RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 THEMISQ8N1K5 641 aaPredicted RBP25.86■■□□□ 1.73
DDX55-202ENST00000354291 INO80Q9ULG1 1556 aaPredicted RBP25.86■■□□□ 1.73
DDX55-202ENST00000354291 ZNF644Q9H582 1327 aaPredicted RBP25.86■■□□□ 1.73
DDX55-202ENST00000354291 KIF3BO15066 747 aa25.84■■□□□ 1.73
DDX55-202ENST00000354291 NEURL4Q96JN8 1562 aa25.82■■□□□ 1.72
DDX55-202ENST00000354291 WASHC2CQ9Y4E1 1318 aa25.81■■□□□ 1.72
DDX55-202ENST00000354291 FYCO1Q9BQS8 1478 aa25.8■■□□□ 1.72
DDX55-202ENST00000354291 DHX29Q7Z478 1369 aaKnown RBP25.8■■□□□ 1.72
DDX55-202ENST00000354291 NPHP4O75161 1426 aaPredicted RBP25.78■■□□□ 1.72
DDX55-202ENST00000354291 POLR1AO95602 1720 aaPredicted RBP25.77■■□□□ 1.72
DDX55-202ENST00000354291 VWDEQ8N2E2 1590 aa25.77■■□□□ 1.72
DDX55-202ENST00000354291 ADGBQ8N7X0 1667 aa25.76■■□□□ 1.71
DDX55-202ENST00000354291 MTUS2Q5JR59 1369 aa25.75■■□□□ 1.71
DDX55-202ENST00000354291 ALKQ9UM73 1620 aa25.74■■□□□ 1.71
DDX55-202ENST00000354291 MIA2Q96PC5 1412 aa25.74■■□□□ 1.71
DDX55-202ENST00000354291 RGS17Q9UGC6 210 aaPredicted RBP25.74■■□□□ 1.71
DDX55-202ENST00000354291 PZPP20742 1482 aa25.72■■□□□ 1.71
DDX55-202ENST00000354291 RTEL1-TNFRSF6BF6WH68 1400 aa25.71■■□□□ 1.71
DDX55-202ENST00000354291 FAM135AQ9P2D6 1515 aa25.71■■□□□ 1.71
DDX55-202ENST00000354291 MBD5Q9P267 1494 aa25.7■■□□□ 1.7
DDX55-202ENST00000354291 MED14O60244 1454 aa25.69■■□□□ 1.7
DDX55-202ENST00000354291 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
DDX55-202ENST00000354291 UGGT1Q9NYU2 1555 aa25.69■■□□□ 1.7
DDX55-202ENST00000354291 NLRP1Q9C000 1473 aa25.67■■□□□ 1.7
DDX55-202ENST00000354291 LRRC7Q96NW7 1537 aa25.67■■□□□ 1.7
DDX55-202ENST00000354291 KDM5DQ9BY66 1539 aa25.66■■□□□ 1.7
DDX55-202ENST00000354291 DEPDC5O75140 1603 aa25.62■■□□□ 1.69
DDX55-202ENST00000354291 IQGAP1P46940 1657 aa25.59■■□□□ 1.69
DDX55-202ENST00000354291 POTEAQ6S8J7 498 aa25.59■■□□□ 1.69
DDX55-202ENST00000354291 RSPH4AQ5TD94 716 aa25.58■■□□□ 1.69
DDX55-202ENST00000354291 TIAM1Q13009 1591 aa25.57■■□□□ 1.68
DDX55-202ENST00000354291 STRCP1A6NGW2 1772 aa25.57■■□□□ 1.68
DDX55-202ENST00000354291 TSPY4P0CV99 314 aa25.55■■□□□ 1.68
DDX55-202ENST00000354291 TSPY10P0CW01 314 aa25.55■■□□□ 1.68
DDX55-202ENST00000354291 RNF17Q9BXT8 1623 aaKnown RBP25.55■■□□□ 1.68
DDX55-202ENST00000354291 CCDC141Q6ZP82 1450 aa25.54■■□□□ 1.68
DDX55-202ENST00000354291 TXNDC2Q86VQ3 553 aa25.52■■□□□ 1.68
DDX55-202ENST00000354291 LTKP29376 864 aa25.5■■□□□ 1.67
DDX55-202ENST00000354291 CEP162Q5TB80 1403 aa25.49■■□□□ 1.67
DDX55-202ENST00000354291 SYNMO15061 1565 aa25.48■■□□□ 1.67
DDX55-202ENST00000354291 EHBP1L1Q8N3D4 1523 aa25.46■■□□□ 1.67
DDX55-202ENST00000354291 CAMSAP2Q08AD1 1489 aa25.46■■□□□ 1.67
DDX55-202ENST00000354291 EID1Q9Y6B2 187 aa25.45■■□□□ 1.66
DDX55-202ENST00000354291 FAM135BQ49AJ0 1406 aa25.45■■□□□ 1.66
DDX55-202ENST00000354291 SCAF11Q99590 1463 aaKnown RBP25.44■■□□□ 1.66
DDX55-202ENST00000354291 ERVK-7P63135 1459 aa25.43■■□□□ 1.66
DDX55-202ENST00000354291 ABCC3O15438 1527 aa25.42■■□□□ 1.66
DDX55-202ENST00000354291 ZC3H13Q5T200 1668 aaKnown RBP25.39■■□□□ 1.66
DDX55-202ENST00000354291 RBM33Q96EV2 1170 aaKnown RBP25.39■■□□□ 1.66
DDX55-202ENST00000354291 CFAP65Q6ZU64 1925 aaKnown RBP25.39■■□□□ 1.65
DDX55-202ENST00000354291 NCOA2Q15596 1464 aa25.38■■□□□ 1.65
DDX55-202ENST00000354291 TMEM94Q12767 1356 aa25.37■■□□□ 1.65
DDX55-202ENST00000354291 PROSER2Q86WR7 435 aaPredicted RBP25.36■■□□□ 1.65
DDX55-202ENST00000354291 STAG3Q9UJ98 1225 aa25.36■■□□□ 1.65
DDX55-202ENST00000354291 UBR1Q8IWV7 1749 aa25.34■■□□□ 1.65
DDX55-202ENST00000354291 ARHGAP23Q9P227 1491 aa25.33■■□□□ 1.65
DDX55-202ENST00000354291 XIRP1Q702N8 1843 aaKnown RBP25.33■■□□□ 1.64
DDX55-202ENST00000354291 KCNA6P17658 529 aa25.32■■□□□ 1.64
DDX55-202ENST00000354291 SLC26A8Q96RN1 970 aa25.31■■□□□ 1.64
DDX55-202ENST00000354291 ARHGEF5Q12774 1597 aa25.31■■□□□ 1.64
DDX55-202ENST00000354291 SLIT1O75093 1534 aa25.3■■□□□ 1.64
DDX55-202ENST00000354291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.28■■□□□ 1.647e-10■■■■□ 26.7
DDX55-202ENST00000354291 TMEM2Q9UHN6 1383 aa25.28■■□□□ 1.64
DDX55-202ENST00000354291 BCANQ96GW7 911 aa25.25■■□□□ 1.63
DDX55-202ENST00000354291 SLAIN2Q9P270 581 aa25.25■■□□□ 1.63
DDX55-202ENST00000354291 ROBO1Q9Y6N7 1651 aa25.25■■□□□ 1.63
DDX55-202ENST00000354291 SETD1AO15047 1707 aaKnown RBP25.23■■□□□ 1.63
DDX55-202ENST00000354291 CEP152O94986 1710 aa25.23■■□□□ 1.63
DDX55-202ENST00000354291 UPF1Q92900 1129 aaKnown RBP eCLIP25.23■■□□□ 1.63
DDX55-202ENST00000354291 MROH1Q8NDA8 1641 aa25.22■■□□□ 1.63
DDX55-202ENST00000354291 JCADQ9P266 1359 aa25.21■■□□□ 1.63
DDX55-202ENST00000354291 IDI1Q13907 227 aa25.21■■□□□ 1.63
DDX55-202ENST00000354291 TRIM52Q96A61 297 aa25.21■■□□□ 1.63
DDX55-202ENST00000354291 MEX3CQ5U5Q3 659 aaKnown RBP25.2■■□□□ 1.62
DDX55-202ENST00000354291 ARHGAP31Q2M1Z3 1444 aa25.2■■□□□ 1.62
DDX55-202ENST00000354291 MSH6P52701 1360 aa25.19■■□□□ 1.62
DDX55-202ENST00000354291 EIF2AK4Q9P2K8 1649 aaKnown RBP25.19■■□□□ 1.62
DDX55-202ENST00000354291 MAST1Q9Y2H9 1570 aa25.18■■□□□ 1.62
DDX55-202ENST00000354291 RRP7BPQ9NSQ0 103 aa25.18■■□□□ 1.62
DDX55-202ENST00000354291 LRRC9Q6ZRR7 1453 aa25.17■■□□□ 1.62
DDX55-202ENST00000354291 MAP3K1Q13233 1512 aa25.17■■□□□ 1.62
DDX55-202ENST00000354291 PIK3C2BO00750 1634 aa25.15■■□□□ 1.62
DDX55-202ENST00000354291 ZNF772Q68DY9 489 aaPredicted RBP25.15■■□□□ 1.62
DDX55-202ENST00000354291 DUOX2Q9NRD8 1548 aa25.15■■□□□ 1.62
DDX55-202ENST00000354291 PRDM15P57071 1507 aaPredicted RBP25.13■■□□□ 1.61
DDX55-202ENST00000354291 KIF15Q9NS87 1388 aa25.12■■□□□ 1.61
DDX55-202ENST00000354291 PHLPP1O60346 1717 aa25.12■■□□□ 1.61
DDX55-202ENST00000354291 EFCAB6Q5THR3 1501 aa25.12■■□□□ 1.61
DDX55-202ENST00000354291 KANK1Q14678 1352 aa25.11■■□□□ 1.61
DDX55-202ENST00000354291 TET3O43151 1660 aa25.1■■□□□ 1.61
DDX55-202ENST00000354291 MYOM3Q5VTT5 1437 aa25.09■■□□□ 1.61
DDX55-202ENST00000354291 RXRBP28702 533 aa25.08■■□□□ 1.61
DDX55-202ENST00000354291 C14orf37Q86TY3 774 aa25.08■■□□□ 1.61
DDX55-202ENST00000354291 SPATA31A6Q5VVP1 1343 aa25.08■■□□□ 1.6
DDX55-202ENST00000354291 KANK4Q5T7N3 995 aaPredicted RBP25.07■■□□□ 1.6
DDX55-202ENST00000354291 NKTRP30414 1462 aaKnown RBP25.07■■□□□ 1.6
DDX55-202ENST00000354291 SRCAPQ6ZRS2 3230 aa25.06■■□□□ 1.6
DDX55-202ENST00000354291 LRP6O75581 1613 aa25.04■■□□□ 1.6
DDX55-202ENST00000354291 ERBINQ96RT1 1412 aa25.03■■□□□ 1.6
DDX55-202ENST00000354291 NUTM2BA6NNL0 878 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms