RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 CFAP74Q9C0B2 1584 aa19.41■□□□□ 0.7
CDC42-202ENST00000344548 GLI2P10070 1586 aa19.41■□□□□ 0.7
CDC42-202ENST00000344548 KDM5CP41229 1560 aa19.41■□□□□ 0.7
CDC42-202ENST00000344548 KIF3BO15066 747 aa19.4■□□□□ 0.7
CDC42-202ENST00000344548 NEO1Q92859 1461 aa19.4■□□□□ 0.7
CDC42-202ENST00000344548 DHX29Q7Z478 1369 aaKnown RBP19.4■□□□□ 0.7
CDC42-202ENST00000344548 MIER1Q8N108 512 aa19.38■□□□□ 0.69
CDC42-202ENST00000344548 MLH3Q9UHC1 1453 aa19.36■□□□□ 0.69
CDC42-202ENST00000344548 DEPDC5O75140 1603 aa19.36■□□□□ 0.69
CDC42-202ENST00000344548 TSPOAP1O95153 1857 aa19.35■□□□□ 0.69
CDC42-202ENST00000344548 MROH1Q8NDA8 1641 aa19.34■□□□□ 0.69
CDC42-202ENST00000344548 FRMPD1Q5SYB0 1578 aa19.34■□□□□ 0.69
CDC42-202ENST00000344548 HECW2Q9P2P5 1572 aa19.33■□□□□ 0.69
CDC42-202ENST00000344548 A2MP01023 1474 aa19.33■□□□□ 0.68
CDC42-202ENST00000344548 PPRC1Q5VV67 1664 aaKnown RBP19.33■□□□□ 0.68
CDC42-202ENST00000344548 ABCA6Q8N139 1617 aa19.33■□□□□ 0.68
CDC42-202ENST00000344548 RICTORQ6R327 1708 aa19.32■□□□□ 0.68
CDC42-202ENST00000344548 E9PCH4 1651 aa19.32■□□□□ 0.68
CDC42-202ENST00000344548 ZNF326Q5BKZ1 582 aaKnown RBP19.31■□□□□ 0.68
CDC42-202ENST00000344548 CCDC144AA2RUR9 1427 aa19.31■□□□□ 0.68
CDC42-202ENST00000344548 VWDEQ8N2E2 1590 aa19.3■□□□□ 0.68
CDC42-202ENST00000344548 HSPA5P11021 654 aaKnown RBP19.3■□□□□ 0.68
CDC42-202ENST00000344548 KDM2AQ9Y2K7 1162 aa19.3■□□□□ 0.68
CDC42-202ENST00000344548 EIF2AK4Q9P2K8 1649 aaKnown RBP19.29■□□□□ 0.68
CDC42-202ENST00000344548 YEATS2Q9ULM3 1422 aa19.29■□□□□ 0.68
CDC42-202ENST00000344548 RGL3Q3MIN7 710 aa19.28■□□□□ 0.68
CDC42-202ENST00000344548 PRDM15P57071 1507 aaPredicted RBP19.28■□□□□ 0.68
CDC42-202ENST00000344548 DCAF11Q8TEB1 546 aa19.28■□□□□ 0.68
CDC42-202ENST00000344548 DDX10Q13206 875 aaKnown RBP19.27■□□□□ 0.68
CDC42-202ENST00000344548 KIF13AQ9H1H9 1805 aa19.27■□□□□ 0.67
CDC42-202ENST00000344548 ATP10AO60312 1499 aa19.27■□□□□ 0.67
CDC42-202ENST00000344548 GGT6Q6P531 493 aa19.26■□□□□ 0.67
CDC42-202ENST00000344548 DIP2CQ9Y2E4 1556 aa19.25■□□□□ 0.67
CDC42-202ENST00000344548 TET3O43151 1660 aa19.24■□□□□ 0.67
CDC42-202ENST00000344548 KANK1Q14678 1352 aa19.23■□□□□ 0.67
CDC42-202ENST00000344548 EIF4G2P78344 907 aaKnown RBP eCLIP19.23■□□□□ 0.67
CDC42-202ENST00000344548 COL17A1Q9UMD9 1497 aaPredicted RBP19.22■□□□□ 0.67
CDC42-202ENST00000344548 UHRF1BP1Q6BDS2 1440 aa19.22■□□□□ 0.67
CDC42-202ENST00000344548 C11orf95C9JLR9 678 aaPredicted RBP19.22■□□□□ 0.67
CDC42-202ENST00000344548 PTPRTO14522 1441 aa19.22■□□□□ 0.67
CDC42-202ENST00000344548 RNF17Q9BXT8 1623 aaKnown RBP19.21■□□□□ 0.67
CDC42-202ENST00000344548 SPATA31E1Q6ZUB1 1445 aa19.2■□□□□ 0.66
CDC42-202ENST00000344548 CEP152O94986 1710 aa19.2■□□□□ 0.66
CDC42-202ENST00000344548 SPHKAPQ2M3C7 1700 aa19.18■□□□□ 0.66
CDC42-202ENST00000344548 TRPM2O94759 1503 aa19.18■□□□□ 0.66
CDC42-202ENST00000344548 WASHC2AQ641Q2 1341 aa19.18■□□□□ 0.66
CDC42-202ENST00000344548 UGGT1Q9NYU2 1555 aa19.18■□□□□ 0.66
CDC42-202ENST00000344548 CLTCL1P53675 1640 aa19.17■□□□□ 0.66
CDC42-202ENST00000344548 EFCAB6Q5THR3 1501 aa19.17■□□□□ 0.66
CDC42-202ENST00000344548 BCORL1Q5H9F3 1711 aa19.16■□□□□ 0.66
CDC42-202ENST00000344548 ZMYM4Q5VZL5 1548 aa19.15■□□□□ 0.66
CDC42-202ENST00000344548 LMTK2Q8IWU2 1503 aa19.15■□□□□ 0.66
CDC42-202ENST00000344548 RALGAPBQ86X10 1494 aa19.15■□□□□ 0.66
CDC42-202ENST00000344548 PRAG1Q86YV5 1406 aa19.14■□□□□ 0.65
CDC42-202ENST00000344548 CFAP65Q6ZU64 1925 aaKnown RBP19.14■□□□□ 0.65
CDC42-202ENST00000344548 NPATQ14207 1427 aa19.14■□□□□ 0.65
CDC42-202ENST00000344548 WASHC2CQ9Y4E1 1318 aa19.13■□□□□ 0.65
CDC42-202ENST00000344548 NBPF1Q3BBV0 1214 aa19.13■□□□□ 0.65
CDC42-202ENST00000344548 ABCC3O15438 1527 aa19.12■□□□□ 0.65
CDC42-202ENST00000344548 USP47Q96K76 1375 aa19.12■□□□□ 0.65
CDC42-202ENST00000344548 CARD11Q9BXL7 1154 aa19.11■□□□□ 0.65
CDC42-202ENST00000344548 SIGLEC1Q9BZZ2 1709 aa19.1■□□□□ 0.65
CDC42-202ENST00000344548 TRPM1Q7Z4N2 1603 aa19.08■□□□□ 0.65
CDC42-202ENST00000344548 ROCK2O75116 1388 aaKnown RBP19.07■□□□□ 0.64
CDC42-202ENST00000344548 YTHDC1Q96MU7 727 aaKnown RBP19.07■□□□□ 0.64
CDC42-202ENST00000344548 CCDC7Q96M83 1385 aa19.06■□□□□ 0.64
CDC42-202ENST00000344548 CAMSAP1Q5T5Y3 1602 aa19.05■□□□□ 0.64
CDC42-202ENST00000344548 KIF7Q2M1P5 1343 aa19.05■□□□□ 0.64
CDC42-202ENST00000344548 ST20-MTHFSA0A0A6YYL1 179 aa19.04■□□□□ 0.64
CDC42-202ENST00000344548 MROH2AA6NES4 1674 aa19.02■□□□□ 0.64
CDC42-202ENST00000344548 MADDQ8WXG6 1647 aa19■□□□□ 0.63
CDC42-202ENST00000344548 NOS1P29475 1434 aa19■□□□□ 0.63
CDC42-202ENST00000344548 GPRASP1Q5JY77 1395 aa19■□□□□ 0.63
CDC42-202ENST00000344548 MLECQ14165 292 aa18.99■□□□□ 0.63
CDC42-202ENST00000344548 CHGAP10645 457 aaKnown RBP18.99■□□□□ 0.63
CDC42-202ENST00000344548 SYNMO15061 1565 aa18.99■□□□□ 0.63
CDC42-202ENST00000344548 ADGRF5Q8IZF2 1346 aa18.98■□□□□ 0.63
CDC42-202ENST00000344548 FBXO31Q5XUX0 539 aaPredicted RBP18.98■□□□□ 0.63
CDC42-202ENST00000344548 KIF1BO60333 1816 aa18.98■□□□□ 0.63
CDC42-202ENST00000344548 CNTLNQ9NXG0 1405 aa18.98■□□□□ 0.63
CDC42-202ENST00000344548 REREQ9P2R6 1566 aa18.98■□□□□ 0.63
CDC42-202ENST00000344548 ARHGAP31Q2M1Z3 1444 aa18.96■□□□□ 0.63
CDC42-202ENST00000344548 AGLP35573 1532 aa18.96■□□□□ 0.63
CDC42-202ENST00000344548 ARHGEF40Q8TER5 1519 aa18.96■□□□□ 0.63
CDC42-202ENST00000344548 ADGRB3O60242 1522 aa18.96■□□□□ 0.63
CDC42-202ENST00000344548 POLR1AO95602 1720 aaPredicted RBP18.96■□□□□ 0.63
CDC42-202ENST00000344548 NEURL4Q96JN8 1562 aa18.96■□□□□ 0.62
CDC42-202ENST00000344548 TRHP20396 242 aaPredicted RBP18.95■□□□□ 0.62
CDC42-202ENST00000344548 ZC3H13Q5T200 1668 aaKnown RBP18.95■□□□□ 0.62
CDC42-202ENST00000344548 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
CDC42-202ENST00000344548 IDI1Q13907 227 aa18.94■□□□□ 0.62
CDC42-202ENST00000344548 IFT172Q9UG01 1749 aa18.93■□□□□ 0.62
CDC42-202ENST00000344548 ANP32CO43423 234 aa18.93■□□□□ 0.62
CDC42-202ENST00000344548 CFAP70Q5T0N1 1121 aa18.93■□□□□ 0.62
CDC42-202ENST00000344548 PIK3C2BO00750 1634 aa18.92■□□□□ 0.62
CDC42-202ENST00000344548 NUTM2DQ5VT03 806 aaPredicted RBP18.91■□□□□ 0.62
CDC42-202ENST00000344548 LAMC1P11047 1609 aa18.9■□□□□ 0.62
CDC42-202ENST00000344548 TESK2Q96S53 571 aa18.9■□□□□ 0.62
CDC42-202ENST00000344548 CLTCQ00610 1675 aaKnown RBP18.9■□□□□ 0.62
CDC42-202ENST00000344548 PREX1Q8TCU6 1659 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms