RNA–Protein interactions for RNA: ENST00000340857.3

H1F0-201, Transcript of H1 histone family member 0, humanhuman

APPRIS P1 BASIC

Gene H1F0, Length 2,344 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H1F0-201ENST00000340857 COL17A1Q9UMD9 1497 aaPredicted RBP22.49■■□□□ 1.19
H1F0-201ENST00000340857 TSPY4P0CV99 314 aa22.48■■□□□ 1.19
H1F0-201ENST00000340857 TSPY10P0CW01 314 aa22.48■■□□□ 1.19
H1F0-201ENST00000340857 SPATA31E1Q6ZUB1 1445 aa22.47■■□□□ 1.19
H1F0-201ENST00000340857 SLC4A1APQ9BWU0 796 aaKnown RBP22.46■■□□□ 1.19
H1F0-201ENST00000340857 C9orf84Q5VXU9 1444 aa22.45■■□□□ 1.18
H1F0-201ENST00000340857 POGZQ7Z3K3 1410 aa22.45■■□□□ 1.18
H1F0-201ENST00000340857 ADGBQ8N7X0 1667 aa22.43■■□□□ 1.18
H1F0-201ENST00000340857 IRX6P78412 446 aaPredicted RBP22.42■■□□□ 1.18
H1F0-201ENST00000340857 CROCC2H7BZ55 1655 aa22.42■■□□□ 1.18
H1F0-201ENST00000340857 ZNF518AQ6AHZ1 1483 aa22.42■■□□□ 1.18
H1F0-201ENST00000340857 SPAG9O60271 1321 aaKnown RBP22.42■■□□□ 1.18
H1F0-201ENST00000340857 KIF7Q2M1P5 1343 aa22.42■■□□□ 1.18
H1F0-201ENST00000340857 PZPP20742 1482 aa22.4■■□□□ 1.18
H1F0-201ENST00000340857 SHANK2Q9UPX8 1470 aa22.4■■□□□ 1.18
H1F0-201ENST00000340857 ERICH6BQ5W0A0 696 aa22.4■■□□□ 1.18
H1F0-201ENST00000340857 MRS2Q9HD23 443 aa22.39■■□□□ 1.17
H1F0-201ENST00000340857 FRMPD1Q5SYB0 1578 aa22.38■■□□□ 1.17
H1F0-201ENST00000340857 POLR1AO95602 1720 aaPredicted RBP22.38■■□□□ 1.17
H1F0-201ENST00000340857 FAM9BQ8IZU0 186 aa22.37■■□□□ 1.17
H1F0-201ENST00000340857 MYT1LQ9UL68 1186 aa22.37■■□□□ 1.17
H1F0-201ENST00000340857 RICTORQ6R327 1708 aa22.37■■□□□ 1.17
H1F0-201ENST00000340857 KDM5CP41229 1560 aa22.37■■□□□ 1.17
H1F0-201ENST00000340857 ADGRL2O95490 1459 aa22.36■■□□□ 1.17
H1F0-201ENST00000340857 ANKRD30AQ9BXX3 1397 aa22.36■■□□□ 1.17
H1F0-201ENST00000340857 ZBED9Q6R2W3 1325 aa22.36■■□□□ 1.17
H1F0-201ENST00000340857 MAST1Q9Y2H9 1570 aa22.35■■□□□ 1.17
H1F0-201ENST00000340857 ZFYVE16Q7Z3T8 1539 aa22.35■■□□□ 1.17
H1F0-201ENST00000340857 RTEL1-TNFRSF6BF6WH68 1400 aa22.33■■□□□ 1.17
H1F0-201ENST00000340857 ATP7AQ04656 1500 aa22.32■■□□□ 1.16
H1F0-201ENST00000340857 KIF15Q9NS87 1388 aa22.32■■□□□ 1.16
H1F0-201ENST00000340857 MLH3Q9UHC1 1453 aa22.32■■□□□ 1.16
H1F0-201ENST00000340857 INO80Q9ULG1 1556 aaPredicted RBP22.32■■□□□ 1.16
H1F0-201ENST00000340857 KIDINS220Q9ULH0 1771 aa22.32■■□□□ 1.16
H1F0-201ENST00000340857 PPP4R2Q9NY27 417 aa22.31■■□□□ 1.16
H1F0-201ENST00000340857 YEATS2Q9ULM3 1422 aa22.31■■□□□ 1.16
H1F0-201ENST00000340857 HECW2Q9P2P5 1572 aa22.28■■□□□ 1.16
H1F0-201ENST00000340857 DHX29Q7Z478 1369 aaKnown RBP22.26■■□□□ 1.15
H1F0-201ENST00000340857 ZMYM4Q5VZL5 1548 aa22.26■■□□□ 1.15
H1F0-201ENST00000340857 PLXNC1O60486 1568 aa22.26■■□□□ 1.15
H1F0-201ENST00000340857 ANKRD50Q9ULJ7 1429 aa22.26■■□□□ 1.15
H1F0-201ENST00000340857 MSH5O43196 834 aa22.25■■□□□ 1.15
H1F0-201ENST00000340857 FANCIQ9NVI1 1328 aa22.25■■□□□ 1.15
H1F0-201ENST00000340857 USP47Q96K76 1375 aa22.25■■□□□ 1.15
H1F0-201ENST00000340857 PKD2Q13563 968 aa22.24■■□□□ 1.15
H1F0-201ENST00000340857 ABCA6Q8N139 1617 aa22.23■■□□□ 1.15
H1F0-201ENST00000340857 BCORL1Q5H9F3 1711 aa22.22■■□□□ 1.15
H1F0-201ENST00000340857 DIP2CQ9Y2E4 1556 aa22.21■■□□□ 1.15
H1F0-201ENST00000340857 MAGI2Q86UL8 1455 aa22.2■■□□□ 1.14
H1F0-201ENST00000340857 DUOX2Q9NRD8 1548 aa22.2■■□□□ 1.14
H1F0-201ENST00000340857 ARID4BQ4LE39 1312 aaPredicted RBP22.19■■□□□ 1.14
H1F0-201ENST00000340857 A2MP01023 1474 aa22.18■■□□□ 1.14
H1F0-201ENST00000340857 ZNF326Q5BKZ1 582 aaKnown RBP22.18■■□□□ 1.14
H1F0-201ENST00000340857 UHRF1BP1Q6BDS2 1440 aa22.17■■□□□ 1.14
H1F0-201ENST00000340857 SMG6Q86US8 1419 aaKnown RBP22.15■■□□□ 1.14
H1F0-201ENST00000340857 ERBINQ96RT1 1412 aa22.15■■□□□ 1.14
H1F0-201ENST00000340857 KIF3BO15066 747 aa22.15■■□□□ 1.14
H1F0-201ENST00000340857 B4GALNT3Q6L9W6 998 aa22.15■■□□□ 1.14
H1F0-201ENST00000340857 ATP10AO60312 1499 aa22.15■■□□□ 1.14
H1F0-201ENST00000340857 NUP155O75694 1391 aa22.15■■□□□ 1.14
H1F0-201ENST00000340857 RALGAPBQ86X10 1494 aa22.14■■□□□ 1.14
H1F0-201ENST00000340857 POLR3GLQ9BT43 218 aa22.13■■□□□ 1.13
H1F0-201ENST00000340857 KDM5DQ9BY66 1539 aa22.12■■□□□ 1.13
H1F0-201ENST00000340857 ARHGEF40Q8TER5 1519 aa22.11■■□□□ 1.13
H1F0-201ENST00000340857 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.11■■□□□ 1.135e-18■□□□□ 10.2
H1F0-201ENST00000340857 ROCK2O75116 1388 aaKnown RBP22.1■■□□□ 1.13
H1F0-201ENST00000340857 SIGLEC1Q9BZZ2 1709 aa22.1■■□□□ 1.13
H1F0-201ENST00000340857 CNGB1Q14028 1251 aaPredicted RBP22.09■■□□□ 1.13
H1F0-201ENST00000340857 NUDCQ9Y266 331 aa22.08■■□□□ 1.12
H1F0-201ENST00000340857 GGT6Q6P531 493 aa22.07■■□□□ 1.12
H1F0-201ENST00000340857 CARD11Q9BXL7 1154 aa22.07■■□□□ 1.12
H1F0-201ENST00000340857 RNF123Q5XPI4 1314 aa22.06■■□□□ 1.12
H1F0-201ENST00000340857 PNISRQ8TF01 805 aaKnown RBP22.06■■□□□ 1.12
H1F0-201ENST00000340857 REREQ9P2R6 1566 aa22.03■■□□□ 1.12
H1F0-201ENST00000340857 EIF2AK4Q9P2K8 1649 aaKnown RBP22.03■■□□□ 1.12
H1F0-201ENST00000340857 MLECQ14165 292 aa22.02■■□□□ 1.12
H1F0-201ENST00000340857 MROH1Q8NDA8 1641 aa22.01■■□□□ 1.11
H1F0-201ENST00000340857 ST20-MTHFSA0A0A6YYL1 179 aa22.01■■□□□ 1.11
H1F0-201ENST00000340857 TMC1Q8TDI8 760 aa22.01■■□□□ 1.11
H1F0-201ENST00000340857 UNC13BO14795 1591 aa22.01■■□□□ 1.11
H1F0-201ENST00000340857 KDM2AQ9Y2K7 1162 aa22■■□□□ 1.11
H1F0-201ENST00000340857 AGLP35573 1532 aa21.99■■□□□ 1.11
H1F0-201ENST00000340857 DEPDC5O75140 1603 aa21.99■■□□□ 1.11
H1F0-201ENST00000340857 DCAF11Q8TEB1 546 aa21.98■■□□□ 1.11
H1F0-201ENST00000340857 ERICH6Q7L0X2 663 aa21.97■■□□□ 1.11
H1F0-201ENST00000340857 LRPPRCP42704 1394 aaKnown RBP21.97■■□□□ 1.11
H1F0-201ENST00000340857 FAM135AQ9P2D6 1515 aa21.97■■□□□ 1.11
H1F0-201ENST00000340857 KTN1Q86UP2 1357 aaKnown RBP21.96■■□□□ 1.11
H1F0-201ENST00000340857 PRDM15P57071 1507 aaPredicted RBP21.96■■□□□ 1.11
H1F0-201ENST00000340857 RNF17Q9BXT8 1623 aaKnown RBP21.96■■□□□ 1.11
H1F0-201ENST00000340857 BRD4O60885 1362 aaPredicted RBP21.95■■□□□ 1.1
H1F0-201ENST00000340857 MYBBP1AQ9BQG0 1328 aaKnown RBP21.94■■□□□ 1.1
H1F0-201ENST00000340857 RALBP1Q15311 655 aa21.94■■□□□ 1.1
H1F0-201ENST00000340857 VWDEQ8N2E2 1590 aa21.94■■□□□ 1.1
H1F0-201ENST00000340857 WASHC2CQ9Y4E1 1318 aa21.93■■□□□ 1.1
H1F0-201ENST00000340857 E9PCH4 1651 aa21.92■■□□□ 1.1
H1F0-201ENST00000340857 IQGAP3Q86VI3 1631 aa21.92■■□□□ 1.1
H1F0-201ENST00000340857 SENP3-EIF4A1A0A087X0R7 540 aa21.92■■□□□ 1.1
H1F0-201ENST00000340857 KANK1Q14678 1352 aa21.92■■□□□ 1.1
H1F0-201ENST00000340857 CCDC136Q96JN2 1154 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms