RNA–Protein interactions for RNA: ENST00000337221.8

SCARA3-202, Transcript of scavenger receptor class A member 3, humanhuman

TSL 1 (best) BASIC

Gene SCARA3, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-202ENST00000337221 NBPF8Q3BBV2 869 aa39.91■■■■□ 3.98
SCARA3-202ENST00000337221 DHX29Q7Z478 1369 aaKnown RBP39.9■■■■□ 3.98
SCARA3-202ENST00000337221 HIRIP3Q9BW71 556 aaPredicted RBP39.89■■■■□ 3.98
SCARA3-202ENST00000337221 PLA2R1Q13018 1463 aa39.89■■■■□ 3.98
SCARA3-202ENST00000337221 MYT1LQ9UL68 1186 aa39.88■■■■□ 3.97
SCARA3-202ENST00000337221 MLH3Q9UHC1 1453 aa39.86■■■■□ 3.97
SCARA3-202ENST00000337221 DIP2BQ9P265 1576 aa39.83■■■■□ 3.97
SCARA3-202ENST00000337221 HECW2Q9P2P5 1572 aa39.83■■■■□ 3.97
SCARA3-202ENST00000337221 ATP10AO60312 1499 aa39.83■■■■□ 3.97
SCARA3-202ENST00000337221 VWDEQ8N2E2 1590 aa39.82■■■■□ 3.96
SCARA3-202ENST00000337221 CCDC144AA2RUR9 1427 aa39.8■■■■□ 3.96
SCARA3-202ENST00000337221 MROH1Q8NDA8 1641 aa39.78■■■■□ 3.96
SCARA3-202ENST00000337221 PRDM15P57071 1507 aaPredicted RBP39.77■■■■□ 3.96
SCARA3-202ENST00000337221 E9PCH4 1651 aa39.77■■■■□ 3.96
SCARA3-202ENST00000337221 A2MP01023 1474 aa39.76■■■■□ 3.96
SCARA3-202ENST00000337221 UHRF1BP1Q6BDS2 1440 aa39.75■■■■□ 3.95
SCARA3-202ENST00000337221 KIF3BO15066 747 aa39.75■■■■□ 3.95
SCARA3-202ENST00000337221 HSPA5P11021 654 aaKnown RBP39.74■■■■□ 3.95
SCARA3-202ENST00000337221 TET3O43151 1660 aa39.74■■■■□ 3.95
SCARA3-202ENST00000337221 RICTORQ6R327 1708 aa39.72■■■■□ 3.95
SCARA3-202ENST00000337221 EIF4G2P78344 907 aaKnown RBP eCLIP39.72■■■■□ 3.95
SCARA3-202ENST00000337221 KANK1Q14678 1352 aa39.71■■■■□ 3.95
SCARA3-202ENST00000337221 FAM69CQ0P6D2 419 aa39.7■■■■□ 3.95
SCARA3-202ENST00000337221 FRMPD1Q5SYB0 1578 aa39.7■■■■□ 3.95
SCARA3-202ENST00000337221 ABCA6Q8N139 1617 aa39.7■■■■□ 3.95
SCARA3-202ENST00000337221 RAPGEF3O95398 923 aa39.67■■■■□ 3.94
SCARA3-202ENST00000337221 DDX10Q13206 875 aaKnown RBP39.67■■■■□ 3.94
SCARA3-202ENST00000337221 RNF17Q9BXT8 1623 aaKnown RBP39.67■■■■□ 3.94
SCARA3-202ENST00000337221 BCORL1Q5H9F3 1711 aa39.62■■■■□ 3.93
SCARA3-202ENST00000337221 PPRC1Q5VV67 1664 aaKnown RBP39.62■■■■□ 3.93
SCARA3-202ENST00000337221 PTPRTO14522 1441 aa39.61■■■■□ 3.93
SCARA3-202ENST00000337221 SPATA31E1Q6ZUB1 1445 aa39.61■■■■□ 3.93
SCARA3-202ENST00000337221 SPHKAPQ2M3C7 1700 aa39.61■■■■□ 3.93
SCARA3-202ENST00000337221 TRPM2O94759 1503 aa39.6■■■■□ 3.93
SCARA3-202ENST00000337221 RALGAPBQ86X10 1494 aa39.6■■■■□ 3.93
SCARA3-202ENST00000337221 ZNF326Q5BKZ1 582 aaKnown RBP39.59■■■■□ 3.93
SCARA3-202ENST00000337221 DCAF11Q8TEB1 546 aa39.58■■■■□ 3.93
SCARA3-202ENST00000337221 DIP2CQ9Y2E4 1556 aa39.58■■■■□ 3.93
SCARA3-202ENST00000337221 LMTK2Q8IWU2 1503 aa39.56■■■■□ 3.92
SCARA3-202ENST00000337221 TSPOAP1O95153 1857 aa39.55■■■■□ 3.92
SCARA3-202ENST00000337221 KDM2AQ9Y2K7 1162 aa39.53■■■■□ 3.92
SCARA3-202ENST00000337221 EFCAB6Q5THR3 1501 aa39.52■■■■□ 3.92
SCARA3-202ENST00000337221 CEP152O94986 1710 aa39.5■■■■□ 3.91
SCARA3-202ENST00000337221 WASHC2AQ641Q2 1341 aa39.48■■■■□ 3.91
SCARA3-202ENST00000337221 RGL3Q3MIN7 710 aa39.48■■■■□ 3.91
SCARA3-202ENST00000337221 CLTCL1P53675 1640 aa39.47■■■■□ 3.91
SCARA3-202ENST00000337221 PRAG1Q86YV5 1406 aa39.47■■■■□ 3.91
SCARA3-202ENST00000337221 ZMYM4Q5VZL5 1548 aa39.47■■■■□ 3.91
SCARA3-202ENST00000337221 KIF13AQ9H1H9 1805 aa39.47■■■■□ 3.91
SCARA3-202ENST00000337221 YEATS2Q9ULM3 1422 aa39.44■■■■□ 3.9
SCARA3-202ENST00000337221 USP47Q96K76 1375 aa39.44■■■■□ 3.9
SCARA3-202ENST00000337221 TRPM1Q7Z4N2 1603 aa39.42■■■■□ 3.9
SCARA3-202ENST00000337221 POLR1AO95602 1720 aaPredicted RBP39.41■■■■□ 3.9
SCARA3-202ENST00000337221 C11orf95C9JLR9 678 aaPredicted RBP39.39■■■■□ 3.9
SCARA3-202ENST00000337221 CCDC7Q96M83 1385 aa39.37■■■■□ 3.89
SCARA3-202ENST00000337221 GGT6Q6P531 493 aa39.36■■■■□ 3.89
SCARA3-202ENST00000337221 ABCC3O15438 1527 aa39.35■■■■□ 3.89
SCARA3-202ENST00000337221 CARD11Q9BXL7 1154 aa39.34■■■■□ 3.89
SCARA3-202ENST00000337221 NEURL4Q96JN8 1562 aa39.33■■■■□ 3.89
SCARA3-202ENST00000337221 ROCK2O75116 1388 aaKnown RBP39.3■■■■□ 3.88
SCARA3-202ENST00000337221 NPATQ14207 1427 aa39.28■■■■□ 3.88
SCARA3-202ENST00000337221 UGGT1Q9NYU2 1555 aa39.28■■■■□ 3.88
SCARA3-202ENST00000337221 GPRASP1Q5JY77 1395 aa39.26■■■■□ 3.88
SCARA3-202ENST00000337221 YTHDC1Q96MU7 727 aaKnown RBP39.26■■■■□ 3.88
SCARA3-202ENST00000337221 CAMSAP1Q5T5Y3 1602 aa39.26■■■■□ 3.88
SCARA3-202ENST00000337221 LAMC1P11047 1609 aa39.26■■■■□ 3.87
SCARA3-202ENST00000337221 KIF7Q2M1P5 1343 aa39.25■■■■□ 3.87
SCARA3-202ENST00000337221 WASHC2CQ9Y4E1 1318 aa39.25■■■■□ 3.87
SCARA3-202ENST00000337221 CENPBP07199 599 aaPredicted RBP39.23■■■■□ 3.87
SCARA3-202ENST00000337221 KIF1BO60333 1816 aa39.23■■■■□ 3.87
SCARA3-202ENST00000337221 MADDQ8WXG6 1647 aa39.22■■■■□ 3.87
SCARA3-202ENST00000337221 ZC3H13Q5T200 1668 aaKnown RBP39.22■■■■□ 3.87
SCARA3-202ENST00000337221 CNTLNQ9NXG0 1405 aa39.21■■■■□ 3.87
SCARA3-202ENST00000337221 ANP32CO43423 234 aa39.2■■■■□ 3.87
SCARA3-202ENST00000337221 REREQ9P2R6 1566 aa39.19■■■■□ 3.86
SCARA3-202ENST00000337221 STAC3Q96MF2 364 aa39.19■■■■□ 3.86
SCARA3-202ENST00000337221 NBPF1Q3BBV0 1214 aa39.18■■■■□ 3.86
SCARA3-202ENST00000337221 COL17A1Q9UMD9 1497 aaPredicted RBP39.16■■■■□ 3.86
SCARA3-202ENST00000337221 CFAP65Q6ZU64 1925 aaKnown RBP39.15■■■■□ 3.86
SCARA3-202ENST00000337221 MROH2AA6NES4 1674 aa39.13■■■■□ 3.86
SCARA3-202ENST00000337221 SIGLEC1Q9BZZ2 1709 aa39.13■■■■□ 3.85
SCARA3-202ENST00000337221 ARHGAP31Q2M1Z3 1444 aa39.12■■■■□ 3.85
SCARA3-202ENST00000337221 ST20-MTHFSA0A0A6YYL1 179 aa39.12■■■■□ 3.85
SCARA3-202ENST00000337221 ARID4BQ4LE39 1312 aaPredicted RBP39.11■■■■□ 3.85
SCARA3-202ENST00000337221 NOS1P29475 1434 aa39.1■■■■□ 3.85
SCARA3-202ENST00000337221 ADGRB3O60242 1522 aa39.1■■■■□ 3.85
SCARA3-202ENST00000337221 AGLP35573 1532 aa39.1■■■■□ 3.85
SCARA3-202ENST00000337221 IFT172Q9UG01 1749 aa39.09■■■■□ 3.85
SCARA3-202ENST00000337221 CCER2I3L3R5 266 aa39.08■■■■□ 3.85
SCARA3-202ENST00000337221 MYOM2P54296 1465 aa39.06■■■■□ 3.84
SCARA3-202ENST00000337221 ARHGEF40Q8TER5 1519 aa39.03■■■■□ 3.84
SCARA3-202ENST00000337221 SYNMO15061 1565 aa39.02■■■■□ 3.84
SCARA3-202ENST00000337221 PIK3C2BO00750 1634 aa39.02■■■■□ 3.84
SCARA3-202ENST00000337221 KIAA1210Q9ULL0 1709 aa39.01■■■■□ 3.84
SCARA3-202ENST00000337221 IQGAP1P46940 1657 aa38.96■■■■□ 3.83
SCARA3-202ENST00000337221 NRXN1Q9ULB1 1477 aa38.94■■■■□ 3.82
SCARA3-202ENST00000337221 PREX1Q8TCU6 1659 aa38.92■■■■□ 3.82
SCARA3-202ENST00000337221 PPLO60437 1756 aa38.91■■■■□ 3.82
SCARA3-202ENST00000337221 PPP6R1Q9UPN7 881 aa38.9■■■■□ 3.82
SCARA3-202ENST00000337221 ADGRF5Q8IZF2 1346 aa38.9■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms