RNA–Protein interactions for RNA: ENST00000339089.10

PHF20-201, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-201ENST00000339089 ERBINQ96RT1 1412 aa19.51■□□□□ 0.71
PHF20-201ENST00000339089 CEBPAP49715 358 aaPredicted RBP19.5■□□□□ 0.71
PHF20-201ENST00000339089 PPP6R1Q9UPN7 881 aa19.48■□□□□ 0.71
PHF20-201ENST00000339089 CNTLNQ9NXG0 1405 aa19.47■□□□□ 0.71
PHF20-201ENST00000339089 CLTCQ00610 1675 aaKnown RBP19.47■□□□□ 0.71
PHF20-201ENST00000339089 C3P01024 1663 aa19.46■□□□□ 0.71
PHF20-201ENST00000339089 ANKRD50Q9ULJ7 1429 aa19.45■□□□□ 0.7
PHF20-201ENST00000339089 DEPDC5O75140 1603 aa19.45■□□□□ 0.7
PHF20-201ENST00000339089 MROH2AA6NES4 1674 aa19.45■□□□□ 0.7
PHF20-201ENST00000339089 ZMYM3Q14202 1370 aa19.45■□□□□ 0.7
PHF20-201ENST00000339089 PRDM15P57071 1507 aaPredicted RBP19.43■□□□□ 0.7
PHF20-201ENST00000339089 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
PHF20-201ENST00000339089 KDM5DQ9BY66 1539 aa19.43■□□□□ 0.7
PHF20-201ENST00000339089 FAM135AQ9P2D6 1515 aa19.43■□□□□ 0.7
PHF20-201ENST00000339089 ABCC3O15438 1527 aa19.42■□□□□ 0.7
PHF20-201ENST00000339089 ESF1Q9H501 851 aaKnown RBP19.41■□□□□ 0.7
PHF20-201ENST00000339089 VWDEQ8N2E2 1590 aa19.4■□□□□ 0.7
PHF20-201ENST00000339089 WASHC2CQ9Y4E1 1318 aa19.4■□□□□ 0.7
PHF20-201ENST00000339089 NAIPQ13075 1403 aa19.4■□□□□ 0.7
PHF20-201ENST00000339089 CEP152O94986 1710 aa19.36■□□□□ 0.69
PHF20-201ENST00000339089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.36■□□□□ 0.698e-7■■□□□ 12.2
PHF20-201ENST00000339089 ZC3H13Q5T200 1668 aaKnown RBP19.36■□□□□ 0.69
PHF20-201ENST00000339089 HFM1A2PYH4 1435 aa19.35■□□□□ 0.69
PHF20-201ENST00000339089 FBXO31Q5XUX0 539 aaPredicted RBP19.35■□□□□ 0.69
PHF20-201ENST00000339089 PZPP20742 1482 aa19.35■□□□□ 0.69
PHF20-201ENST00000339089 LMTK3Q96Q04 1460 aa19.35■□□□□ 0.69
PHF20-201ENST00000339089 UNC13BO14795 1591 aa19.35■□□□□ 0.69
PHF20-201ENST00000339089 LMTK2Q8IWU2 1503 aa19.34■□□□□ 0.69
PHF20-201ENST00000339089 NPATQ14207 1427 aa19.34■□□□□ 0.69
PHF20-201ENST00000339089 GCC2Q8IWJ2 1684 aa19.34■□□□□ 0.69
PHF20-201ENST00000339089 CAMSAP1Q5T5Y3 1602 aa19.32■□□□□ 0.68
PHF20-201ENST00000339089 SETD1BQ9UPS6 1966 aaKnown RBP19.32■□□□□ 0.68
PHF20-201ENST00000339089 ARHGAP31Q2M1Z3 1444 aa19.3■□□□□ 0.68
PHF20-201ENST00000339089 KANK1Q14678 1352 aa19.29■□□□□ 0.68
PHF20-201ENST00000339089 PREX1Q8TCU6 1659 aa19.29■□□□□ 0.68
PHF20-201ENST00000339089 ERVK-7P63135 1459 aa19.26■□□□□ 0.67
PHF20-201ENST00000339089 EFCAB6Q5THR3 1501 aa19.26■□□□□ 0.67
PHF20-201ENST00000339089 SPATA31D1Q6ZQQ2 1576 aa19.26■□□□□ 0.67
PHF20-201ENST00000339089 IQGAP3Q86VI3 1631 aa19.26■□□□□ 0.67
PHF20-201ENST00000339089 NUP155O75694 1391 aa19.25■□□□□ 0.67
PHF20-201ENST00000339089 HSPA2P54652 639 aa19.25■□□□□ 0.67
PHF20-201ENST00000339089 UHRF1BP1Q6BDS2 1440 aa19.25■□□□□ 0.67
PHF20-201ENST00000339089 TNRQ92752 1358 aa19.25■□□□□ 0.67
PHF20-201ENST00000339089 MYO3AQ8NEV4 1616 aa19.24■□□□□ 0.67
PHF20-201ENST00000339089 TET3O43151 1660 aa19.23■□□□□ 0.67
PHF20-201ENST00000339089 CFAP65Q6ZU64 1925 aaKnown RBP19.22■□□□□ 0.67
PHF20-201ENST00000339089 NOS1P29475 1434 aa19.21■□□□□ 0.67
PHF20-201ENST00000339089 ZNF142P52746 1687 aaPredicted RBP19.2■□□□□ 0.66
PHF20-201ENST00000339089 SETD5Q9C0A6 1442 aa19.19■□□□□ 0.66
PHF20-201ENST00000339089 CEP170BQ9Y4F5 1589 aaPredicted RBP19.19■□□□□ 0.66
PHF20-201ENST00000339089 E9PCH4 1651 aa19.19■□□□□ 0.66
PHF20-201ENST00000339089 A2ML1A8K2U0 1454 aa19.18■□□□□ 0.66
PHF20-201ENST00000339089 RPRD2Q5VT52 1461 aaKnown RBP19.18■□□□□ 0.66
PHF20-201ENST00000339089 SYNMO15061 1565 aa19.18■□□□□ 0.66
PHF20-201ENST00000339089 NLRP1Q9C000 1473 aa19.16■□□□□ 0.66
PHF20-201ENST00000339089 RAB3GAP2Q9H2M9 1393 aa19.14■□□□□ 0.66
PHF20-201ENST00000339089 STRCQ7RTU9 1775 aa19.13■□□□□ 0.65
PHF20-201ENST00000339089 TRIM52Q96A61 297 aa19.12■□□□□ 0.65
PHF20-201ENST00000339089 IDI1Q13907 227 aa19.12■□□□□ 0.65
PHF20-201ENST00000339089 PTPRTO14522 1441 aa19.1■□□□□ 0.65
PHF20-201ENST00000339089 PIK3C2BO00750 1634 aa19.09■□□□□ 0.65
PHF20-201ENST00000339089 UGGT1Q9NYU2 1555 aa19.09■□□□□ 0.65
PHF20-201ENST00000339089 PLA2R1Q13018 1463 aa19.09■□□□□ 0.65
PHF20-201ENST00000339089 UBR1Q8IWV7 1749 aa19.09■□□□□ 0.65
PHF20-201ENST00000339089 PKD2Q13563 968 aa19.08■□□□□ 0.64
PHF20-201ENST00000339089 SLC4A1APQ9BWU0 796 aaKnown RBP19.07■□□□□ 0.64
PHF20-201ENST00000339089 HRCP23327 699 aa19.06■□□□□ 0.64
PHF20-201ENST00000339089 MPHOSPH9Q99550 1183 aa19.06■□□□□ 0.64
PHF20-201ENST00000339089 SLC52A1Q9NWF4 448 aa19.06■□□□□ 0.64
PHF20-201ENST00000339089 THEMISQ8N1K5 641 aaPredicted RBP19.04■□□□□ 0.64
PHF20-201ENST00000339089 NCKAP5LQ9HCH0 1330 aa19.04■□□□□ 0.64
PHF20-201ENST00000339089 SPHKAPQ2M3C7 1700 aa19.04■□□□□ 0.64
PHF20-201ENST00000339089 FOXD1Q16676 465 aa19.04■□□□□ 0.64
PHF20-201ENST00000339089 KDM5AP29375 1690 aaKnown RBP19.03■□□□□ 0.64
PHF20-201ENST00000339089 ARHGAP23Q9P227 1491 aa19.02■□□□□ 0.64
PHF20-201ENST00000339089 TRIM26Q12899 539 aaPredicted RBP19.02■□□□□ 0.64
PHF20-201ENST00000339089 ADGRB3O60242 1522 aa19.02■□□□□ 0.63
PHF20-201ENST00000339089 TMEM131LA2VDJ0 1609 aa19.01■□□□□ 0.63
PHF20-201ENST00000339089 TRPM2O94759 1503 aa19.01■□□□□ 0.63
PHF20-201ENST00000339089 NEURL4Q96JN8 1562 aa19.01■□□□□ 0.63
PHF20-201ENST00000339089 SLIT1O75093 1534 aa19■□□□□ 0.63
PHF20-201ENST00000339089 ACIN1Q9UKV3 1341 aaKnown RBP19■□□□□ 0.63
PHF20-201ENST00000339089 CLTCL1P53675 1640 aa18.99■□□□□ 0.63
PHF20-201ENST00000339089 LTKP29376 864 aa18.99■□□□□ 0.63
PHF20-201ENST00000339089 TMEM2Q9UHN6 1383 aa18.98■□□□□ 0.63
PHF20-201ENST00000339089 MYO5BQ9ULV0 1848 aa18.98■□□□□ 0.63
PHF20-201ENST00000339089 POLR1AO95602 1720 aaPredicted RBP18.96■□□□□ 0.63
PHF20-201ENST00000339089 MED14O60244 1454 aa18.96■□□□□ 0.63
PHF20-201ENST00000339089 ANKLE2Q86XL3 938 aa18.95■□□□□ 0.62
PHF20-201ENST00000339089 ZFYVE9O95405 1425 aa18.95■□□□□ 0.62
PHF20-201ENST00000339089 STAG3Q9UJ98 1225 aa18.93■□□□□ 0.62
PHF20-201ENST00000339089 DMRT2Q9Y5R5 561 aa18.93■□□□□ 0.62
PHF20-201ENST00000339089 SCAF11Q99590 1463 aaKnown RBP18.93■□□□□ 0.62
PHF20-201ENST00000339089 TXNDC2Q86VQ3 553 aa18.92■□□□□ 0.62
PHF20-201ENST00000339089 NPHP4O75161 1426 aaPredicted RBP18.91■□□□□ 0.62
PHF20-201ENST00000339089 CHGAP10645 457 aaKnown RBP18.9■□□□□ 0.62
PHF20-201ENST00000339089 RIMS2Q9UQ26 1411 aa18.89■□□□□ 0.62
PHF20-201ENST00000339089 ANKRD30BQ9BXX2 1392 aa18.89■□□□□ 0.61
PHF20-201ENST00000339089 IQGAP1P46940 1657 aa18.87■□□□□ 0.61
PHF20-201ENST00000339089 SPATA31E1Q6ZUB1 1445 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms