RNA–Protein interactions for RNA: ENST00000337221.8

SCARA3-202, Transcript of scavenger receptor class A member 3, humanhuman

TSL 1 (best) BASIC

Gene SCARA3, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-202ENST00000337221 UPF1Q92900 1129 aaKnown RBP eCLIP32.1■■■□□ 2.731e-11■■□□□ 13
SCARA3-202ENST00000337221 AGGF1Q8N302 714 aaeCLIP28.91■■■□□ 2.227e-9■■■■□ 19.9
SCARA3-202ENST00000337221 HNRNPLP14866 589 aaKnown RBP eCLIP27.85■■■□□ 2.052e-8■■□□□ 13.1
SCARA3-202ENST00000337221 CDC40O60508 579 aaKnown RBP eCLIP25.56■■□□□ 1.684e-8■■■■■ 34.2
SCARA3-202ENST00000337221 DDX3XO00571 662 aaKnown RBP eCLIP30.39■■■□□ 2.461e-7■■■■■ 31.8
SCARA3-202ENST00000337221 GTF2F1P35269 517 aaKnown RBP eCLIP30.78■■■□□ 2.523e-7■■■■□ 22.3
SCARA3-202ENST00000337221 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.92■■■□□ 2.063e-6■■■■□ 20.9
Retrieved 7 of 7 RNA–protein pairs in 2.2 ms