RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 ARHGEF12Q9NZN5 1544 aa32.41■■■□□ 2.78
NELFB-201ENST00000343053 NBPF1Q3BBV0 1214 aa32.39■■■□□ 2.78
NELFB-201ENST00000343053 SAMD9LQ8IVG5 1584 aa32.36■■■□□ 2.77
NELFB-201ENST00000343053 KDM5DQ9BY66 1539 aa32.36■■■□□ 2.77
NELFB-201ENST00000343053 FAM135AQ9P2D6 1515 aa32.36■■■□□ 2.77
NELFB-201ENST00000343053 MYBBP1AQ9BQG0 1328 aaKnown RBP32.35■■■□□ 2.77
NELFB-201ENST00000343053 PTPRGP23470 1445 aa32.34■■■□□ 2.77
NELFB-201ENST00000343053 CDC42BPBQ9Y5S2 1711 aa32.32■■■□□ 2.76
NELFB-201ENST00000343053 CCDC141Q6ZP82 1450 aa32.32■■■□□ 2.76
NELFB-201ENST00000343053 CCDC144AA2RUR9 1427 aa32.31■■■□□ 2.76
NELFB-201ENST00000343053 RNF123Q5XPI4 1314 aa32.3■■■□□ 2.76
NELFB-201ENST00000343053 SYCP2Q9BX26 1530 aa32.29■■■□□ 2.76
NELFB-201ENST00000343053 ARHGEF5Q12774 1597 aa32.27■■■□□ 2.76
NELFB-201ENST00000343053 CC2D1BQ5T0F9 858 aaKnown RBP32.27■■■□□ 2.76
NELFB-201ENST00000343053 LRPPRCP42704 1394 aaKnown RBP32.26■■■□□ 2.76
NELFB-201ENST00000343053 BRD4O60885 1362 aaPredicted RBP32.26■■■□□ 2.75
NELFB-201ENST00000343053 RALBP1Q15311 655 aa32.25■■■□□ 2.75
NELFB-201ENST00000343053 PRAG1Q86YV5 1406 aa32.25■■■□□ 2.75
NELFB-201ENST00000343053 E9PCH4 1651 aa32.25■■■□□ 2.75
NELFB-201ENST00000343053 PREX2Q70Z35 1606 aa32.23■■■□□ 2.75
NELFB-201ENST00000343053 ARHGAP5Q13017 1502 aa32.22■■■□□ 2.75
NELFB-201ENST00000343053 TRPM1Q7Z4N2 1603 aa32.21■■■□□ 2.75
NELFB-201ENST00000343053 PAK3O75914 559 aaPredicted RBP32.21■■■□□ 2.75
NELFB-201ENST00000343053 KTN1Q86UP2 1357 aaKnown RBP32.2■■■□□ 2.75
NELFB-201ENST00000343053 TTC37Q6PGP7 1564 aa32.2■■■□□ 2.75
NELFB-201ENST00000343053 EXOC6Q8TAG9 804 aa32.19■■■□□ 2.74
NELFB-201ENST00000343053 PLA2R1Q13018 1463 aa32.19■■■□□ 2.74
NELFB-201ENST00000343053 DISP3Q9P2K9 1392 aa32.18■■■□□ 2.74
NELFB-201ENST00000343053 CDCA7LQ96GN5 454 aa32.17■■■□□ 2.74
NELFB-201ENST00000343053 A2MP01023 1474 aa32.17■■■□□ 2.74
NELFB-201ENST00000343053 NLRP13Q86W25 1043 aa32.17■■■□□ 2.74
NELFB-201ENST00000343053 RRP1P56182 461 aaKnown RBP32.16■■■□□ 2.74
NELFB-201ENST00000343053 PLEKHH2Q8IVE3 1493 aa32.15■■■□□ 2.74
NELFB-201ENST00000343053 NBR1Q14596 966 aa32.14■■■□□ 2.74
NELFB-201ENST00000343053 NOP58Q9Y2X3 529 aaKnown RBP32.13■■■□□ 2.73
NELFB-201ENST00000343053 RCAN3Q9UKA8 241 aa32.13■■■□□ 2.73
NELFB-201ENST00000343053 PARD3Q8TEW0 1356 aa32.12■■■□□ 2.73
NELFB-201ENST00000343053 PER1O15534 1290 aaPredicted RBP32.11■■■□□ 2.73
NELFB-201ENST00000343053 PANK3Q9H999 370 aa32.1■■■□□ 2.73
NELFB-201ENST00000343053 TESK2Q96S53 571 aa32.08■■■□□ 2.73
NELFB-201ENST00000343053 MYO5CQ9NQX4 1742 aa32.08■■■□□ 2.73
NELFB-201ENST00000343053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.08■■■□□ 2.734e-20■■■□□ 18.9
NELFB-201ENST00000343053 PLIN1O60240 522 aa32.07■■■□□ 2.72
NELFB-201ENST00000343053 COL17A1Q9UMD9 1497 aaPredicted RBP32.05■■■□□ 2.72
NELFB-201ENST00000343053 RSPH4AQ5TD94 716 aa32.04■■■□□ 2.72
NELFB-201ENST00000343053 ERCC6L2Q5T890 1561 aa32.04■■■□□ 2.72
NELFB-201ENST00000343053 UNC13BO14795 1591 aa32.04■■■□□ 2.72
NELFB-201ENST00000343053 NPM2Q86SE8 214 aaKnown RBP32.03■■■□□ 2.72
NELFB-201ENST00000343053 CHD1O14646 1710 aa32.03■■■□□ 2.72
NELFB-201ENST00000343053 ANP32AP39687 249 aaKnown RBP32.03■■■□□ 2.72
NELFB-201ENST00000343053 ERBINQ96RT1 1412 aa32.01■■■□□ 2.71
NELFB-201ENST00000343053 SKAP1Q86WV1 359 aa31.99■■■□□ 2.71
NELFB-201ENST00000343053 GPRASP1Q5JY77 1395 aa31.99■■■□□ 2.71
NELFB-201ENST00000343053 PRDM15P57071 1507 aaPredicted RBP31.98■■■□□ 2.71
NELFB-201ENST00000343053 TMF1P82094 1093 aa31.95■■■□□ 2.71
NELFB-201ENST00000343053 IQGAP3Q86VI3 1631 aa31.95■■■□□ 2.7
NELFB-201ENST00000343053 IPO9Q96P70 1041 aaKnown RBP31.93■■■□□ 2.7
NELFB-201ENST00000343053 MAST1Q9Y2H9 1570 aa31.92■■■□□ 2.7
NELFB-201ENST00000343053 PLXNC1O60486 1568 aa31.88■■■□□ 2.69
NELFB-201ENST00000343053 DEKP35659 375 aaKnown RBP31.88■■■□□ 2.69
NELFB-201ENST00000343053 PDE3BQ13370 1112 aa31.87■■■□□ 2.69
NELFB-201ENST00000343053 ZBTB47Q9UFB7 747 aaPredicted RBP31.86■■■□□ 2.69
NELFB-201ENST00000343053 DUOX2Q9NRD8 1548 aa31.86■■■□□ 2.69
NELFB-201ENST00000343053 ADAMTS8Q9UP79 889 aa31.86■■■□□ 2.69
NELFB-201ENST00000343053 CRBNQ96SW2 442 aa31.84■■■□□ 2.69
NELFB-201ENST00000343053 EIF2AK4Q9P2K8 1649 aaKnown RBP31.84■■■□□ 2.69
NELFB-201ENST00000343053 TRAPPC8Q9Y2L5 1435 aa31.84■■■□□ 2.69
NELFB-201ENST00000343053 ABCC2Q92887 1545 aa31.83■■■□□ 2.69
NELFB-201ENST00000343053 BLMP54132 1417 aaPredicted RBP31.82■■■□□ 2.68
NELFB-201ENST00000343053 LAMC1P11047 1609 aa31.82■■■□□ 2.68
NELFB-201ENST00000343053 AFAP1Q8N556 730 aa31.82■■■□□ 2.68
NELFB-201ENST00000343053 C20orf194Q5TEA3 1177 aa31.81■■■□□ 2.68
NELFB-201ENST00000343053 MAGI2Q86UL8 1455 aa31.8■■■□□ 2.68
NELFB-201ENST00000343053 PDE4AP27815 886 aa31.78■■■□□ 2.68
NELFB-201ENST00000343053 EFCAB2Q5VUJ9 269 aa31.78■■■□□ 2.68
NELFB-201ENST00000343053 KNSTRNQ9Y448 316 aa31.78■■■□□ 2.68
NELFB-201ENST00000343053 WASHC2CQ9Y4E1 1318 aa31.77■■■□□ 2.68
NELFB-201ENST00000343053 SHROOM2Q13796 1616 aa31.75■■■□□ 2.67
NELFB-201ENST00000343053 RNF17Q9BXT8 1623 aaKnown RBP31.74■■■□□ 2.67
NELFB-201ENST00000343053 WDR7Q9Y4E6 1490 aa31.74■■■□□ 2.67
NELFB-201ENST00000343053 TCERG1O14776 1098 aaKnown RBP31.74■■■□□ 2.67
NELFB-201ENST00000343053 PPP2R1AP30153 589 aa31.74■■■□□ 2.67
NELFB-201ENST00000343053 PLCH2O75038 1416 aa31.74■■■□□ 2.67
NELFB-201ENST00000343053 WDR43Q15061 677 aaKnown RBP eCLIP31.73■■■□□ 2.67
NELFB-201ENST00000343053 MYT1LQ9UL68 1186 aa31.73■■■□□ 2.67
NELFB-201ENST00000343053 SPAG9O60271 1321 aaKnown RBP31.72■■■□□ 2.67
NELFB-201ENST00000343053 ATP10AO60312 1499 aa31.72■■■□□ 2.67
NELFB-201ENST00000343053 PLEKHH1Q9ULM0 1364 aa31.71■■■□□ 2.67
NELFB-201ENST00000343053 ZCCHC11Q5TAX3 1644 aaKnown RBP31.71■■■□□ 2.67
NELFB-201ENST00000343053 MADDQ8WXG6 1647 aa31.7■■■□□ 2.67
NELFB-201ENST00000343053 CCDC146Q8IYE0 955 aa31.7■■■□□ 2.67
NELFB-201ENST00000343053 ZMYM4Q5VZL5 1548 aa31.7■■■□□ 2.67
NELFB-201ENST00000343053 ABCC1P33527 1531 aa31.69■■■□□ 2.66
NELFB-201ENST00000343053 LAS1LQ9Y4W2 734 aaKnown RBP31.68■■■□□ 2.66
NELFB-201ENST00000343053 BACH2Q9BYV9 841 aa31.67■■■□□ 2.66
NELFB-201ENST00000343053 AMER1Q5JTC6 1135 aaPredicted RBP31.67■■■□□ 2.66
NELFB-201ENST00000343053 IQGAP1P46940 1657 aa31.63■■■□□ 2.65
NELFB-201ENST00000343053 RTL5Q5HYW3 569 aaPredicted RBP31.62■■■□□ 2.65
NELFB-201ENST00000343053 CLTCL1P53675 1640 aa31.62■■■□□ 2.65
NELFB-201ENST00000343053 DUSP27Q5VZP5 1158 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms