RNA–Protein interactions for RNA: ENST00000355396.7

SUSD1-201, Transcript of sushi domain containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene SUSD1, Length 2,861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-201ENST00000355396 SETD5Q9C0A6 1442 aa17.41■□□□□ 0.38
SUSD1-201ENST00000355396 VWDEQ8N2E2 1590 aa17.41■□□□□ 0.38
SUSD1-201ENST00000355396 KDM5DQ9BY66 1539 aa17.4■□□□□ 0.38
SUSD1-201ENST00000355396 HRCP23327 699 aa17.4■□□□□ 0.38
SUSD1-201ENST00000355396 ACIN1Q9UKV3 1341 aaKnown RBP17.39■□□□□ 0.38
SUSD1-201ENST00000355396 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
SUSD1-201ENST00000355396 ADAMTSL3P82987 1691 aa17.39■□□□□ 0.37
SUSD1-201ENST00000355396 KIF3BO15066 747 aa17.37■□□□□ 0.37
SUSD1-201ENST00000355396 ZC3H13Q5T200 1668 aaKnown RBP17.36■□□□□ 0.37
SUSD1-201ENST00000355396 LMTK2Q8IWU2 1503 aa17.36■□□□□ 0.37
SUSD1-201ENST00000355396 IQGAP3Q86VI3 1631 aa17.35■□□□□ 0.37
SUSD1-201ENST00000355396 RAB3GAP2Q9H2M9 1393 aa17.34■□□□□ 0.37
SUSD1-201ENST00000355396 MROH2AA6NES4 1674 aa17.33■□□□□ 0.36
SUSD1-201ENST00000355396 ABCC3O15438 1527 aa17.32■□□□□ 0.36
SUSD1-201ENST00000355396 ARID4BQ4LE39 1312 aaPredicted RBP17.32■□□□□ 0.36
SUSD1-201ENST00000355396 FER1L4A9Z1Z3 1794 aa17.31■□□□□ 0.36
SUSD1-201ENST00000355396 CNTLNQ9NXG0 1405 aa17.31■□□□□ 0.36
SUSD1-201ENST00000355396 MADDQ8WXG6 1647 aa17.3■□□□□ 0.36
SUSD1-201ENST00000355396 CEP152O94986 1710 aa17.28■□□□□ 0.36
SUSD1-201ENST00000355396 KANK1Q14678 1352 aa17.28■□□□□ 0.36
SUSD1-201ENST00000355396 TET3O43151 1660 aa17.28■□□□□ 0.36
SUSD1-201ENST00000355396 GGT6Q6P531 493 aa17.28■□□□□ 0.36
SUSD1-201ENST00000355396 CLTCQ00610 1675 aaKnown RBP17.28■□□□□ 0.36
SUSD1-201ENST00000355396 ARHGAP31Q2M1Z3 1444 aa17.27■□□□□ 0.36
SUSD1-201ENST00000355396 PZPP20742 1482 aa17.27■□□□□ 0.36
SUSD1-201ENST00000355396 CAMSAP1Q5T5Y3 1602 aa17.27■□□□□ 0.36
SUSD1-201ENST00000355396 NUP155O75694 1391 aa17.26■□□□□ 0.35
SUSD1-201ENST00000355396 EFCAB6Q5THR3 1501 aa17.25■□□□□ 0.35
SUSD1-201ENST00000355396 RIMS1Q86UR5 1692 aaKnown RBP17.24■□□□□ 0.35
SUSD1-201ENST00000355396 MLECQ14165 292 aa17.24■□□□□ 0.35
SUSD1-201ENST00000355396 WASHC2CQ9Y4E1 1318 aa17.23■□□□□ 0.35
SUSD1-201ENST00000355396 RPRD2Q5VT52 1461 aaKnown RBP17.23■□□□□ 0.35
SUSD1-201ENST00000355396 KDM4FA0A1W2PPD8 638 aa17.22■□□□□ 0.35
SUSD1-201ENST00000355396 C3P01024 1663 aa17.22■□□□□ 0.35
SUSD1-201ENST00000355396 E9PCH4 1651 aa17.21■□□□□ 0.35
SUSD1-201ENST00000355396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.353e-6■■□□□ 12.8
SUSD1-201ENST00000355396 ZMYM3Q14202 1370 aa17.21■□□□□ 0.34
SUSD1-201ENST00000355396 PTPRMP28827 1452 aa17.2■□□□□ 0.34
SUSD1-201ENST00000355396 NPATQ14207 1427 aa17.19■□□□□ 0.34
SUSD1-201ENST00000355396 SPATA31D1Q6ZQQ2 1576 aa17.18■□□□□ 0.34
SUSD1-201ENST00000355396 TRIM52Q96A61 297 aa17.17■□□□□ 0.34
SUSD1-201ENST00000355396 ESF1Q9H501 851 aaKnown RBP17.17■□□□□ 0.34
SUSD1-201ENST00000355396 PREX1Q8TCU6 1659 aa17.17■□□□□ 0.34
SUSD1-201ENST00000355396 MPHOSPH9Q99550 1183 aa17.16■□□□□ 0.34
SUSD1-201ENST00000355396 NOS1P29475 1434 aa17.16■□□□□ 0.34
SUSD1-201ENST00000355396 PTPRTO14522 1441 aa17.15■□□□□ 0.34
SUSD1-201ENST00000355396 ERVK-7P63135 1459 aa17.14■□□□□ 0.33
SUSD1-201ENST00000355396 SLC4A1APQ9BWU0 796 aaKnown RBP17.14■□□□□ 0.33
SUSD1-201ENST00000355396 SPHKAPQ2M3C7 1700 aa17.12■□□□□ 0.33
SUSD1-201ENST00000355396 DHX57Q6P158 1386 aaKnown RBP17.11■□□□□ 0.33
SUSD1-201ENST00000355396 SYNMO15061 1565 aa17.11■□□□□ 0.33
SUSD1-201ENST00000355396 PKD2Q13563 968 aa17.11■□□□□ 0.33
SUSD1-201ENST00000355396 PIK3C2BO00750 1634 aa17.11■□□□□ 0.33
SUSD1-201ENST00000355396 TRPM2O94759 1503 aa17.1■□□□□ 0.33
SUSD1-201ENST00000355396 PLA2R1Q13018 1463 aa17.1■□□□□ 0.33
SUSD1-201ENST00000355396 SETD1BQ9UPS6 1966 aaKnown RBP17.08■□□□□ 0.32
SUSD1-201ENST00000355396 CEBPAP49715 358 aaPredicted RBP17.07■□□□□ 0.32
SUSD1-201ENST00000355396 FBXO31Q5XUX0 539 aaPredicted RBP17.07■□□□□ 0.32
SUSD1-201ENST00000355396 KDM5AP29375 1690 aaKnown RBP17.06■□□□□ 0.32
SUSD1-201ENST00000355396 ANKRD30BQ9BXX2 1392 aa17.06■□□□□ 0.32
SUSD1-201ENST00000355396 NLRP1Q9C000 1473 aa17.06■□□□□ 0.32
SUSD1-201ENST00000355396 TNRQ92752 1358 aa17.06■□□□□ 0.32
SUSD1-201ENST00000355396 ZNF142P52746 1687 aaPredicted RBP17.06■□□□□ 0.32
SUSD1-201ENST00000355396 MYO3AQ8NEV4 1616 aa17.05■□□□□ 0.32
SUSD1-201ENST00000355396 CFAP65Q6ZU64 1925 aaKnown RBP17.04■□□□□ 0.32
SUSD1-201ENST00000355396 NEURL4Q96JN8 1562 aa17.03■□□□□ 0.32
SUSD1-201ENST00000355396 CLTCL1P53675 1640 aa17.03■□□□□ 0.32
SUSD1-201ENST00000355396 SLC52A1Q9NWF4 448 aa17.03■□□□□ 0.32
SUSD1-201ENST00000355396 AEBP2Q6ZN18 517 aaPredicted RBP17.02■□□□□ 0.31
SUSD1-201ENST00000355396 A2ML1A8K2U0 1454 aa17.01■□□□□ 0.31
SUSD1-201ENST00000355396 FOXD1Q16676 465 aa17■□□□□ 0.31
SUSD1-201ENST00000355396 CLSPNQ9HAW4 1339 aa16.99■□□□□ 0.31
SUSD1-201ENST00000355396 UGGT1Q9NYU2 1555 aa16.99■□□□□ 0.31
SUSD1-201ENST00000355396 CEP170BQ9Y4F5 1589 aaPredicted RBP16.99■□□□□ 0.31
SUSD1-201ENST00000355396 TMEM131LA2VDJ0 1609 aa16.98■□□□□ 0.31
SUSD1-201ENST00000355396 UBR1Q8IWV7 1749 aa16.98■□□□□ 0.31
SUSD1-201ENST00000355396 ADGRB3O60242 1522 aa16.98■□□□□ 0.31
SUSD1-201ENST00000355396 IDI1Q13907 227 aa16.97■□□□□ 0.31
SUSD1-201ENST00000355396 UHRF1BP1Q6BDS2 1440 aa16.97■□□□□ 0.31
SUSD1-201ENST00000355396 CCDC144AA2RUR9 1427 aa16.97■□□□□ 0.31
SUSD1-201ENST00000355396 KIF1BO60333 1816 aa16.97■□□□□ 0.31
SUSD1-201ENST00000355396 LMTK3Q96Q04 1460 aa16.94■□□□□ 0.3
SUSD1-201ENST00000355396 SPATA31E1Q6ZUB1 1445 aa16.94■□□□□ 0.3
SUSD1-201ENST00000355396 SLIT1O75093 1534 aa16.92■□□□□ 0.3
SUSD1-201ENST00000355396 ARHGAP23Q9P227 1491 aa16.92■□□□□ 0.3
SUSD1-201ENST00000355396 MYO5BQ9ULV0 1848 aa16.92■□□□□ 0.3
SUSD1-201ENST00000355396 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
SUSD1-201ENST00000355396 IFT172Q9UG01 1749 aa16.88■□□□□ 0.29
SUSD1-201ENST00000355396 ZFYVE9O95405 1425 aa16.88■□□□□ 0.29
SUSD1-201ENST00000355396 THEMISQ8N1K5 641 aaPredicted RBP16.87■□□□□ 0.29
SUSD1-201ENST00000355396 NEXMIFQ5QGS0 1516 aa16.87■□□□□ 0.29
SUSD1-201ENST00000355396 TMEM2Q9UHN6 1383 aa16.86■□□□□ 0.29
SUSD1-201ENST00000355396 RPGRIP1LQ68CZ1 1315 aa16.86■□□□□ 0.29
SUSD1-201ENST00000355396 PPLO60437 1756 aa16.86■□□□□ 0.29
SUSD1-201ENST00000355396 CCER1Q8TC90 406 aaPredicted RBP16.83■□□□□ 0.29
SUSD1-201ENST00000355396 SIN3AQ96ST3 1273 aa16.83■□□□□ 0.29
SUSD1-201ENST00000355396 RIMS2Q9UQ26 1411 aa16.82■□□□□ 0.28
SUSD1-201ENST00000355396 POLR1AO95602 1720 aaPredicted RBP16.82■□□□□ 0.28
SUSD1-201ENST00000355396 MYOM2P54296 1465 aa16.82■□□□□ 0.28
SUSD1-201ENST00000355396 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms