RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 ZNF644Q9H582 1327 aaPredicted RBP18.65■□□□□ 0.58
RLIM-202ENST00000349225 CDK13Q14004 1512 aaKnown RBP18.65■□□□□ 0.58
RLIM-202ENST00000349225 PARD3Q8TEW0 1356 aa18.64■□□□□ 0.57
RLIM-202ENST00000349225 ST20-MTHFSA0A0A6YYL1 179 aa18.64■□□□□ 0.57
RLIM-202ENST00000349225 RALGAPBQ86X10 1494 aa18.62■□□□□ 0.57
RLIM-202ENST00000349225 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
RLIM-202ENST00000349225 CENPQQ7L2Z9 268 aaPredicted RBP18.62■□□□□ 0.57
RLIM-202ENST00000349225 NLRP13Q86W25 1043 aa18.62■□□□□ 0.57
RLIM-202ENST00000349225 DNMT1P26358 1616 aaKnown RBP18.62■□□□□ 0.57
RLIM-202ENST00000349225 VSIG10Q8N0Z9 540 aa18.61■□□□□ 0.57
RLIM-202ENST00000349225 EPRSP07814 1512 aaKnown RBP18.61■□□□□ 0.57
RLIM-202ENST00000349225 BLMP54132 1417 aaPredicted RBP18.61■□□□□ 0.57
RLIM-202ENST00000349225 ARID3CA6NKF2 412 aa18.6■□□□□ 0.57
RLIM-202ENST00000349225 RGS3P49796 1198 aa18.6■□□□□ 0.57
RLIM-202ENST00000349225 CARD11Q9BXL7 1154 aa18.59■□□□□ 0.57
RLIM-202ENST00000349225 UHRF1BP1Q6BDS2 1440 aa18.59■□□□□ 0.57
RLIM-202ENST00000349225 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
RLIM-202ENST00000349225 GAPVD1Q14C86 1478 aa18.58■□□□□ 0.56
RLIM-202ENST00000349225 PER1O15534 1290 aaPredicted RBP18.57■□□□□ 0.56
RLIM-202ENST00000349225 KIAA1107Q9UPP5 1409 aa18.57■□□□□ 0.56
RLIM-202ENST00000349225 SEC24BO95487 1268 aa18.57■□□□□ 0.56
RLIM-202ENST00000349225 VIRMAQ69YN4 1812 aaKnown RBP18.57■□□□□ 0.56
RLIM-202ENST00000349225 ZNF608Q9ULD9 1512 aaPredicted RBP18.57■□□□□ 0.56
RLIM-202ENST00000349225 ZMYM4Q5VZL5 1548 aa18.55■□□□□ 0.56
RLIM-202ENST00000349225 XRCC6P12956 609 aaKnown RBP eCLIP18.54■□□□□ 0.566e-6■□□□□ 9.2
RLIM-202ENST00000349225 PANK2Q9BZ23 570 aa18.54■□□□□ 0.56
RLIM-202ENST00000349225 PKD2Q13563 968 aa18.53■□□□□ 0.56
RLIM-202ENST00000349225 ARXQ96QS3 562 aa18.53■□□□□ 0.56
RLIM-202ENST00000349225 SLKQ9H2G2 1235 aaPredicted RBP18.53■□□□□ 0.56
RLIM-202ENST00000349225 ANTXR1Q9H6X2 564 aa18.52■□□□□ 0.56
RLIM-202ENST00000349225 NLRP1Q9C000 1473 aa18.52■□□□□ 0.55
RLIM-202ENST00000349225 KIAA0586Q9BVV6 1533 aa18.51■□□□□ 0.55
RLIM-202ENST00000349225 DUSP27Q5VZP5 1158 aa18.51■□□□□ 0.55
RLIM-202ENST00000349225 PLEKHH1Q9ULM0 1364 aa18.51■□□□□ 0.55
RLIM-202ENST00000349225 NAP1L5Q96NT1 182 aaPredicted RBP18.5■□□□□ 0.55
RLIM-202ENST00000349225 CC2D1BQ5T0F9 858 aaKnown RBP18.49■□□□□ 0.55
RLIM-202ENST00000349225 GLIPR1L2Q4G1C9 344 aa18.49■□□□□ 0.55
RLIM-202ENST00000349225 KDM2AQ9Y2K7 1162 aa18.48■□□□□ 0.55
RLIM-202ENST00000349225 CLCN1P35523 988 aa18.48■□□□□ 0.55
RLIM-202ENST00000349225 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
RLIM-202ENST00000349225 HSP90AA2PQ14568 343 aaPredicted RBP18.48■□□□□ 0.55
RLIM-202ENST00000349225 FSD2A1L4K1 749 aa18.47■□□□□ 0.55
RLIM-202ENST00000349225 L1TD1Q5T7N2 865 aaKnown RBP18.47■□□□□ 0.55
RLIM-202ENST00000349225 IGHDP01880 384 aa18.46■□□□□ 0.55
RLIM-202ENST00000349225 INSRP06213 1382 aa18.46■□□□□ 0.55
RLIM-202ENST00000349225 ADAMTS8Q9UP79 889 aa18.46■□□□□ 0.54
RLIM-202ENST00000349225 PNNQ9H307 717 aaKnown RBP18.45■□□□□ 0.54
RLIM-202ENST00000349225 PLEKHH2Q8IVE3 1493 aa18.45■□□□□ 0.54
RLIM-202ENST00000349225 RRP9O43818 475 aaKnown RBP18.44■□□□□ 0.54
RLIM-202ENST00000349225 ARHGEF12Q9NZN5 1544 aa18.44■□□□□ 0.54
RLIM-202ENST00000349225 ZNF521Q96K83 1311 aa18.43■□□□□ 0.54
RLIM-202ENST00000349225 HSP90AA1P07900 732 aaKnown RBP18.42■□□□□ 0.54
RLIM-202ENST00000349225 ERBB4Q15303 1308 aa18.41■□□□□ 0.54
RLIM-202ENST00000349225 GZF1Q9H116 711 aaPredicted RBP18.4■□□□□ 0.54
RLIM-202ENST00000349225 MAGI1Q96QZ7 1491 aaPredicted RBP18.4■□□□□ 0.54
RLIM-202ENST00000349225 ADGBQ8N7X0 1667 aa18.39■□□□□ 0.54
RLIM-202ENST00000349225 SPINK5Q9NQ38 1064 aaPredicted RBP18.39■□□□□ 0.53
RLIM-202ENST00000349225 DISP3Q9P2K9 1392 aa18.39■□□□□ 0.53
RLIM-202ENST00000349225 GOLGA6L3A6NEY3 463 aa18.38■□□□□ 0.53
RLIM-202ENST00000349225 CAMSAP2Q08AD1 1489 aa18.38■□□□□ 0.53
RLIM-202ENST00000349225 BCAR3O75815 825 aa18.37■□□□□ 0.53
RLIM-202ENST00000349225 TBC1D2Q9BYX2 928 aa18.37■□□□□ 0.53
RLIM-202ENST00000349225 CEP170Q5SW79 1584 aa18.37■□□□□ 0.53
RLIM-202ENST00000349225 EIF3AQ14152 1382 aaKnown RBP18.37■□□□□ 0.53
RLIM-202ENST00000349225 NBPF1Q3BBV0 1214 aa18.37■□□□□ 0.53
RLIM-202ENST00000349225 PANK3Q9H999 370 aa18.36■□□□□ 0.53
RLIM-202ENST00000349225 TRPM1Q7Z4N2 1603 aa18.36■□□□□ 0.53
RLIM-202ENST00000349225 COL17A1Q9UMD9 1497 aaPredicted RBP18.35■□□□□ 0.53
RLIM-202ENST00000349225 IQGAP2Q13576 1575 aa18.34■□□□□ 0.53
RLIM-202ENST00000349225 ADGRL2O95490 1459 aa18.34■□□□□ 0.53
RLIM-202ENST00000349225 KDM5DQ9BY66 1539 aa18.34■□□□□ 0.53
RLIM-202ENST00000349225 CROCC2H7BZ55 1655 aa18.34■□□□□ 0.53
RLIM-202ENST00000349225 BECN1Q14457 450 aa18.34■□□□□ 0.53
RLIM-202ENST00000349225 TESK2Q96S53 571 aa18.34■□□□□ 0.53
RLIM-202ENST00000349225 SLFN5Q08AF3 891 aa18.33■□□□□ 0.53
RLIM-202ENST00000349225 SPRYD3Q8NCJ5 442 aa18.33■□□□□ 0.53
RLIM-202ENST00000349225 MCM4P33991 863 aa18.33■□□□□ 0.52
RLIM-202ENST00000349225 GOLGA2Q08379 1002 aa18.33■□□□□ 0.52
RLIM-202ENST00000349225 TRMT2AQ8IZ69 625 aaKnown RBP18.33■□□□□ 0.52
RLIM-202ENST00000349225 ANKRD50Q9ULJ7 1429 aa18.31■□□□□ 0.52
RLIM-202ENST00000349225 NUP155O75694 1391 aa18.3■□□□□ 0.52
RLIM-202ENST00000349225 TBC1D32Q96NH3 1257 aa18.3■□□□□ 0.52
RLIM-202ENST00000349225 PRAG1Q86YV5 1406 aa18.3■□□□□ 0.52
RLIM-202ENST00000349225 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.29■□□□□ 0.52
RLIM-202ENST00000349225 SHROOM2Q13796 1616 aa18.29■□□□□ 0.52
RLIM-202ENST00000349225 NUP153P49790 1475 aaKnown RBP18.29■□□□□ 0.52
RLIM-202ENST00000349225 GRIN2AQ12879 1464 aa18.29■□□□□ 0.52
RLIM-202ENST00000349225 DMRT2Q9Y5R5 561 aa18.29■□□□□ 0.52
RLIM-202ENST00000349225 NUP160Q12769 1436 aa18.29■□□□□ 0.52
RLIM-202ENST00000349225 ESPNB1AK53 854 aa18.28■□□□□ 0.52
RLIM-202ENST00000349225 TRAK2O60296 914 aa18.26■□□□□ 0.51
RLIM-202ENST00000349225 SYNJ2O15056 1496 aa18.26■□□□□ 0.51
RLIM-202ENST00000349225 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
RLIM-202ENST00000349225 CLASP1Q7Z460 1538 aa18.26■□□□□ 0.51
RLIM-202ENST00000349225 PPP2R1AP30153 589 aa18.26■□□□□ 0.51
RLIM-202ENST00000349225 PRG4Q92954 1404 aaPredicted RBP18.26■□□□□ 0.51
RLIM-202ENST00000349225 KIAA0556O60303 1618 aa18.26■□□□□ 0.51
RLIM-202ENST00000349225 MAGI2Q86UL8 1455 aa18.26■□□□□ 0.51
RLIM-202ENST00000349225 CCDC146Q8IYE0 955 aa18.25■□□□□ 0.51
RLIM-202ENST00000349225 ZNF777Q9ULD5 760 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms