RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 RPRD2Q5VT52 1461 aaKnown RBP20.76■□□□□ 0.91
PBX3-201ENST00000342287 UNC13BO14795 1591 aa20.75■□□□□ 0.91
PBX3-201ENST00000342287 FAM135AQ9P2D6 1515 aa20.74■□□□□ 0.91
PBX3-201ENST00000342287 MAP3K4Q9Y6R4 1608 aa20.74■□□□□ 0.91
PBX3-201ENST00000342287 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.74■□□□□ 0.91
PBX3-201ENST00000342287 FAM69CQ0P6D2 419 aa20.74■□□□□ 0.91
PBX3-201ENST00000342287 POGZQ7Z3K3 1410 aa20.73■□□□□ 0.91
PBX3-201ENST00000342287 MIER1Q8N108 512 aa20.71■□□□□ 0.91
PBX3-201ENST00000342287 MAGI2Q86UL8 1455 aa20.7■□□□□ 0.9
PBX3-201ENST00000342287 L3MBTL2Q969R5 705 aa20.7■□□□□ 0.9
PBX3-201ENST00000342287 DHX29Q7Z478 1369 aaKnown RBP20.69■□□□□ 0.9
PBX3-201ENST00000342287 DIP2BQ9P265 1576 aa20.69■□□□□ 0.9
PBX3-201ENST00000342287 KDM5CP41229 1560 aa20.68■□□□□ 0.9
PBX3-201ENST00000342287 IQGAP3Q86VI3 1631 aa20.68■□□□□ 0.9
PBX3-201ENST00000342287 MLH3Q9UHC1 1453 aa20.67■□□□□ 0.9
PBX3-201ENST00000342287 KIDINS220Q9ULH0 1771 aa20.66■□□□□ 0.9
PBX3-201ENST00000342287 RAPGEF3O95398 923 aa20.64■□□□□ 0.9
PBX3-201ENST00000342287 KIF3BO15066 747 aa20.63■□□□□ 0.89
PBX3-201ENST00000342287 TEX14Q8IWB6 1497 aa20.62■□□□□ 0.89
PBX3-201ENST00000342287 HECW2Q9P2P5 1572 aa20.62■□□□□ 0.89
PBX3-201ENST00000342287 EIF2AK4Q9P2K8 1649 aaKnown RBP20.61■□□□□ 0.89
PBX3-201ENST00000342287 A2MP01023 1474 aa20.6■□□□□ 0.89
PBX3-201ENST00000342287 KANK1Q14678 1352 aa20.6■□□□□ 0.89
PBX3-201ENST00000342287 DEPDC5O75140 1603 aa20.6■□□□□ 0.89
PBX3-201ENST00000342287 CCDC144AA2RUR9 1427 aa20.56■□□□□ 0.88
PBX3-201ENST00000342287 ATP10AO60312 1499 aa20.55■□□□□ 0.88
PBX3-201ENST00000342287 PLA2R1Q13018 1463 aa20.55■□□□□ 0.88
PBX3-201ENST00000342287 RICTORQ6R327 1708 aa20.55■□□□□ 0.88
PBX3-201ENST00000342287 VWDEQ8N2E2 1590 aa20.54■□□□□ 0.88
PBX3-201ENST00000342287 PRDM15P57071 1507 aaPredicted RBP20.53■□□□□ 0.88
PBX3-201ENST00000342287 NBPF8Q3BBV2 869 aa20.52■□□□□ 0.88
PBX3-201ENST00000342287 PPRC1Q5VV67 1664 aaKnown RBP20.52■□□□□ 0.88
PBX3-201ENST00000342287 ABCA6Q8N139 1617 aa20.52■□□□□ 0.88
PBX3-201ENST00000342287 TSPOAP1O95153 1857 aa20.51■□□□□ 0.87
PBX3-201ENST00000342287 FRMPD1Q5SYB0 1578 aa20.51■□□□□ 0.87
PBX3-201ENST00000342287 MROH1Q8NDA8 1641 aa20.5■□□□□ 0.87
PBX3-201ENST00000342287 TET3O43151 1660 aa20.49■□□□□ 0.87
PBX3-201ENST00000342287 DIP2CQ9Y2E4 1556 aa20.48■□□□□ 0.87
PBX3-201ENST00000342287 E9PCH4 1651 aa20.48■□□□□ 0.87
PBX3-201ENST00000342287 RNF17Q9BXT8 1623 aaKnown RBP20.48■□□□□ 0.87
PBX3-201ENST00000342287 KIF13AQ9H1H9 1805 aa20.48■□□□□ 0.87
PBX3-201ENST00000342287 HIRIP3Q9BW71 556 aaPredicted RBP20.47■□□□□ 0.87
PBX3-201ENST00000342287 ZMYM4Q5VZL5 1548 aa20.47■□□□□ 0.87
PBX3-201ENST00000342287 GGT6Q6P531 493 aa20.46■□□□□ 0.87
PBX3-201ENST00000342287 BCORL1Q5H9F3 1711 aa20.46■□□□□ 0.87
PBX3-201ENST00000342287 PTPRTO14522 1441 aa20.46■□□□□ 0.87
PBX3-201ENST00000342287 YEATS2Q9ULM3 1422 aa20.46■□□□□ 0.87
PBX3-201ENST00000342287 EIF4G2P78344 907 aaKnown RBP eCLIP20.46■□□□□ 0.87
PBX3-201ENST00000342287 DCAF11Q8TEB1 546 aa20.45■□□□□ 0.86
PBX3-201ENST00000342287 UHRF1BP1Q6BDS2 1440 aa20.45■□□□□ 0.86
PBX3-201ENST00000342287 LMTK2Q8IWU2 1503 aa20.44■□□□□ 0.86
PBX3-201ENST00000342287 SALL2Q9Y467 1007 aaPredicted RBP20.43■□□□□ 0.86
PBX3-201ENST00000342287 ZNF326Q5BKZ1 582 aaKnown RBP20.43■□□□□ 0.86
PBX3-201ENST00000342287 HSPA5P11021 654 aaKnown RBP20.42■□□□□ 0.86
PBX3-201ENST00000342287 KDM2AQ9Y2K7 1162 aa20.42■□□□□ 0.86
PBX3-201ENST00000342287 TRPM2O94759 1503 aa20.42■□□□□ 0.86
PBX3-201ENST00000342287 RGL3Q3MIN7 710 aa20.42■□□□□ 0.86
PBX3-201ENST00000342287 CCDC136Q96JN2 1154 aa20.41■□□□□ 0.86
PBX3-201ENST00000342287 UBE2Q2Q8WVN8 375 aa20.4■□□□□ 0.86
PBX3-201ENST00000342287 RBM19Q9Y4C8 960 aaKnown RBP20.4■□□□□ 0.86
PBX3-201ENST00000342287 EFCAB6Q5THR3 1501 aa20.4■□□□□ 0.86
PBX3-201ENST00000342287 WASHC2CQ9Y4E1 1318 aa20.4■□□□□ 0.86
PBX3-201ENST00000342287 SPHKAPQ2M3C7 1700 aa20.39■□□□□ 0.85
PBX3-201ENST00000342287 BCANQ96GW7 911 aa20.38■□□□□ 0.85
PBX3-201ENST00000342287 SPATA31E1Q6ZUB1 1445 aa20.36■□□□□ 0.85
PBX3-201ENST00000342287 CEP152O94986 1710 aa20.36■□□□□ 0.85
PBX3-201ENST00000342287 COL17A1Q9UMD9 1497 aaPredicted RBP20.35■□□□□ 0.85
PBX3-201ENST00000342287 ABCC3O15438 1527 aa20.35■□□□□ 0.85
PBX3-201ENST00000342287 RALGAPBQ86X10 1494 aa20.35■□□□□ 0.85
PBX3-201ENST00000342287 DDX10Q13206 875 aaKnown RBP20.34■□□□□ 0.85
PBX3-201ENST00000342287 CLTCL1P53675 1640 aa20.32■□□□□ 0.84
PBX3-201ENST00000342287 PRAG1Q86YV5 1406 aa20.32■□□□□ 0.84
PBX3-201ENST00000342287 MSH5O43196 834 aa20.32■□□□□ 0.84
PBX3-201ENST00000342287 NPATQ14207 1427 aa20.32■□□□□ 0.84
PBX3-201ENST00000342287 REREQ9P2R6 1566 aa20.32■□□□□ 0.84
PBX3-201ENST00000342287 EIF5BO60841 1220 aaKnown RBP20.31■□□□□ 0.84
PBX3-201ENST00000342287 STAC3Q96MF2 364 aa20.31■□□□□ 0.84
PBX3-201ENST00000342287 CARD11Q9BXL7 1154 aa20.3■□□□□ 0.84
PBX3-201ENST00000342287 DEKP35659 375 aaKnown RBP20.29■□□□□ 0.84
PBX3-201ENST00000342287 USP47Q96K76 1375 aa20.28■□□□□ 0.84
PBX3-201ENST00000342287 AGLP35573 1532 aa20.28■□□□□ 0.84
PBX3-201ENST00000342287 NEURL4Q96JN8 1562 aa20.28■□□□□ 0.84
PBX3-201ENST00000342287 PPP6R1Q9UPN7 881 aa20.27■□□□□ 0.84
PBX3-201ENST00000342287 ARHGAP31Q2M1Z3 1444 aa20.27■□□□□ 0.84
PBX3-201ENST00000342287 CNTLNQ9NXG0 1405 aa20.27■□□□□ 0.84
PBX3-201ENST00000342287 CAMSAP1Q5T5Y3 1602 aa20.27■□□□□ 0.84
PBX3-201ENST00000342287 ZC3H13Q5T200 1668 aaKnown RBP20.27■□□□□ 0.84
PBX3-201ENST00000342287 ROCK2O75116 1388 aaKnown RBP20.27■□□□□ 0.83
PBX3-201ENST00000342287 WASHC2AQ641Q2 1341 aa20.26■□□□□ 0.83
PBX3-201ENST00000342287 UGGT1Q9NYU2 1555 aa20.24■□□□□ 0.83
PBX3-201ENST00000342287 ARHGEF40Q8TER5 1519 aa20.24■□□□□ 0.83
PBX3-201ENST00000342287 TRHP20396 242 aaPredicted RBP20.24■□□□□ 0.83
PBX3-201ENST00000342287 DNAJC5Q9H3Z4 198 aa20.23■□□□□ 0.83
PBX3-201ENST00000342287 TRPM1Q7Z4N2 1603 aa20.23■□□□□ 0.83
PBX3-201ENST00000342287 NOS1P29475 1434 aa20.23■□□□□ 0.83
PBX3-201ENST00000342287 C11orf95C9JLR9 678 aaPredicted RBP20.21■□□□□ 0.83
PBX3-201ENST00000342287 GPRASP1Q5JY77 1395 aa20.21■□□□□ 0.83
PBX3-201ENST00000342287 NBPF1Q3BBV0 1214 aa20.21■□□□□ 0.83
PBX3-201ENST00000342287 KIF1BO60333 1816 aa20.2■□□□□ 0.82
PBX3-201ENST00000342287 CCDC7Q96M83 1385 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms