RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 DISP1Q96F81 1524 aa12.34□□□□□ -0.43
NECAP1-201ENST00000339754 CDCA7LQ96GN5 454 aa12.34□□□□□ -0.43
NECAP1-201ENST00000339754 CEP170Q5SW79 1584 aa12.34□□□□□ -0.43
NECAP1-201ENST00000339754 ROCK2O75116 1388 aaKnown RBP12.34□□□□□ -0.43
NECAP1-201ENST00000339754 KDM2BQ8NHM5 1336 aa12.34□□□□□ -0.43
NECAP1-201ENST00000339754 MBD5Q9P267 1494 aa12.34□□□□□ -0.43
NECAP1-201ENST00000339754 KIAA0556O60303 1618 aa12.33□□□□□ -0.44
NECAP1-201ENST00000339754 KDM5CP41229 1560 aa12.33□□□□□ -0.44
NECAP1-201ENST00000339754 RALBP1Q15311 655 aa12.33□□□□□ -0.44
NECAP1-201ENST00000339754 C8orf34Q49A92 452 aa12.33□□□□□ -0.44
NECAP1-201ENST00000339754 RRAGDQ9NQL2 400 aaPredicted RBP12.33□□□□□ -0.44
NECAP1-201ENST00000339754 KTN1Q86UP2 1357 aaKnown RBP12.33□□□□□ -0.44
NECAP1-201ENST00000339754 EPRSP07814 1512 aaKnown RBP12.32□□□□□ -0.44
NECAP1-201ENST00000339754 CDK13Q14004 1512 aaKnown RBP12.32□□□□□ -0.44
NECAP1-201ENST00000339754 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
NECAP1-201ENST00000339754 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
NECAP1-201ENST00000339754 ROCK1Q13464 1354 aa12.3□□□□□ -0.44
NECAP1-201ENST00000339754 JPH4Q96JJ6 628 aa12.29□□□□□ -0.44
NECAP1-201ENST00000339754 C20orf194Q5TEA3 1177 aa12.28□□□□□ -0.44
NECAP1-201ENST00000339754 NUP160Q12769 1436 aa12.28□□□□□ -0.44
NECAP1-201ENST00000339754 CENPQQ7L2Z9 268 aaPredicted RBP12.27□□□□□ -0.44
NECAP1-201ENST00000339754 POGKQ9P215 609 aa12.27□□□□□ -0.44
NECAP1-201ENST00000339754 KIF14Q15058 1648 aa12.27□□□□□ -0.45
NECAP1-201ENST00000339754 GLIPR1L2Q4G1C9 344 aa12.26□□□□□ -0.45
NECAP1-201ENST00000339754 ZNF326Q5BKZ1 582 aaKnown RBP12.26□□□□□ -0.45
NECAP1-201ENST00000339754 NLRP13Q86W25 1043 aa12.26□□□□□ -0.45
NECAP1-201ENST00000339754 ZMYND15Q9H091 742 aa12.25□□□□□ -0.45
NECAP1-201ENST00000339754 PZPP20742 1482 aa12.25□□□□□ -0.45
NECAP1-201ENST00000339754 DAPK1P53355 1430 aa12.25□□□□□ -0.45
NECAP1-201ENST00000339754 NUP153P49790 1475 aaKnown RBP12.25□□□□□ -0.45
NECAP1-201ENST00000339754 E9PCH4 1651 aa12.24□□□□□ -0.45
NECAP1-201ENST00000339754 RAPGEF6Q8TEU7 1601 aa12.24□□□□□ -0.45
NECAP1-201ENST00000339754 PARD3Q8TEW0 1356 aa12.24□□□□□ -0.45
NECAP1-201ENST00000339754 ABCC5O15440 1437 aa12.24□□□□□ -0.45
NECAP1-201ENST00000339754 UHRF1BP1Q6BDS2 1440 aa12.24□□□□□ -0.45
NECAP1-201ENST00000339754 CARMIL2Q6F5E8 1435 aa12.24□□□□□ -0.45
NECAP1-201ENST00000339754 PLB1Q6P1J6 1458 aa12.23□□□□□ -0.45
NECAP1-201ENST00000339754 VSIG10Q8N0Z9 540 aa12.23□□□□□ -0.45
NECAP1-201ENST00000339754 INSRP06213 1382 aa12.23□□□□□ -0.45
NECAP1-201ENST00000339754 ST20-MTHFSA0A0A6YYL1 179 aa12.23□□□□□ -0.45
NECAP1-201ENST00000339754 RALGAPBQ86X10 1494 aa12.22□□□□□ -0.45
NECAP1-201ENST00000339754 L1TD1Q5T7N2 865 aaKnown RBP12.22□□□□□ -0.45
NECAP1-201ENST00000339754 BLMP54132 1417 aaPredicted RBP12.22□□□□□ -0.45
NECAP1-201ENST00000339754 USP19O94966 1318 aa12.22□□□□□ -0.45
NECAP1-201ENST00000339754 CARD11Q9BXL7 1154 aa12.22□□□□□ -0.45
NECAP1-201ENST00000339754 KIAA1107Q9UPP5 1409 aa12.2□□□□□ -0.46
NECAP1-201ENST00000339754 PER1O15534 1290 aaPredicted RBP12.2□□□□□ -0.46
NECAP1-201ENST00000339754 DNMT1P26358 1616 aaKnown RBP12.2□□□□□ -0.46
NECAP1-201ENST00000339754 ZMYM4Q5VZL5 1548 aa12.19□□□□□ -0.46
NECAP1-201ENST00000339754 RGS3P49796 1198 aa12.19□□□□□ -0.46
NECAP1-201ENST00000339754 RRP9O43818 475 aaKnown RBP12.18□□□□□ -0.46
NECAP1-201ENST00000339754 CLCN1P35523 988 aa12.18□□□□□ -0.46
NECAP1-201ENST00000339754 HSP90AA2PQ14568 343 aaPredicted RBP12.18□□□□□ -0.46
NECAP1-201ENST00000339754 PRG4Q92954 1404 aaPredicted RBP12.18□□□□□ -0.46
NECAP1-201ENST00000339754 ZNF644Q9H582 1327 aaPredicted RBP12.18□□□□□ -0.46
NECAP1-201ENST00000339754 XRCC6P12956 609 aaKnown RBP eCLIP12.18□□□□□ -0.46
NECAP1-201ENST00000339754 CHD1O14646 1710 aa12.17□□□□□ -0.46
NECAP1-201ENST00000339754 NAP1L5Q96NT1 182 aaPredicted RBP12.17□□□□□ -0.46
NECAP1-201ENST00000339754 PNNQ9H307 717 aaKnown RBP12.17□□□□□ -0.46
NECAP1-201ENST00000339754 ANTXR1Q9H6X2 564 aa12.17□□□□□ -0.46
NECAP1-201ENST00000339754 PLEKHH2Q8IVE3 1493 aa12.16□□□□□ -0.46
NECAP1-201ENST00000339754 PKD2Q13563 968 aa12.16□□□□□ -0.46
NECAP1-201ENST00000339754 FSD2A1L4K1 749 aa12.16□□□□□ -0.46
NECAP1-201ENST00000339754 HSP90AA1P07900 732 aaKnown RBP12.15□□□□□ -0.46
NECAP1-201ENST00000339754 DUSP27Q5VZP5 1158 aa12.15□□□□□ -0.46
NECAP1-201ENST00000339754 SEC24BO95487 1268 aa12.15□□□□□ -0.47
NECAP1-201ENST00000339754 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
NECAP1-201ENST00000339754 TROQ12816 1431 aaPredicted RBP12.13□□□□□ -0.47
NECAP1-201ENST00000339754 SLKQ9H2G2 1235 aaPredicted RBP12.13□□□□□ -0.47
NECAP1-201ENST00000339754 BECN1Q14457 450 aa12.13□□□□□ -0.47
NECAP1-201ENST00000339754 ARHGEF12Q9NZN5 1544 aa12.13□□□□□ -0.47
NECAP1-201ENST00000339754 ABCA8O94911 1581 aa12.12□□□□□ -0.47
NECAP1-201ENST00000339754 PTPRGP23470 1445 aa12.12□□□□□ -0.47
NECAP1-201ENST00000339754 PANK2Q9BZ23 570 aa12.12□□□□□ -0.47
NECAP1-201ENST00000339754 GOLGA6L3A6NEY3 463 aa12.12□□□□□ -0.47
NECAP1-201ENST00000339754 PLEKHH1Q9ULM0 1364 aa12.11□□□□□ -0.47
NECAP1-201ENST00000339754 CC2D1BQ5T0F9 858 aaKnown RBP12.11□□□□□ -0.47
NECAP1-201ENST00000339754 ADAMTS8Q9UP79 889 aa12.11□□□□□ -0.47
NECAP1-201ENST00000339754 KDM2AQ9Y2K7 1162 aa12.11□□□□□ -0.47
NECAP1-201ENST00000339754 ATP10BO94823 1461 aa12.11□□□□□ -0.47
NECAP1-201ENST00000339754 ZNF521Q96K83 1311 aa12.11□□□□□ -0.47
NECAP1-201ENST00000339754 PLEKHD1A6NEE1 506 aa12.11□□□□□ -0.47
NECAP1-201ENST00000339754 NLRP1Q9C000 1473 aa12.1□□□□□ -0.47
NECAP1-201ENST00000339754 IGHDP01880 384 aa12.1□□□□□ -0.47
NECAP1-201ENST00000339754 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.1□□□□□ -0.47
NECAP1-201ENST00000339754 CFDP1Q9UEE9 299 aaPredicted RBP12.1□□□□□ -0.47
NECAP1-201ENST00000339754 ZNF777Q9ULD5 760 aaPredicted RBP12.1□□□□□ -0.47
NECAP1-201ENST00000339754 EIF3AQ14152 1382 aaKnown RBP12.08□□□□□ -0.47
NECAP1-201ENST00000339754 ARXQ96QS3 562 aa12.08□□□□□ -0.48
NECAP1-201ENST00000339754 GPATCH8Q9UKJ3 1502 aaKnown RBP12.08□□□□□ -0.48
NECAP1-201ENST00000339754 GOLGA2Q08379 1002 aa12.07□□□□□ -0.48
NECAP1-201ENST00000339754 MCM4P33991 863 aa12.07□□□□□ -0.48
NECAP1-201ENST00000339754 SLFN5Q08AF3 891 aa12.07□□□□□ -0.48
NECAP1-201ENST00000339754 TRMT2AQ8IZ69 625 aaKnown RBP12.07□□□□□ -0.48
NECAP1-201ENST00000339754 ERCC6L2Q5T890 1561 aa12.07□□□□□ -0.48
NECAP1-201ENST00000339754 TBC1D2Q9BYX2 928 aa12.06□□□□□ -0.48
NECAP1-201ENST00000339754 PANK3Q9H999 370 aa12.06□□□□□ -0.48
NECAP1-201ENST00000339754 SHROOM2Q13796 1616 aa12.06□□□□□ -0.48
NECAP1-201ENST00000339754 ADCY10Q96PN6 1610 aa12.06□□□□□ -0.48
NECAP1-201ENST00000339754 ADGBQ8N7X0 1667 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms