RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 L3MBTL2Q969R5 705 aa22.88■■□□□ 1.25
LITAF-201ENST00000339430 KDM5CP41229 1560 aa22.86■■□□□ 1.25
LITAF-201ENST00000339430 SLC4A1APQ9BWU0 796 aaKnown RBP22.86■■□□□ 1.25
LITAF-201ENST00000339430 TEX14Q8IWB6 1497 aa22.85■■□□□ 1.25
LITAF-201ENST00000339430 NUP155O75694 1391 aa22.84■■□□□ 1.25
LITAF-201ENST00000339430 KIDINS220Q9ULH0 1771 aa22.84■■□□□ 1.25
LITAF-201ENST00000339430 PZPP20742 1482 aa22.84■■□□□ 1.25
LITAF-201ENST00000339430 ERBINQ96RT1 1412 aa22.84■■□□□ 1.25
LITAF-201ENST00000339430 ANKRD30BQ9BXX2 1392 aa22.82■■□□□ 1.24
LITAF-201ENST00000339430 WASHC2AQ641Q2 1341 aa22.81■■□□□ 1.24
LITAF-201ENST00000339430 MLH3Q9UHC1 1453 aa22.81■■□□□ 1.24
LITAF-201ENST00000339430 EIF4G2P78344 907 aaKnown RBP eCLIP22.81■■□□□ 1.24
LITAF-201ENST00000339430 RICTORQ6R327 1708 aa22.8■■□□□ 1.24
LITAF-201ENST00000339430 HECW2Q9P2P5 1572 aa22.8■■□□□ 1.24
LITAF-201ENST00000339430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.79■■□□□ 1.24
LITAF-201ENST00000339430 RPRD2Q5VT52 1461 aaKnown RBP22.78■■□□□ 1.24
LITAF-201ENST00000339430 KDM5DQ9BY66 1539 aa22.77■■□□□ 1.24
LITAF-201ENST00000339430 DHX29Q7Z478 1369 aaKnown RBP22.76■■□□□ 1.23
LITAF-201ENST00000339430 UNC13BO14795 1591 aa22.76■■□□□ 1.23
LITAF-201ENST00000339430 FRMPD1Q5SYB0 1578 aa22.75■■□□□ 1.23
LITAF-201ENST00000339430 PKD2Q13563 968 aa22.75■■□□□ 1.23
LITAF-201ENST00000339430 NBPF8Q3BBV2 869 aa22.75■■□□□ 1.23
LITAF-201ENST00000339430 TRHP20396 242 aaPredicted RBP22.74■■□□□ 1.23
LITAF-201ENST00000339430 FAM135AQ9P2D6 1515 aa22.73■■□□□ 1.23
LITAF-201ENST00000339430 ABCA6Q8N139 1617 aa22.72■■□□□ 1.23
LITAF-201ENST00000339430 A2MP01023 1474 aa22.72■■□□□ 1.23
LITAF-201ENST00000339430 KIF3BO15066 747 aa22.72■■□□□ 1.23
LITAF-201ENST00000339430 BCANQ96GW7 911 aa22.72■■□□□ 1.23
LITAF-201ENST00000339430 C11orf95C9JLR9 678 aaPredicted RBP22.7■■□□□ 1.22
LITAF-201ENST00000339430 MAGI2Q86UL8 1455 aa22.7■■□□□ 1.22
LITAF-201ENST00000339430 FKBP8Q14318 412 aa22.7■■□□□ 1.22
LITAF-201ENST00000339430 COL17A1Q9UMD9 1497 aaPredicted RBP22.69■■□□□ 1.22
LITAF-201ENST00000339430 YEATS2Q9ULM3 1422 aa22.69■■□□□ 1.22
LITAF-201ENST00000339430 EIF2AK4Q9P2K8 1649 aaKnown RBP22.68■■□□□ 1.22
LITAF-201ENST00000339430 DIP2CQ9Y2E4 1556 aa22.68■■□□□ 1.22
LITAF-201ENST00000339430 IQGAP3Q86VI3 1631 aa22.67■■□□□ 1.22
LITAF-201ENST00000339430 ZMYM4Q5VZL5 1548 aa22.67■■□□□ 1.22
LITAF-201ENST00000339430 DEPDC5O75140 1603 aa22.65■■□□□ 1.22
LITAF-201ENST00000339430 CNTLNQ9NXG0 1405 aa22.64■■□□□ 1.22
LITAF-201ENST00000339430 CCDC7Q96M83 1385 aa22.63■■□□□ 1.21
LITAF-201ENST00000339430 KANK1Q14678 1352 aa22.61■■□□□ 1.21
LITAF-201ENST00000339430 MROH1Q8NDA8 1641 aa22.6■■□□□ 1.21
LITAF-201ENST00000339430 HNRNPUQ00839 825 aaKnown RBP eCLIP22.6■■□□□ 1.21
LITAF-201ENST00000339430 ZNF326Q5BKZ1 582 aaKnown RBP22.6■■□□□ 1.21
LITAF-201ENST00000339430 PRDM15P57071 1507 aaPredicted RBP22.59■■□□□ 1.21
LITAF-201ENST00000339430 GGT6Q6P531 493 aa22.58■■□□□ 1.21
LITAF-201ENST00000339430 NEFLP07196 543 aa22.57■■□□□ 1.2
LITAF-201ENST00000339430 CCDC184Q52MB2 194 aa22.57■■□□□ 1.2
LITAF-201ENST00000339430 RNF17Q9BXT8 1623 aaKnown RBP22.57■■□□□ 1.2
LITAF-201ENST00000339430 VWDEQ8N2E2 1590 aa22.57■■□□□ 1.2
LITAF-201ENST00000339430 SPATA31E1Q6ZUB1 1445 aa22.56■■□□□ 1.2
LITAF-201ENST00000339430 ATP10AO60312 1499 aa22.56■■□□□ 1.2
LITAF-201ENST00000339430 KIF7Q2M1P5 1343 aa22.55■■□□□ 1.2
LITAF-201ENST00000339430 BCORL1Q5H9F3 1711 aa22.55■■□□□ 1.2
LITAF-201ENST00000339430 POLR1AO95602 1720 aaPredicted RBP22.53■■□□□ 1.2
LITAF-201ENST00000339430 PRKRIP1Q9H875 184 aaPredicted RBP22.52■■□□□ 1.2
LITAF-201ENST00000339430 E9PCH4 1651 aa22.52■■□□□ 1.2
LITAF-201ENST00000339430 TET3O43151 1660 aa22.52■■□□□ 1.2
LITAF-201ENST00000339430 TSHZ2Q9NRE2 1034 aa22.51■■□□□ 1.19
LITAF-201ENST00000339430 PLA2R1Q13018 1463 aa22.51■■□□□ 1.19
LITAF-201ENST00000339430 ARHGEF40Q8TER5 1519 aa22.49■■□□□ 1.19
LITAF-201ENST00000339430 POLR3GLQ9BT43 218 aa22.48■■□□□ 1.19
LITAF-201ENST00000339430 CEP152O94986 1710 aa22.48■■□□□ 1.19
LITAF-201ENST00000339430 WASHC2CQ9Y4E1 1318 aa22.48■■□□□ 1.19
LITAF-201ENST00000339430 CCDC144AA2RUR9 1427 aa22.47■■□□□ 1.19
LITAF-201ENST00000339430 REREQ9P2R6 1566 aa22.47■■□□□ 1.19
LITAF-201ENST00000339430 FAM9BQ8IZU0 186 aa22.46■■□□□ 1.19
LITAF-201ENST00000339430 USP47Q96K76 1375 aa22.46■■□□□ 1.19
LITAF-201ENST00000339430 CNGB1Q14028 1251 aaPredicted RBP22.46■■□□□ 1.19
LITAF-201ENST00000339430 LMTK2Q8IWU2 1503 aa22.46■■□□□ 1.19
LITAF-201ENST00000339430 EFCAB6Q5THR3 1501 aa22.45■■□□□ 1.18
LITAF-201ENST00000339430 MRS2Q9HD23 443 aa22.45■■□□□ 1.18
LITAF-201ENST00000339430 SIGLEC1Q9BZZ2 1709 aa22.44■■□□□ 1.18
LITAF-201ENST00000339430 ABCC3O15438 1527 aa22.44■■□□□ 1.18
LITAF-201ENST00000339430 AGLP35573 1532 aa22.42■■□□□ 1.18
LITAF-201ENST00000339430 KDM2AQ9Y2K7 1162 aa22.41■■□□□ 1.18
LITAF-201ENST00000339430 SPHKAPQ2M3C7 1700 aa22.4■■□□□ 1.18
LITAF-201ENST00000339430 PTPRTO14522 1441 aa22.4■■□□□ 1.18
LITAF-201ENST00000339430 TRPM2O94759 1503 aa22.38■■□□□ 1.17
LITAF-201ENST00000339430 IRX6P78412 446 aaPredicted RBP22.38■■□□□ 1.17
LITAF-201ENST00000339430 MLECQ14165 292 aa22.38■■□□□ 1.17
LITAF-201ENST00000339430 NPATQ14207 1427 aa22.38■■□□□ 1.17
LITAF-201ENST00000339430 CAMSAP1Q5T5Y3 1602 aa22.37■■□□□ 1.17
LITAF-201ENST00000339430 CARD11Q9BXL7 1154 aa22.36■■□□□ 1.17
LITAF-201ENST00000339430 ZC3H13Q5T200 1668 aaKnown RBP22.36■■□□□ 1.17
LITAF-201ENST00000339430 RGL3Q3MIN7 710 aa22.35■■□□□ 1.17
LITAF-201ENST00000339430 DCAF11Q8TEB1 546 aa22.35■■□□□ 1.17
LITAF-201ENST00000339430 UHRF1BP1Q6BDS2 1440 aa22.35■■□□□ 1.17
LITAF-201ENST00000339430 RALGAPBQ86X10 1494 aa22.35■■□□□ 1.17
LITAF-201ENST00000339430 CFAP65Q6ZU64 1925 aaKnown RBP22.34■■□□□ 1.17
LITAF-201ENST00000339430 ARID4BQ4LE39 1312 aaPredicted RBP22.34■■□□□ 1.17
LITAF-201ENST00000339430 CLTCL1P53675 1640 aa22.33■■□□□ 1.16
LITAF-201ENST00000339430 UGGT1Q9NYU2 1555 aa22.31■■□□□ 1.16
LITAF-201ENST00000339430 PPP6R1Q9UPN7 881 aa22.31■■□□□ 1.16
LITAF-201ENST00000339430 ARHGAP31Q2M1Z3 1444 aa22.29■■□□□ 1.16
LITAF-201ENST00000339430 ST20-MTHFSA0A0A6YYL1 179 aa22.27■■□□□ 1.16
LITAF-201ENST00000339430 CLTCQ00610 1675 aaKnown RBP22.27■■□□□ 1.16
LITAF-201ENST00000339430 ZBED9Q6R2W3 1325 aa22.25■■□□□ 1.15
LITAF-201ENST00000339430 NOS1P29475 1434 aa22.24■■□□□ 1.15
LITAF-201ENST00000339430 ESF1Q9H501 851 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms