RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 FAM135AQ9P2D6 1515 aa24.13■■□□□ 1.45
IFFO1-201ENST00000336604 NUDCQ9Y266 331 aa24.12■■□□□ 1.45
IFFO1-201ENST00000336604 FANCIQ9NVI1 1328 aa24.11■■□□□ 1.45
IFFO1-201ENST00000336604 CDC42BPBQ9Y5S2 1711 aa24.1■■□□□ 1.45
IFFO1-201ENST00000336604 RGL3Q3MIN7 710 aa24.08■■□□□ 1.45
IFFO1-201ENST00000336604 PREX2Q70Z35 1606 aa24.08■■□□□ 1.45
IFFO1-201ENST00000336604 CCDC144AA2RUR9 1427 aa24.07■■□□□ 1.44
IFFO1-201ENST00000336604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.07■■□□□ 1.447e-8■■■■■ 29
IFFO1-201ENST00000336604 SYCP2Q9BX26 1530 aa24.06■■□□□ 1.44
IFFO1-201ENST00000336604 RSPH4AQ5TD94 716 aa24.06■■□□□ 1.44
IFFO1-201ENST00000336604 NBPF1Q3BBV0 1214 aa24.04■■□□□ 1.44
IFFO1-201ENST00000336604 PRAG1Q86YV5 1406 aa24.03■■□□□ 1.44
IFFO1-201ENST00000336604 MYBBP1AQ9BQG0 1328 aaKnown RBP24.03■■□□□ 1.44
IFFO1-201ENST00000336604 ARHGAP5Q13017 1502 aa24.02■■□□□ 1.44
IFFO1-201ENST00000336604 RNF123Q5XPI4 1314 aa24.02■■□□□ 1.44
IFFO1-201ENST00000336604 TTC37Q6PGP7 1564 aa24.02■■□□□ 1.43
IFFO1-201ENST00000336604 PLA2R1Q13018 1463 aa24.01■■□□□ 1.43
IFFO1-201ENST00000336604 LRPPRCP42704 1394 aaKnown RBP24■■□□□ 1.43
IFFO1-201ENST00000336604 RALBP1Q15311 655 aa24■■□□□ 1.43
IFFO1-201ENST00000336604 BRD4O60885 1362 aaPredicted RBP24■■□□□ 1.43
IFFO1-201ENST00000336604 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.98■■□□□ 1.43
IFFO1-201ENST00000336604 TRPM1Q7Z4N2 1603 aa23.97■■□□□ 1.43
IFFO1-201ENST00000336604 KTN1Q86UP2 1357 aaKnown RBP23.97■■□□□ 1.43
IFFO1-201ENST00000336604 E9PCH4 1651 aa23.96■■□□□ 1.43
IFFO1-201ENST00000336604 PLEKHH2Q8IVE3 1493 aa23.96■■□□□ 1.43
IFFO1-201ENST00000336604 A2MP01023 1474 aa23.95■■□□□ 1.42
IFFO1-201ENST00000336604 CCDC136Q96JN2 1154 aa23.94■■□□□ 1.42
IFFO1-201ENST00000336604 UNC13BO14795 1591 aa23.93■■□□□ 1.42
IFFO1-201ENST00000336604 CHD1O14646 1710 aa23.92■■□□□ 1.42
IFFO1-201ENST00000336604 MAST1Q9Y2H9 1570 aa23.92■■□□□ 1.42
IFFO1-201ENST00000336604 SALL2Q9Y467 1007 aaPredicted RBP23.92■■□□□ 1.42
IFFO1-201ENST00000336604 PER1O15534 1290 aaPredicted RBP23.91■■□□□ 1.42
IFFO1-201ENST00000336604 NLRP13Q86W25 1043 aa23.91■■□□□ 1.42
IFFO1-201ENST00000336604 ERCC6L2Q5T890 1561 aa23.91■■□□□ 1.42
IFFO1-201ENST00000336604 GPRASP1Q5JY77 1395 aa23.91■■□□□ 1.42
IFFO1-201ENST00000336604 PARD3Q8TEW0 1356 aa23.91■■□□□ 1.42
IFFO1-201ENST00000336604 DEKP35659 375 aaKnown RBP23.89■■□□□ 1.41
IFFO1-201ENST00000336604 TESK2Q96S53 571 aa23.89■■□□□ 1.41
IFFO1-201ENST00000336604 DISP3Q9P2K9 1392 aa23.89■■□□□ 1.41
IFFO1-201ENST00000336604 ABCC2Q92887 1545 aa23.86■■□□□ 1.41
IFFO1-201ENST00000336604 PLXNC1O60486 1568 aa23.86■■□□□ 1.41
IFFO1-201ENST00000336604 CC2D1BQ5T0F9 858 aaKnown RBP23.86■■□□□ 1.41
IFFO1-201ENST00000336604 IQGAP3Q86VI3 1631 aa23.86■■□□□ 1.41
IFFO1-201ENST00000336604 SHROOM2Q13796 1616 aa23.86■■□□□ 1.41
IFFO1-201ENST00000336604 COL17A1Q9UMD9 1497 aaPredicted RBP23.86■■□□□ 1.41
IFFO1-201ENST00000336604 MYO5CQ9NQX4 1742 aa23.85■■□□□ 1.41
IFFO1-201ENST00000336604 PRDM15P57071 1507 aaPredicted RBP23.84■■□□□ 1.41
IFFO1-201ENST00000336604 DUOX2Q9NRD8 1548 aa23.83■■□□□ 1.4
IFFO1-201ENST00000336604 PANK3Q9H999 370 aa23.82■■□□□ 1.4
IFFO1-201ENST00000336604 NBR1Q14596 966 aa23.81■■□□□ 1.4
IFFO1-201ENST00000336604 ERBINQ96RT1 1412 aa23.81■■□□□ 1.4
IFFO1-201ENST00000336604 RRP1P56182 461 aaKnown RBP23.8■■□□□ 1.4
IFFO1-201ENST00000336604 ATP10AO60312 1499 aa23.79■■□□□ 1.4
IFFO1-201ENST00000336604 MAGI2Q86UL8 1455 aa23.79■■□□□ 1.4
IFFO1-201ENST00000336604 RCAN3Q9UKA8 241 aa23.78■■□□□ 1.4
IFFO1-201ENST00000336604 PLCH2O75038 1416 aa23.78■■□□□ 1.4
IFFO1-201ENST00000336604 TMF1P82094 1093 aa23.77■■□□□ 1.4
IFFO1-201ENST00000336604 LAMC1P11047 1609 aa23.77■■□□□ 1.4
IFFO1-201ENST00000336604 EFCAB2Q5VUJ9 269 aa23.77■■□□□ 1.4
IFFO1-201ENST00000336604 CDCA7LQ96GN5 454 aa23.77■■□□□ 1.39
IFFO1-201ENST00000336604 TRAPPC8Q9Y2L5 1435 aa23.76■■□□□ 1.39
IFFO1-201ENST00000336604 EIF2AK4Q9P2K8 1649 aaKnown RBP23.75■■□□□ 1.39
IFFO1-201ENST00000336604 WASHC2CQ9Y4E1 1318 aa23.75■■□□□ 1.39
IFFO1-201ENST00000336604 EXOC6Q8TAG9 804 aa23.75■■□□□ 1.39
IFFO1-201ENST00000336604 MYT1LQ9UL68 1186 aa23.74■■□□□ 1.39
IFFO1-201ENST00000336604 PDE3BQ13370 1112 aa23.72■■□□□ 1.39
IFFO1-201ENST00000336604 AFAP1Q8N556 730 aa23.7■■□□□ 1.39
IFFO1-201ENST00000336604 ABCC1P33527 1531 aa23.7■■□□□ 1.38
IFFO1-201ENST00000336604 ZCCHC11Q5TAX3 1644 aaKnown RBP23.7■■□□□ 1.38
IFFO1-201ENST00000336604 PAK3O75914 559 aaPredicted RBP23.69■■□□□ 1.38
IFFO1-201ENST00000336604 NOP58Q9Y2X3 529 aaKnown RBP23.69■■□□□ 1.38
IFFO1-201ENST00000336604 SPAG9O60271 1321 aaKnown RBP23.67■■□□□ 1.38
IFFO1-201ENST00000336604 RNF17Q9BXT8 1623 aaKnown RBP23.66■■□□□ 1.38
IFFO1-201ENST00000336604 BLMP54132 1417 aaPredicted RBP23.66■■□□□ 1.38
IFFO1-201ENST00000336604 WDR7Q9Y4E6 1490 aa23.63■■□□□ 1.37
IFFO1-201ENST00000336604 PLIN1O60240 522 aa23.63■■□□□ 1.37
IFFO1-201ENST00000336604 ADAMTS8Q9UP79 889 aa23.62■■□□□ 1.37
IFFO1-201ENST00000336604 MADDQ8WXG6 1647 aa23.61■■□□□ 1.37
IFFO1-201ENST00000336604 KNSTRNQ9Y448 316 aa23.61■■□□□ 1.37
IFFO1-201ENST00000336604 UHRF1BP1LA0JNW5 1464 aa23.6■■□□□ 1.37
IFFO1-201ENST00000336604 ANP32AP39687 249 aaKnown RBP23.6■■□□□ 1.37
IFFO1-201ENST00000336604 PRKCSHP14314 528 aaPredicted RBP23.59■■□□□ 1.37
IFFO1-201ENST00000336604 INSRP06213 1382 aa23.59■■□□□ 1.37
IFFO1-201ENST00000336604 TRPM2O94759 1503 aa23.58■■□□□ 1.37
IFFO1-201ENST00000336604 ZFYVE16Q7Z3T8 1539 aa23.58■■□□□ 1.37
IFFO1-201ENST00000336604 ZMYM4Q5VZL5 1548 aa23.58■■□□□ 1.36
IFFO1-201ENST00000336604 PPP2R1AP30153 589 aa23.57■■□□□ 1.36
IFFO1-201ENST00000336604 AMER1Q5JTC6 1135 aaPredicted RBP23.56■■□□□ 1.36
IFFO1-201ENST00000336604 IPO9Q96P70 1041 aaKnown RBP23.56■■□□□ 1.36
IFFO1-201ENST00000336604 RTEL1-TNFRSF6BF6WH68 1400 aa23.56■■□□□ 1.36
IFFO1-201ENST00000336604 CLASP1Q7Z460 1538 aa23.56■■□□□ 1.36
IFFO1-201ENST00000336604 PTPRTO14522 1441 aa23.55■■□□□ 1.36
IFFO1-201ENST00000336604 IQGAP1P46940 1657 aa23.55■■□□□ 1.36
IFFO1-201ENST00000336604 SCAF11Q99590 1463 aaKnown RBP23.55■■□□□ 1.36
IFFO1-201ENST00000336604 CLTCL1P53675 1640 aa23.54■■□□□ 1.36
IFFO1-201ENST00000336604 SPHKAPQ2M3C7 1700 aa23.52■■□□□ 1.36
IFFO1-201ENST00000336604 TCERG1O14776 1098 aaKnown RBP23.51■■□□□ 1.35
IFFO1-201ENST00000336604 KIF3BO15066 747 aa23.51■■□□□ 1.35
IFFO1-201ENST00000336604 WDR43Q15061 677 aaKnown RBP eCLIP23.51■■□□□ 1.35
IFFO1-201ENST00000336604 CDCA8Q53HL2 280 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms