 CDCA7LQ96GN5 454 aa27.43■■□□□ 1.98
COL13A1-202ENST00000357811 PLEKHH2Q8IVE3 1493 aa27.43■■□□□ 1.98
COL13A1-202ENST00000357811 PRAG1Q86YV5 1406 aa27.41■■□□□ 1.98
COL13A1-202ENST00000357811 PANK3Q9H999 370 aa27.41■■□□□ 1.98
COL13A1-202ENST00000357811 CDC42BPBQ9Y5S2 1711 aa27.41■■□□□ 1.98
COL13A1-202ENST00000357811 KTN1Q86UP2 1357 aaKnown RBP27.4■■□□□ 1.98
COL13A1-202ENST00000357811 DISP3Q9P2K9 1392 aa27.4■■□□□ 1.98
COL13A1-202ENST00000357811 PLA2R1Q13018 1463 aa27.4■■□□□ 1.98
COL13A1-202ENST00000357811 BRD4O60885 1362 aaPredicted RBP27.39■■□□□ 1.98
COL13A1-202ENST00000357811 NLRP13Q86W25 1043 aa27.39■■□□□ 1.98
COL13A1-202ENST00000357811 EXOC6Q8TAG9 804 aa27.39■■□□□ 1.98
COL13A1-202ENST00000357811 KDM5DQ9BY66 1539 aa27.38■■□□□ 1.97
COL13A1-202ENST00000357811 RSPH4AQ5TD94 716 aa27.37■■□□□ 1.97
COL13A1-202ENST00000357811 RNF123Q5XPI4 1314 aa27.37■■□□□ 1.97
COL13A1-202ENST00000357811 LRPPRCP42704 1394 aaKnown RBP27.36■■□□□ 1.97
COL13A1-202ENST00000357811 PER1O15534 1290 aaPredicted RBP27.36■■□□□ 1.97
COL13A1-202ENST00000357811 ARHGEF5Q12774 1597 aa27.36■■□□□ 1.97
COL13A1-202ENST00000357811 TTC37Q6PGP7 1564 aa27.36■■□□□ 1.97
COL13A1-202ENST00000357811 PLIN1O60240 522 aa27.35■■□□□ 1.97
COL13A1-202ENST00000357811 A2MP01023 1474 aa27.34■■□□□ 1.97
COL13A1-202ENST00000357811 TESK2Q96S53 571 aa27.34■■□□□ 1.97
COL13A1-202ENST00000357811 RCAN3Q9UKA8 241 aa27.34■■□□□ 1.97
COL13A1-202ENST00000357811 ERCC6L2Q5T890 1561 aa27.34■■□□□ 1.97
COL13A1-202ENST00000357811 PAK3O75914 559 aaPredicted RBP27.33■■□□□ 1.96
COL13A1-202ENST00000357811 RRP1P56182 461 aaKnown RBP27.32■■□□□ 1.96
COL13A1-202ENST00000357811 MYT1LQ9UL68 1186 aa27.31■■□□□ 1.96
COL13A1-202ENST00000357811 PREX2Q70Z35 1606 aa27.3■■□□□ 1.96
COL13A1-202ENST00000357811 NBR1Q14596 966 aa27.3■■□□□ 1.96
COL13A1-202ENST00000357811 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.3■■□□□ 1.96
COL13A1-202ENST00000357811 AFAP1Q8N556 730 aa27.29■■□□□ 1.96
COL13A1-202ENST00000357811 PARD3Q8TEW0 1356 aa27.27■■□□□ 1.96
COL13A1-202ENST00000357811 NPM2Q86SE8 214 aaKnown RBP27.27■■□□□ 1.96
COL13A1-202ENST00000357811 TMF1P82094 1093 aa27.27■■□□□ 1.96
COL13A1-202ENST00000357811 SKAP1Q86WV1 359 aa27.26■■□□□ 1.95
COL13A1-202ENST00000357811 TRPM1Q7Z4N2 1603 aa27.24■■□□□ 1.95
COL13A1-202ENST00000357811 NOP58Q9Y2X3 529 aaKnown RBP27.22■■□□□ 1.95
COL13A1-202ENST00000357811 ERBINQ96RT1 1412 aa27.22■■□□□ 1.95
COL13A1-202ENST00000357811 EFCAB2Q5VUJ9 269 aa27.22■■□□□ 1.95
COL13A1-202ENST00000357811 CHD1O14646 1710 aa27.21■■□□□ 1.95
COL13A1-202ENST00000357811 TRAPPC8Q9Y2L5 1435 aa27.18■■□□□ 1.94
COL13A1-202ENST00000357811 ADAMTS8Q9UP79 889 aa27.18■■□□□ 1.94
COL13A1-202ENST00000357811 ANP32AP39687 249 aaKnown RBP27.17■■□□□ 1.94
COL13A1-202ENST00000357811 COL17A1Q9UMD9 1497 aaPredicted RBP27.17■■□□□ 1.94
COL13A1-202ENST00000357811 GPRASP1Q5JY77 1395 aa27.16■■□□□ 1.94
COL13A1-202ENST00000357811 E9PCH4 1651 aa27.16■■□□□ 1.94
COL13A1-202ENST00000357811 SPAG9O60271 1321 aaKnown RBP27.14■■□□□ 1.94
COL13A1-202ENST00000357811 KNSTRNQ9Y448 316 aa27.14■■□□□ 1.94
COL13A1-202ENST00000357811 UNC13BO14795 1591 aa27.1■■□□□ 1.93
COL13A1-202ENST00000357811 CRBNQ96SW2 442 aa27.1■■□□□ 1.93
COL13A1-202ENST00000357811 C20orf194Q5TEA3 1177 aa27.09■■□□□ 1.93
COL13A1-202ENST00000357811 ABCC2Q92887 1545 aa27.09■■□□□ 1.93
COL13A1-202ENST00000357811 PDE3BQ13370 1112 aa27.08■■□□□ 1.93
COL13A1-202ENST00000357811 MYO5CQ9NQX4 1742 aa27.08■■□□□ 1.93
COL13A1-202ENST00000357811 PRDM15P57071 1507 aaPredicted RBP27.07■■□□□ 1.92
COL13A1-202ENST00000357811 DUOX2Q9NRD8 1548 aa27.07■■□□□ 1.92
COL13A1-202ENST00000357811 PLCH2O75038 1416 aa27.07■■□□□ 1.92
COL13A1-202ENST00000357811 CCDC146Q8IYE0 955 aa27.07■■□□□ 1.92
COL13A1-202ENST00000357811 KIF3BO15066 747 aa27.06■■□□□ 1.92
COL13A1-202ENST00000357811 WDR43Q15061 677 aaKnown RBP eCLIP27.06■■□□□ 1.92
COL13A1-202ENST00000357811 IPO9Q96P70 1041 aaKnown RBP27.06■■□□□ 1.92
COL13A1-202ENST00000357811 PPP2R1AP30153 589 aa27.06■■□□□ 1.92
COL13A1-202ENST00000357811 IQGAP3Q86VI3 1631 aa27.05■■□□□ 1.92
COL13A1-202ENST00000357811 ZBTB47Q9UFB7 747 aaPredicted RBP27.05■■□□□ 1.92
COL13A1-202ENST00000357811 MAGI2Q86UL8 1455 aa27.04■■□□□ 1.92
COL13A1-202ENST00000357811 PRKCSHP14314 528 aaPredicted RBP27.03■■□□□ 1.92
COL13A1-202ENST00000357811 MAST1Q9Y2H9 1570 aa27.03■■□□□ 1.92
COL13A1-202ENST00000357811 WASHC2CQ9Y4E1 1318 aa27.01■■□□□ 1.91
COL13A1-202ENST00000357811 CFAP70Q5T0N1 1121 aa27■■□□□ 1.91
COL13A1-202ENST00000357811 PDE4AP27815 886 aa27■■□□□ 1.91
COL13A1-202ENST00000357811 PLXNC1O60486 1568 aa26.99■■□□□ 1.91
COL13A1-202ENST00000357811 CHGAP10645 457 aaKnown RBP26.99■■□□□ 1.91
COL13A1-202ENST00000357811 AMER1Q5JTC6 1135 aaPredicted RBP26.99■■□□□ 1.91
COL13A1-202ENST00000357811 SENP3Q9H4L4 574 aaPredicted RBP26.98■■□□□ 1.91
COL13A1-202ENST00000357811 DEKP35659 375 aaKnown RBP26.98■■□□□ 1.91
COL13A1-202ENST00000357811 PLEKHH1Q9ULM0 1364 aa26.97■■□□□ 1.91
COL13A1-202ENST00000357811 WDR7Q9Y4E6 1490 aa26.95■■□□□ 1.91
COL13A1-202ENST00000357811 BLMP54132 1417 aaPredicted RBP26.95■■□□□ 1.9
COL13A1-202ENST00000357811 ZCCHC11Q5TAX3 1644 aaKnown RBP26.94■■□□□ 1.9
COL13A1-202ENST00000357811 SHROOM2Q13796 1616 aa26.93■■□□□ 1.9
COL13A1-202ENST00000357811 TCERG1O14776 1098 aaKnown RBP26.93■■□□□ 1.9
COL13A1-202ENST00000357811 EIF2AK4Q9P2K8 1649 aaKnown RBP26.93■■□□□ 1.9
COL13A1-202ENST00000357811 ATP10AO60312 1499 aa26.92■■□□□ 1.9
COL13A1-202ENST00000357811 SCAPERQ9BY12 1400 aa26.92■■□□□ 1.9
COL13A1-202ENST00000357811 TNNT2P45379 298 aaPredicted RBP26.91■■□□□ 1.9
COL13A1-202ENST00000357811 LAS1LQ9Y4W2 734 aaKnown RBP26.91■■□□□ 1.9
COL13A1-202ENST00000357811 ABCC1P33527 1531 aa26.91■■□□□ 1.9
COL13A1-202ENST00000357811 ADGRF5Q8IZF2 1346 aa26.9■■□□□ 1.9
COL13A1-202ENST00000357811 APAF1O14727 1248 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms