RNA–Protein interactions for RNA: ENST00000356020.2

LINC01565-201, Transcript of long intergenic non-protein coding RNA 1565, humanhuman

TSL 2 BASIC

Gene LINC01565, Length 2,697 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01565-201ENST00000356020 HNRNPMP52272 730 aaKnown RBP eCLIP21.12■□□□□ 0.97
LINC01565-201ENST00000356020 KTN1Q86UP2 1357 aaKnown RBP21.12■□□□□ 0.97
LINC01565-201ENST00000356020 PNISRQ8TF01 805 aaKnown RBP21.11■□□□□ 0.97
LINC01565-201ENST00000356020 TRPM1Q7Z4N2 1603 aa21.11■□□□□ 0.97
LINC01565-201ENST00000356020 CNGB1Q14028 1251 aaPredicted RBP21.11■□□□□ 0.97
LINC01565-201ENST00000356020 MAST1Q9Y2H9 1570 aa21.1■□□□□ 0.97
LINC01565-201ENST00000356020 UNC13BO14795 1591 aa21.09■□□□□ 0.97
LINC01565-201ENST00000356020 ST20-MTHFSA0A0A6YYL1 179 aa21.09■□□□□ 0.97
LINC01565-201ENST00000356020 TMC1Q8TDI8 760 aa21.08■□□□□ 0.97
LINC01565-201ENST00000356020 DCAF11Q8TEB1 546 aa21.08■□□□□ 0.97
LINC01565-201ENST00000356020 KDM2AQ9Y2K7 1162 aa21.08■□□□□ 0.97
LINC01565-201ENST00000356020 BRD4O60885 1362 aaPredicted RBP21.08■□□□□ 0.96
LINC01565-201ENST00000356020 LRPPRCP42704 1394 aaKnown RBP21.08■□□□□ 0.96
LINC01565-201ENST00000356020 RSPH4AQ5TD94 716 aa21.07■□□□□ 0.96
LINC01565-201ENST00000356020 MYBBP1AQ9BQG0 1328 aaKnown RBP21.06■□□□□ 0.96
LINC01565-201ENST00000356020 PRAG1Q86YV5 1406 aa21.05■□□□□ 0.96
LINC01565-201ENST00000356020 RALBP1Q15311 655 aa21.05■□□□□ 0.96
LINC01565-201ENST00000356020 SYCP2Q9BX26 1530 aa21.05■□□□□ 0.96
LINC01565-201ENST00000356020 CCDC144AA2RUR9 1427 aa21.04■□□□□ 0.96
LINC01565-201ENST00000356020 LAMC1P11047 1609 aa21.04■□□□□ 0.96
LINC01565-201ENST00000356020 TTC37Q6PGP7 1564 aa21.02■□□□□ 0.96
LINC01565-201ENST00000356020 PLXNC1O60486 1568 aa21.02■□□□□ 0.96
LINC01565-201ENST00000356020 IQGAP3Q86VI3 1631 aa21.01■□□□□ 0.95
LINC01565-201ENST00000356020 ARHGAP5Q13017 1502 aa21■□□□□ 0.95
LINC01565-201ENST00000356020 GPRASP1Q5JY77 1395 aa20.99■□□□□ 0.95
LINC01565-201ENST00000356020 MYO5CQ9NQX4 1742 aa20.99■□□□□ 0.95
LINC01565-201ENST00000356020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.98■□□□□ 0.95
LINC01565-201ENST00000356020 A2MP01023 1474 aa20.98■□□□□ 0.95
LINC01565-201ENST00000356020 PLA2R1Q13018 1463 aa20.98■□□□□ 0.95
LINC01565-201ENST00000356020 CHD1O14646 1710 aa20.98■□□□□ 0.95
LINC01565-201ENST00000356020 PRDM15P57071 1507 aaPredicted RBP20.97■□□□□ 0.95
LINC01565-201ENST00000356020 SHROOM2Q13796 1616 aa20.97■□□□□ 0.95
LINC01565-201ENST00000356020 EIF2AK4Q9P2K8 1649 aaKnown RBP20.97■□□□□ 0.95
LINC01565-201ENST00000356020 PARD3Q8TEW0 1356 aa20.97■□□□□ 0.95
LINC01565-201ENST00000356020 COL17A1Q9UMD9 1497 aaPredicted RBP20.96■□□□□ 0.95
LINC01565-201ENST00000356020 PLEKHH2Q8IVE3 1493 aa20.96■□□□□ 0.95
LINC01565-201ENST00000356020 CCDC136Q96JN2 1154 aa20.95■□□□□ 0.94
LINC01565-201ENST00000356020 NLRP13Q86W25 1043 aa20.93■□□□□ 0.94
LINC01565-201ENST00000356020 MAGI2Q86UL8 1455 aa20.93■□□□□ 0.94
LINC01565-201ENST00000356020 DUOX2Q9NRD8 1548 aa20.92■□□□□ 0.94
LINC01565-201ENST00000356020 ATP10AO60312 1499 aa20.91■□□□□ 0.94
LINC01565-201ENST00000356020 ABCC2Q92887 1545 aa20.91■□□□□ 0.94
LINC01565-201ENST00000356020 SENP3-EIF4A1A0A087X0R7 540 aa20.91■□□□□ 0.94
LINC01565-201ENST00000356020 NBPF1Q3BBV0 1214 aa20.89■□□□□ 0.93
LINC01565-201ENST00000356020 RNF17Q9BXT8 1623 aaKnown RBP20.89■□□□□ 0.93
LINC01565-201ENST00000356020 RGL3Q3MIN7 710 aa20.89■□□□□ 0.93
LINC01565-201ENST00000356020 ERBINQ96RT1 1412 aa20.88■□□□□ 0.93
LINC01565-201ENST00000356020 NOP58Q9Y2X3 529 aaKnown RBP20.88■□□□□ 0.93
LINC01565-201ENST00000356020 PER1O15534 1290 aaPredicted RBP20.87■□□□□ 0.93
LINC01565-201ENST00000356020 DEKP35659 375 aaKnown RBP20.87■□□□□ 0.93
LINC01565-201ENST00000356020 WASHC2CQ9Y4E1 1318 aa20.87■□□□□ 0.93
LINC01565-201ENST00000356020 ZMYM4Q5VZL5 1548 aa20.87■□□□□ 0.93
LINC01565-201ENST00000356020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.86■□□□□ 0.93
LINC01565-201ENST00000356020 RRP1P56182 461 aaKnown RBP20.86■□□□□ 0.93
LINC01565-201ENST00000356020 DISP3Q9P2K9 1392 aa20.86■□□□□ 0.93
LINC01565-201ENST00000356020 PDE3BQ13370 1112 aa20.85■□□□□ 0.93
LINC01565-201ENST00000356020 INSRP06213 1382 aa20.85■□□□□ 0.93
LINC01565-201ENST00000356020 TESK2Q96S53 571 aa20.85■□□□□ 0.93
LINC01565-201ENST00000356020 ERCC6L2Q5T890 1561 aa20.82■□□□□ 0.92
LINC01565-201ENST00000356020 BLMP54132 1417 aaPredicted RBP20.82■□□□□ 0.92
LINC01565-201ENST00000356020 RCAN3Q9UKA8 241 aa20.81■□□□□ 0.92
LINC01565-201ENST00000356020 ABCC1P33527 1531 aa20.81■□□□□ 0.92
LINC01565-201ENST00000356020 PLCH2O75038 1416 aa20.79■□□□□ 0.92
LINC01565-201ENST00000356020 TMF1P82094 1093 aa20.79■□□□□ 0.92
LINC01565-201ENST00000356020 ZCCHC11Q5TAX3 1644 aaKnown RBP20.78■□□□□ 0.92
LINC01565-201ENST00000356020 MADDQ8WXG6 1647 aa20.77■□□□□ 0.92
LINC01565-201ENST00000356020 IQGAP1P46940 1657 aa20.77■□□□□ 0.92
LINC01565-201ENST00000356020 PANK3Q9H999 370 aa20.76■□□□□ 0.91
LINC01565-201ENST00000356020 CC2D1BQ5T0F9 858 aaKnown RBP20.75■□□□□ 0.91
LINC01565-201ENST00000356020 EXOC6Q8TAG9 804 aa20.75■□□□□ 0.91
LINC01565-201ENST00000356020 SALL2Q9Y467 1007 aaPredicted RBP20.74■□□□□ 0.91
LINC01565-201ENST00000356020 SPHKAPQ2M3C7 1700 aa20.74■□□□□ 0.91
LINC01565-201ENST00000356020 ANP32AP39687 249 aaKnown RBP20.74■□□□□ 0.91
LINC01565-201ENST00000356020 CEP152O94986 1710 aa20.73■□□□□ 0.91
LINC01565-201ENST00000356020 TRPM2O94759 1503 aa20.73■□□□□ 0.91
LINC01565-201ENST00000356020 EFCAB2Q5VUJ9 269 aa20.72■□□□□ 0.91
LINC01565-201ENST00000356020 UHRF1BP1LA0JNW5 1464 aa20.72■□□□□ 0.91
LINC01565-201ENST00000356020 TRAPPC8Q9Y2L5 1435 aa20.71■□□□□ 0.91
LINC01565-201ENST00000356020 IPO9Q96P70 1041 aaKnown RBP20.71■□□□□ 0.91
LINC01565-201ENST00000356020 WDR7Q9Y4E6 1490 aa20.7■□□□□ 0.9
LINC01565-201ENST00000356020 CDCA7LQ96GN5 454 aa20.69■□□□□ 0.9
LINC01565-201ENST00000356020 SYNMO15061 1565 aa20.69■□□□□ 0.9
LINC01565-201ENST00000356020 DEPDC5O75140 1603 aa20.68■□□□□ 0.9
LINC01565-201ENST00000356020 ZFYVE16Q7Z3T8 1539 aa20.68■□□□□ 0.9
LINC01565-201ENST00000356020 ARAP3Q8WWN8 1544 aa20.68■□□□□ 0.9
LINC01565-201ENST00000356020 PAK3O75914 559 aaPredicted RBP20.68■□□□□ 0.9
LINC01565-201ENST00000356020 TCERG1O14776 1098 aaKnown RBP20.68■□□□□ 0.9
LINC01565-201ENST00000356020 RTEL1-TNFRSF6BF6WH68 1400 aa20.67■□□□□ 0.9
LINC01565-201ENST00000356020 CLTCL1P53675 1640 aa20.66■□□□□ 0.9
LINC01565-201ENST00000356020 CLASP1Q7Z460 1538 aa20.65■□□□□ 0.9
LINC01565-201ENST00000356020 SCAPERQ9BY12 1400 aa20.65■□□□□ 0.9
LINC01565-201ENST00000356020 TET3O43151 1660 aa20.65■□□□□ 0.9
LINC01565-201ENST00000356020 PTPRTO14522 1441 aa20.65■□□□□ 0.9
LINC01565-201ENST00000356020 NBR1Q14596 966 aa20.65■□□□□ 0.9
LINC01565-201ENST00000356020 SCAF11Q99590 1463 aaKnown RBP20.65■□□□□ 0.9
LINC01565-201ENST00000356020 RTL5Q5HYW3 569 aaPredicted RBP20.64■□□□□ 0.9
LINC01565-201ENST00000356020 STAC3Q96MF2 364 aa20.63■□□□□ 0.89
LINC01565-201ENST00000356020 ZBTB47Q9UFB7 747 aaPredicted RBP20.63■□□□□ 0.89
LINC01565-201ENST00000356020 SPAG9O60271 1321 aaKnown RBP20.63■□□□□ 0.89
LINC01565-201ENST00000356020 KIAA1210Q9ULL0 1709 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms