RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 KANK1Q14678 1352 aa13.24□□□□□ -0.29
SMG7-201ENST00000347615 MS4A1P11836 297 aa13.23□□□□□ -0.29
SMG7-201ENST00000347615 CADPSQ9ULU8 1353 aa13.23□□□□□ -0.29
SMG7-201ENST00000347615 SYNJ1O43426 1573 aa13.23□□□□□ -0.29
SMG7-201ENST00000347615 ZRSR1Q15695 479 aaKnown RBP13.22□□□□□ -0.29
SMG7-201ENST00000347615 NBPF8Q3BBV2 869 aa13.22□□□□□ -0.29
SMG7-201ENST00000347615 PMFBP1Q8TBY8 1022 aa13.22□□□□□ -0.29
SMG7-201ENST00000347615 PANK1Q8TE04 598 aa13.22□□□□□ -0.29
SMG7-201ENST00000347615 BRPF3Q9ULD4 1205 aa13.22□□□□□ -0.29
SMG7-201ENST00000347615 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
SMG7-201ENST00000347615 LRRC9Q6ZRR7 1453 aa13.21□□□□□ -0.29
SMG7-201ENST00000347615 FGD6Q6ZV73 1430 aa13.21□□□□□ -0.29
SMG7-201ENST00000347615 CENPQQ7L2Z9 268 aaPredicted RBP13.21□□□□□ -0.29
SMG7-201ENST00000347615 DRC7Q8IY82 874 aa13.21□□□□□ -0.3
SMG7-201ENST00000347615 PDE3BQ13370 1112 aa13.2□□□□□ -0.3
SMG7-201ENST00000347615 CNTLNQ9NXG0 1405 aa13.2□□□□□ -0.3
SMG7-201ENST00000347615 TRIM6-TRIM34B2RNG4 842 aa13.19□□□□□ -0.3
SMG7-201ENST00000347615 GBP4Q96PP9 640 aa13.19□□□□□ -0.3
SMG7-201ENST00000347615 ANKRD45Q5TZF3 282 aa13.19□□□□□ -0.3
SMG7-201ENST00000347615 ADAMTS8Q9UP79 889 aa13.19□□□□□ -0.3
SMG7-201ENST00000347615 IPO8O15397 1037 aaKnown RBP13.18□□□□□ -0.3
SMG7-201ENST00000347615 NFKBIBQ15653 356 aa13.18□□□□□ -0.3
SMG7-201ENST00000347615 CCDC144AA2RUR9 1427 aa13.18□□□□□ -0.3
SMG7-201ENST00000347615 FGD5Q6ZNL6 1462 aa13.18□□□□□ -0.3
SMG7-201ENST00000347615 GOLGA6L4A6NEF3 574 aa13.18□□□□□ -0.3
SMG7-201ENST00000347615 JPH4Q96JJ6 628 aa13.17□□□□□ -0.3
SMG7-201ENST00000347615 HAP1P54257 671 aaPredicted RBP13.17□□□□□ -0.3
SMG7-201ENST00000347615 HDGFL2Q7Z4V5 671 aaPredicted RBP13.17□□□□□ -0.3
SMG7-201ENST00000347615 RTF1Q92541 710 aaKnown RBP13.17□□□□□ -0.3
SMG7-201ENST00000347615 NBPF1Q3BBV0 1214 aa13.16□□□□□ -0.3
SMG7-201ENST00000347615 LTV1Q96GA3 475 aaPredicted RBP13.16□□□□□ -0.3
SMG7-201ENST00000347615 C11orf95C9JLR9 678 aaPredicted RBP13.16□□□□□ -0.3
SMG7-201ENST00000347615 NECTIN2Q92692 538 aa13.15□□□□□ -0.3
SMG7-201ENST00000347615 UACAQ9BZF9 1416 aa13.15□□□□□ -0.3
SMG7-201ENST00000347615 CCDC9Q9Y3X0 531 aaKnown RBP13.15□□□□□ -0.3
SMG7-201ENST00000347615 FANCD2Q9BXW9 1451 aa13.15□□□□□ -0.3
SMG7-201ENST00000347615 PDS5BQ9NTI5 1447 aa13.15□□□□□ -0.3
SMG7-201ENST00000347615 CARMIL2Q6F5E8 1435 aa13.14□□□□□ -0.31
SMG7-201ENST00000347615 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.14□□□□□ -0.31
SMG7-201ENST00000347615 FRAT2O75474 233 aaPredicted RBP13.14□□□□□ -0.31
SMG7-201ENST00000347615 EFCAB2Q5VUJ9 269 aa13.14□□□□□ -0.31
SMG7-201ENST00000347615 BCL11BQ9C0K0 894 aaPredicted RBP13.13□□□□□ -0.31
SMG7-201ENST00000347615 ZNF330Q9Y3S2 320 aaPredicted RBP13.13□□□□□ -0.31
SMG7-201ENST00000347615 CFTRP13569 1480 aa13.13□□□□□ -0.31
SMG7-201ENST00000347615 RRBP1Q9P2E9 1410 aaKnown RBP13.13□□□□□ -0.31
SMG7-201ENST00000347615 MCCP23508 829 aa13.13□□□□□ -0.31
SMG7-201ENST00000347615 CHMP4BQ9H444 224 aaKnown RBP13.13□□□□□ -0.31
SMG7-201ENST00000347615 SPAG9O60271 1321 aaKnown RBP13.13□□□□□ -0.31
SMG7-201ENST00000347615 BCAR3O75815 825 aa13.12□□□□□ -0.31
SMG7-201ENST00000347615 MYOM3Q5VTT5 1437 aa13.11□□□□□ -0.31
SMG7-201ENST00000347615 MINK1Q8N4C8 1332 aaPredicted RBP13.11□□□□□ -0.31
SMG7-201ENST00000347615 CALD1Q05682 793 aaKnown RBP13.11□□□□□ -0.31
SMG7-201ENST00000347615 NCOA2Q15596 1464 aa13.11□□□□□ -0.31
SMG7-201ENST00000347615 E9PSI1 815 aa13.11□□□□□ -0.31
SMG7-201ENST00000347615 RILPL2Q969X0 211 aa13.11□□□□□ -0.31
SMG7-201ENST00000347615 LNPKQ9C0E8 428 aa13.11□□□□□ -0.31
SMG7-201ENST00000347615 USP35Q9P2H5 1018 aa13.11□□□□□ -0.31
SMG7-201ENST00000347615 DDX49Q9Y6V7 483 aaKnown RBP13.1□□□□□ -0.31
SMG7-201ENST00000347615 WASHC2CQ9Y4E1 1318 aa13.1□□□□□ -0.31
SMG7-201ENST00000347615 TMEM132EQ6IEE7 984 aa13.09□□□□□ -0.31
SMG7-201ENST00000347615 VSIG10Q8N0Z9 540 aa13.09□□□□□ -0.31
SMG7-201ENST00000347615 EIF3AQ14152 1382 aaKnown RBP13.09□□□□□ -0.31
SMG7-201ENST00000347615 ZKSCAN2Q63HK3 967 aa13.09□□□□□ -0.31
SMG7-201ENST00000347615 KIAA1211Q6ZU35 1233 aa13.08□□□□□ -0.32
SMG7-201ENST00000347615 HMOX1P09601 288 aa13.08□□□□□ -0.32
SMG7-201ENST00000347615 PRDM2Q13029 1718 aa13.08□□□□□ -0.32
SMG7-201ENST00000347615 CHMP3Q9Y3E7 222 aa13.07□□□□□ -0.32
SMG7-201ENST00000347615 CHAF1AQ13111 956 aaPredicted RBP13.07□□□□□ -0.32
SMG7-201ENST00000347615 HSP90AA2PQ14568 343 aaPredicted RBP13.07□□□□□ -0.32
SMG7-201ENST00000347615 ZNF428Q96B54 188 aa13.06□□□□□ -0.32
SMG7-201ENST00000347615 AQRO60306 1485 aaKnown RBP eCLIP13.06□□□□□ -0.321e-6■■■■□ 20.5
SMG7-201ENST00000347615 C1orf115Q9H7X2 142 aa13.06□□□□□ -0.32
SMG7-201ENST00000347615 RIPK4P57078 832 aa13.05□□□□□ -0.32
SMG7-201ENST00000347615 GGNBP2Q9H3C7 697 aa13.05□□□□□ -0.32
SMG7-201ENST00000347615 C20orf194Q5TEA3 1177 aa13.05□□□□□ -0.32
SMG7-201ENST00000347615 PNISRQ8TF01 805 aaKnown RBP13.04□□□□□ -0.32
SMG7-201ENST00000347615 TERF2IPQ9NYB0 399 aa13.04□□□□□ -0.32
SMG7-201ENST00000347615 DZIP1LQ8IYY4 767 aaKnown RBP13.04□□□□□ -0.32
SMG7-201ENST00000347615 CABP2Q9NPB3 220 aa13.04□□□□□ -0.32
SMG7-201ENST00000347615 HSP90B1P14625 803 aaKnown RBP13.03□□□□□ -0.32
SMG7-201ENST00000347615 KIAA2012Q0VF49 1180 aa13.03□□□□□ -0.32
SMG7-201ENST00000347615 TSR2Q969E8 191 aaKnown RBP13.03□□□□□ -0.32
SMG7-201ENST00000347615 STK31Q9BXU1 1019 aa13.03□□□□□ -0.32
SMG7-201ENST00000347615 GAPVD1Q14C86 1478 aa13.02□□□□□ -0.32
SMG7-201ENST00000347615 CGNL1Q0VF96 1302 aa13.02□□□□□ -0.33
SMG7-201ENST00000347615 PPP2R1AP30153 589 aa13.01□□□□□ -0.33
SMG7-201ENST00000347615 BACH2Q9BYV9 841 aa13.01□□□□□ -0.33
SMG7-201ENST00000347615 C22orf23Q9BZE7 217 aa13.01□□□□□ -0.33
SMG7-201ENST00000347615 MCTP1Q6DN14 999 aa13.01□□□□□ -0.33
SMG7-201ENST00000347615 DDX11L8A8MPP1 907 aa13.01□□□□□ -0.33
SMG7-201ENST00000347615 CFAP70Q5T0N1 1121 aa13□□□□□ -0.33
SMG7-201ENST00000347615 MPNDQ8N594 471 aa13□□□□□ -0.33
SMG7-201ENST00000347615 NGEFQ8N5V2 710 aa13□□□□□ -0.33
SMG7-201ENST00000347615 FAM13BQ9NYF5 915 aa13□□□□□ -0.33
SMG7-201ENST00000347615 CASKIN1Q8WXD9 1431 aa12.99□□□□□ -0.33
SMG7-201ENST00000347615 ST18O60284 1047 aa12.99□□□□□ -0.33
SMG7-201ENST00000347615 MTHFSP49914 203 aa12.99□□□□□ -0.33
SMG7-201ENST00000347615 ANKRD50Q9ULJ7 1429 aa12.99□□□□□ -0.33
SMG7-201ENST00000347615 EIF2S2P20042 333 aaKnown RBP12.99□□□□□ -0.33
SMG7-201ENST00000347615 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms