RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.61■■■□□ 2.33
SIGMAR1-202ENST00000353468 ARHGEF40Q8TER5 1519 aa29.61■■■□□ 2.33
SIGMAR1-202ENST00000353468 KDM5DQ9BY66 1539 aa29.59■■■□□ 2.33
SIGMAR1-202ENST00000353468 SLC4A1APQ9BWU0 796 aaKnown RBP29.58■■■□□ 2.33
SIGMAR1-202ENST00000353468 PZPP20742 1482 aa29.58■■■□□ 2.33
SIGMAR1-202ENST00000353468 REREQ9P2R6 1566 aa29.58■■■□□ 2.33
SIGMAR1-202ENST00000353468 DEPDC5O75140 1603 aa29.55■■■□□ 2.32
SIGMAR1-202ENST00000353468 BCORL1Q5H9F3 1711 aa29.55■■■□□ 2.32
SIGMAR1-202ENST00000353468 CLSPNQ9HAW4 1339 aa29.54■■■□□ 2.32
SIGMAR1-202ENST00000353468 RNF17Q9BXT8 1623 aaKnown RBP29.51■■■□□ 2.31
SIGMAR1-202ENST00000353468 FAM135AQ9P2D6 1515 aa29.51■■■□□ 2.31
SIGMAR1-202ENST00000353468 KANK1Q14678 1352 aa29.51■■■□□ 2.31
SIGMAR1-202ENST00000353468 GGT6Q6P531 493 aa29.51■■■□□ 2.31
SIGMAR1-202ENST00000353468 AGLP35573 1532 aa29.5■■■□□ 2.31
SIGMAR1-202ENST00000353468 IQGAP3Q86VI3 1631 aa29.5■■■□□ 2.31
SIGMAR1-202ENST00000353468 MROH1Q8NDA8 1641 aa29.49■■■□□ 2.31
SIGMAR1-202ENST00000353468 PRDM15P57071 1507 aaPredicted RBP29.49■■■□□ 2.31
SIGMAR1-202ENST00000353468 PKD2Q13563 968 aa29.47■■■□□ 2.31
SIGMAR1-202ENST00000353468 VWDEQ8N2E2 1590 aa29.45■■■□□ 2.31
SIGMAR1-202ENST00000353468 FOXD1Q16676 465 aa29.44■■■□□ 2.3
SIGMAR1-202ENST00000353468 SIGLEC1Q9BZZ2 1709 aa29.44■■■□□ 2.3
SIGMAR1-202ENST00000353468 ARID4BQ4LE39 1312 aaPredicted RBP29.38■■■□□ 2.29
SIGMAR1-202ENST00000353468 WASHC2CQ9Y4E1 1318 aa29.38■■■□□ 2.29
SIGMAR1-202ENST00000353468 PPP6R1Q9UPN7 881 aa29.36■■■□□ 2.29
SIGMAR1-202ENST00000353468 LMTK2Q8IWU2 1503 aa29.36■■■□□ 2.29
SIGMAR1-202ENST00000353468 ZEB1P37275 1124 aaPredicted RBP29.35■■■□□ 2.29
SIGMAR1-202ENST00000353468 ANKRD30BQ9BXX2 1392 aa29.35■■■□□ 2.29
SIGMAR1-202ENST00000353468 TET3O43151 1660 aa29.35■■■□□ 2.29
SIGMAR1-202ENST00000353468 MLECQ14165 292 aa29.35■■■□□ 2.29
SIGMAR1-202ENST00000353468 SIN3AQ96ST3 1273 aa29.34■■■□□ 2.29
SIGMAR1-202ENST00000353468 CEP152O94986 1710 aa29.33■■■□□ 2.29
SIGMAR1-202ENST00000353468 ABCC3O15438 1527 aa29.33■■■□□ 2.29
SIGMAR1-202ENST00000353468 E9PCH4 1651 aa29.28■■■□□ 2.28
SIGMAR1-202ENST00000353468 ZC3H13Q5T200 1668 aaKnown RBP29.28■■■□□ 2.28
SIGMAR1-202ENST00000353468 NEUROD1Q13562 356 aa29.28■■■□□ 2.28
SIGMAR1-202ENST00000353468 EFCAB6Q5THR3 1501 aa29.27■■■□□ 2.28
SIGMAR1-202ENST00000353468 CAMSAP1Q5T5Y3 1602 aa29.23■■■□□ 2.27
SIGMAR1-202ENST00000353468 PLA2R1Q13018 1463 aa29.21■■■□□ 2.27
SIGMAR1-202ENST00000353468 RPRD2Q5VT52 1461 aaKnown RBP29.21■■■□□ 2.27
SIGMAR1-202ENST00000353468 ESF1Q9H501 851 aaKnown RBP29.21■■■□□ 2.27
SIGMAR1-202ENST00000353468 NPATQ14207 1427 aa29.2■■■□□ 2.27
SIGMAR1-202ENST00000353468 ARHGAP31Q2M1Z3 1444 aa29.2■■■□□ 2.26
SIGMAR1-202ENST00000353468 PTPRTO14522 1441 aa29.18■■■□□ 2.26
SIGMAR1-202ENST00000353468 CLTCQ00610 1675 aaKnown RBP29.18■■■□□ 2.26
SIGMAR1-202ENST00000353468 SPHKAPQ2M3C7 1700 aa29.15■■■□□ 2.26
SIGMAR1-202ENST00000353468 CCDC144AA2RUR9 1427 aa29.14■■■□□ 2.26
SIGMAR1-202ENST00000353468 TIMELESSQ9UNS1 1208 aa29.13■■■□□ 2.25
SIGMAR1-202ENST00000353468 CFAP65Q6ZU64 1925 aaKnown RBP29.13■■■□□ 2.25
SIGMAR1-202ENST00000353468 CNTLNQ9NXG0 1405 aa29.12■■■□□ 2.25
SIGMAR1-202ENST00000353468 TRPM2O94759 1503 aa29.12■■■□□ 2.25
SIGMAR1-202ENST00000353468 ZMYM3Q14202 1370 aa29.1■■■□□ 2.25
SIGMAR1-202ENST00000353468 TONSLQ96HA7 1378 aa29.1■■■□□ 2.25
SIGMAR1-202ENST00000353468 NOS1P29475 1434 aa29.08■■■□□ 2.25
SIGMAR1-202ENST00000353468 FBXO31Q5XUX0 539 aaPredicted RBP29.05■■■□□ 2.24
SIGMAR1-202ENST00000353468 FER1L4A9Z1Z3 1794 aa29.05■■■□□ 2.24
SIGMAR1-202ENST00000353468 MROH2AA6NES4 1674 aa29.04■■■□□ 2.24
SIGMAR1-202ENST00000353468 PREX1Q8TCU6 1659 aa29.03■■■□□ 2.24
SIGMAR1-202ENST00000353468 CLTCL1P53675 1640 aa29.02■■■□□ 2.24
SIGMAR1-202ENST00000353468 ERVK-7P63135 1459 aa29.01■■■□□ 2.23
SIGMAR1-202ENST00000353468 L3MBTL2Q969R5 705 aa29■■■□□ 2.23
SIGMAR1-202ENST00000353468 ADAMTSL3P82987 1691 aa28.99■■■□□ 2.23
SIGMAR1-202ENST00000353468 SYNMO15061 1565 aa28.99■■■□□ 2.23
SIGMAR1-202ENST00000353468 UGGT1Q9NYU2 1555 aa28.99■■■□□ 2.23
SIGMAR1-202ENST00000353468 MADDQ8WXG6 1647 aa28.97■■■□□ 2.23
SIGMAR1-202ENST00000353468 SPATA31D1Q6ZQQ2 1576 aa28.97■■■□□ 2.23
SIGMAR1-202ENST00000353468 SLC52A1Q9NWF4 448 aa28.96■■■□□ 2.23
SIGMAR1-202ENST00000353468 PPP1R15AO75807 674 aaPredicted RBP28.95■■■□□ 2.22
SIGMAR1-202ENST00000353468 CEBPAP49715 358 aaPredicted RBP28.94■■■□□ 2.22
SIGMAR1-202ENST00000353468 RGL3Q3MIN7 710 aa28.94■■■□□ 2.22
SIGMAR1-202ENST00000353468 SPATA31E1Q6ZUB1 1445 aa28.93■■■□□ 2.22
SIGMAR1-202ENST00000353468 PIK3C2BO00750 1634 aa28.93■■■□□ 2.22
SIGMAR1-202ENST00000353468 IDI1Q13907 227 aa28.92■■■□□ 2.22
SIGMAR1-202ENST00000353468 C3P01024 1663 aa28.92■■■□□ 2.22
SIGMAR1-202ENST00000353468 RIMS1Q86UR5 1692 aaKnown RBP28.91■■■□□ 2.22
SIGMAR1-202ENST00000353468 KIF1BO60333 1816 aa28.9■■■□□ 2.22
SIGMAR1-202ENST00000353468 CHGAP10645 457 aaKnown RBP28.88■■■□□ 2.21
SIGMAR1-202ENST00000353468 TNRQ92752 1358 aa28.88■■■□□ 2.21
SIGMAR1-202ENST00000353468 NEURL4Q96JN8 1562 aa28.87■■■□□ 2.21
SIGMAR1-202ENST00000353468 PLPPR3Q6T4P5 718 aa28.87■■■□□ 2.21
SIGMAR1-202ENST00000353468 DCAF11Q8TEB1 546 aa28.85■■■□□ 2.21
SIGMAR1-202ENST00000353468 ADGRB3O60242 1522 aa28.83■■■□□ 2.21
SIGMAR1-202ENST00000353468 KDM2AQ9Y2K7 1162 aa28.82■■■□□ 2.2
SIGMAR1-202ENST00000353468 ZNF326Q5BKZ1 582 aaKnown RBP28.79■■■□□ 2.2
SIGMAR1-202ENST00000353468 STAG3Q9UJ98 1225 aa28.78■■■□□ 2.2
SIGMAR1-202ENST00000353468 TMEM131LA2VDJ0 1609 aa28.77■■■□□ 2.2
SIGMAR1-202ENST00000353468 STAC3Q96MF2 364 aa28.76■■■□□ 2.19
SIGMAR1-202ENST00000353468 NBPF8Q3BBV2 869 aa28.75■■■□□ 2.19
SIGMAR1-202ENST00000353468 PTPRMP28827 1452 aa28.75■■■□□ 2.19
SIGMAR1-202ENST00000353468 RPGRIP1LQ68CZ1 1315 aa28.74■■■□□ 2.19
SIGMAR1-202ENST00000353468 NLRP1Q9C000 1473 aa28.74■■■□□ 2.19
SIGMAR1-202ENST00000353468 UHRF1BP1Q6BDS2 1440 aa28.73■■■□□ 2.19
SIGMAR1-202ENST00000353468 MYO5BQ9ULV0 1848 aa28.71■■■□□ 2.19
SIGMAR1-202ENST00000353468 A2ML1A8K2U0 1454 aa28.7■■■□□ 2.19
SIGMAR1-202ENST00000353468 KDM4FA0A1W2PPD8 638 aa28.69■■■□□ 2.18
SIGMAR1-202ENST00000353468 IFT172Q9UG01 1749 aa28.68■■■□□ 2.18
SIGMAR1-202ENST00000353468 PRAG1Q86YV5 1406 aa28.68■■■□□ 2.18
SIGMAR1-202ENST00000353468 SETD1BQ9UPS6 1966 aaKnown RBP28.66■■■□□ 2.18
SIGMAR1-202ENST00000353468 PPLO60437 1756 aa28.66■■■□□ 2.18
SIGMAR1-202ENST00000353468 MYOM2P54296 1465 aa28.66■■■□□ 2.18
SIGMAR1-202ENST00000353468 KDM5AP29375 1690 aaKnown RBP28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms