RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 SAMD9LQ8IVG5 1584 aa24.05■■□□□ 1.44
GYPC-202ENST00000356887 SMG6Q86US8 1419 aaKnown RBP24.05■■□□□ 1.44
GYPC-202ENST00000356887 CCDC141Q6ZP82 1450 aa24.04■■□□□ 1.44
GYPC-202ENST00000356887 CDC42BPBQ9Y5S2 1711 aa24.04■■□□□ 1.44
GYPC-202ENST00000356887 PREX2Q70Z35 1606 aa24.03■■□□□ 1.44
GYPC-202ENST00000356887 RSPH4AQ5TD94 716 aa24.03■■□□□ 1.44
GYPC-202ENST00000356887 KDM2AQ9Y2K7 1162 aa24.01■■□□□ 1.43
GYPC-202ENST00000356887 DCAF11Q8TEB1 546 aa24.01■■□□□ 1.43
GYPC-202ENST00000356887 FAM135AQ9P2D6 1515 aa24■■□□□ 1.43
GYPC-202ENST00000356887 ST20-MTHFSA0A0A6YYL1 179 aa23.99■■□□□ 1.43
GYPC-202ENST00000356887 PNISRQ8TF01 805 aaKnown RBP23.99■■□□□ 1.43
GYPC-202ENST00000356887 CNGB1Q14028 1251 aaPredicted RBP23.98■■□□□ 1.43
GYPC-202ENST00000356887 FANCIQ9NVI1 1328 aa23.98■■□□□ 1.43
GYPC-202ENST00000356887 NUDCQ9Y266 331 aa23.96■■□□□ 1.43
GYPC-202ENST00000356887 TTC37Q6PGP7 1564 aa23.95■■□□□ 1.42
GYPC-202ENST00000356887 B4GALNT3Q6L9W6 998 aa23.95■■□□□ 1.42
GYPC-202ENST00000356887 MAST1Q9Y2H9 1570 aa23.94■■□□□ 1.42
GYPC-202ENST00000356887 RNF123Q5XPI4 1314 aa23.94■■□□□ 1.42
GYPC-202ENST00000356887 MSH5O43196 834 aa23.94■■□□□ 1.42
GYPC-202ENST00000356887 KTN1Q86UP2 1357 aaKnown RBP23.94■■□□□ 1.42
GYPC-202ENST00000356887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.93■■□□□ 1.424e-6■■■□□ 16.3
GYPC-202ENST00000356887 TMC1Q8TDI8 760 aa23.93■■□□□ 1.42
GYPC-202ENST00000356887 E9PCH4 1651 aa23.92■■□□□ 1.42
GYPC-202ENST00000356887 UNC13BO14795 1591 aa23.91■■□□□ 1.42
GYPC-202ENST00000356887 PRAG1Q86YV5 1406 aa23.91■■□□□ 1.42
GYPC-202ENST00000356887 SYCP2Q9BX26 1530 aa23.9■■□□□ 1.42
GYPC-202ENST00000356887 TRPM1Q7Z4N2 1603 aa23.9■■□□□ 1.42
GYPC-202ENST00000356887 RALBP1Q15311 655 aa23.9■■□□□ 1.42
GYPC-202ENST00000356887 BRD4O60885 1362 aaPredicted RBP23.9■■□□□ 1.42
GYPC-202ENST00000356887 WDR7Q9Y4E6 1490 aa23.9■■□□□ 1.42
GYPC-202ENST00000356887 LRPPRCP42704 1394 aaKnown RBP23.9■■□□□ 1.42
GYPC-202ENST00000356887 CCDC144AA2RUR9 1427 aa23.89■■□□□ 1.42
GYPC-202ENST00000356887 CYB5RLQ6IPT4 315 aa23.89■■□□□ 1.41
GYPC-202ENST00000356887 MYBBP1AQ9BQG0 1328 aaKnown RBP23.89■■□□□ 1.41
GYPC-202ENST00000356887 PLA2R1Q13018 1463 aa23.88■■□□□ 1.41
GYPC-202ENST00000356887 MYO5CQ9NQX4 1742 aa23.88■■□□□ 1.41
GYPC-202ENST00000356887 ARHGAP5Q13017 1502 aa23.87■■□□□ 1.41
GYPC-202ENST00000356887 ASXL2Q76L83 1435 aa23.87■■□□□ 1.41
GYPC-202ENST00000356887 NPM1P06748 294 aaKnown RBP eCLIP23.87■■□□□ 1.41
GYPC-202ENST00000356887 PLXNC1O60486 1568 aa23.84■■□□□ 1.41
GYPC-202ENST00000356887 GPRASP1Q5JY77 1395 aa23.83■■□□□ 1.41
GYPC-202ENST00000356887 IQGAP3Q86VI3 1631 aa23.83■■□□□ 1.4
GYPC-202ENST00000356887 PLEKHH2Q8IVE3 1493 aa23.82■■□□□ 1.4
GYPC-202ENST00000356887 A2MP01023 1474 aa23.82■■□□□ 1.4
GYPC-202ENST00000356887 NBPF1Q3BBV0 1214 aa23.8■■□□□ 1.4
GYPC-202ENST00000356887 LAMC1P11047 1609 aa23.8■■□□□ 1.4
GYPC-202ENST00000356887 RGL3Q3MIN7 710 aa23.8■■□□□ 1.4
GYPC-202ENST00000356887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.79■■□□□ 1.4
GYPC-202ENST00000356887 PARD3Q8TEW0 1356 aa23.78■■□□□ 1.4
GYPC-202ENST00000356887 ABCA9Q8IUA7 1624 aa23.77■■□□□ 1.4
GYPC-202ENST00000356887 DUOX2Q9NRD8 1548 aa23.77■■□□□ 1.4
GYPC-202ENST00000356887 DNAJC5Q9H3Z4 198 aa23.77■■□□□ 1.4
GYPC-202ENST00000356887 PRDM15P57071 1507 aaPredicted RBP23.77■■□□□ 1.39
GYPC-202ENST00000356887 ATP10AO60312 1499 aa23.76■■□□□ 1.39
GYPC-202ENST00000356887 SENP3-EIF4A1A0A087X0R7 540 aa23.76■■□□□ 1.39
GYPC-202ENST00000356887 PER1O15534 1290 aaPredicted RBP23.76■■□□□ 1.39
GYPC-202ENST00000356887 MAGI2Q86UL8 1455 aa23.75■■□□□ 1.39
GYPC-202ENST00000356887 NLRP13Q86W25 1043 aa23.74■■□□□ 1.39
GYPC-202ENST00000356887 COL17A1Q9UMD9 1497 aaPredicted RBP23.74■■□□□ 1.39
GYPC-202ENST00000356887 PLCH2O75038 1416 aa23.74■■□□□ 1.39
GYPC-202ENST00000356887 TESK2Q96S53 571 aa23.73■■□□□ 1.39
GYPC-202ENST00000356887 EIF2AK4Q9P2K8 1649 aaKnown RBP23.72■■□□□ 1.39
GYPC-202ENST00000356887 ERBINQ96RT1 1412 aa23.72■■□□□ 1.39
GYPC-202ENST00000356887 CCDC136Q96JN2 1154 aa23.71■■□□□ 1.39
GYPC-202ENST00000356887 WASHC2CQ9Y4E1 1318 aa23.71■■□□□ 1.39
GYPC-202ENST00000356887 DISP3Q9P2K9 1392 aa23.69■■□□□ 1.38
GYPC-202ENST00000356887 ARAP3Q8WWN8 1544 aa23.68■■□□□ 1.38
GYPC-202ENST00000356887 EFCAB2Q5VUJ9 269 aa23.65■■□□□ 1.38
GYPC-202ENST00000356887 PDE3BQ13370 1112 aa23.64■■□□□ 1.38
GYPC-202ENST00000356887 INSRP06213 1382 aa23.63■■□□□ 1.37
GYPC-202ENST00000356887 ABCC1P33527 1531 aa23.63■■□□□ 1.37
GYPC-202ENST00000356887 RRP1P56182 461 aaKnown RBP23.63■■□□□ 1.37
GYPC-202ENST00000356887 RNF17Q9BXT8 1623 aaKnown RBP23.62■■□□□ 1.37
GYPC-202ENST00000356887 TMF1P82094 1093 aa23.62■■□□□ 1.37
GYPC-202ENST00000356887 PANK3Q9H999 370 aa23.62■■□□□ 1.37
GYPC-202ENST00000356887 FANCAO15360 1455 aa23.6■■□□□ 1.37
GYPC-202ENST00000356887 TRAPPC8Q9Y2L5 1435 aa23.6■■□□□ 1.37
GYPC-202ENST00000356887 RCAN3Q9UKA8 241 aa23.6■■□□□ 1.37
GYPC-202ENST00000356887 ZMYM4Q5VZL5 1548 aa23.6■■□□□ 1.37
GYPC-202ENST00000356887 CC2D1BQ5T0F9 858 aaKnown RBP23.58■■□□□ 1.37
GYPC-202ENST00000356887 CD109Q6YHK3 1445 aa23.57■■□□□ 1.36
GYPC-202ENST00000356887 BLMP54132 1417 aaPredicted RBP23.56■■□□□ 1.36
GYPC-202ENST00000356887 SALL2Q9Y467 1007 aaPredicted RBP23.56■■□□□ 1.36
GYPC-202ENST00000356887 RTEL1-TNFRSF6BF6WH68 1400 aa23.54■■□□□ 1.36
GYPC-202ENST00000356887 MADDQ8WXG6 1647 aa23.54■■□□□ 1.36
GYPC-202ENST00000356887 DIP2BQ9P265 1576 aa23.53■■□□□ 1.36
GYPC-202ENST00000356887 MAP3K4Q9Y6R4 1608 aa23.53■■□□□ 1.36
GYPC-202ENST00000356887 EXOC6Q8TAG9 804 aa23.53■■□□□ 1.36
GYPC-202ENST00000356887 GLI2P10070 1586 aa23.52■■□□□ 1.36
GYPC-202ENST00000356887 SPAG9O60271 1321 aaKnown RBP23.52■■□□□ 1.36
GYPC-202ENST00000356887 TRPM2O94759 1503 aa23.51■■□□□ 1.35
GYPC-202ENST00000356887 IQGAP1P46940 1657 aa23.51■■□□□ 1.35
GYPC-202ENST00000356887 CDCA7LQ96GN5 454 aa23.51■■□□□ 1.35
GYPC-202ENST00000356887 CFAP74Q9C0B2 1584 aa23.51■■□□□ 1.35
GYPC-202ENST00000356887 PTPRTO14522 1441 aa23.5■■□□□ 1.35
GYPC-202ENST00000356887 ADGRL1O94910 1474 aa23.5■■□□□ 1.35
GYPC-202ENST00000356887 STAC3Q96MF2 364 aa23.49■■□□□ 1.35
GYPC-202ENST00000356887 ZFYVE16Q7Z3T8 1539 aa23.48■■□□□ 1.35
GYPC-202ENST00000356887 CEP152O94986 1710 aa23.48■■□□□ 1.35
GYPC-202ENST00000356887 SPHKAPQ2M3C7 1700 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms