RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 CLASP1Q7Z460 1538 aa28.07■■■□□ 2.08
LINC01006-201ENST00000333319 PLXNC1O60486 1568 aa28.07■■■□□ 2.08
LINC01006-201ENST00000333319 ZCCHC11Q5TAX3 1644 aaKnown RBP28.07■■■□□ 2.08
LINC01006-201ENST00000333319 CNGB1Q14028 1251 aaPredicted RBP28.06■■■□□ 2.08
LINC01006-201ENST00000333319 ST20-MTHFSA0A0A6YYL1 179 aa28.05■■■□□ 2.08
LINC01006-201ENST00000333319 PLCH2O75038 1416 aa28.05■■■□□ 2.08
LINC01006-201ENST00000333319 ROCK2O75116 1388 aaKnown RBP28.03■■■□□ 2.08
LINC01006-201ENST00000333319 UHRF1BP1LA0JNW5 1464 aa28.02■■■□□ 2.08
LINC01006-201ENST00000333319 EFCAB2Q5VUJ9 269 aa28.02■■■□□ 2.08
LINC01006-201ENST00000333319 PLA2R1Q13018 1463 aa28.01■■■□□ 2.07
LINC01006-201ENST00000333319 ZBED9Q6R2W3 1325 aa28.01■■■□□ 2.07
LINC01006-201ENST00000333319 DUOX2Q9NRD8 1548 aa28.01■■■□□ 2.07
LINC01006-201ENST00000333319 RGL3Q3MIN7 710 aa28.01■■■□□ 2.07
LINC01006-201ENST00000333319 IQGAP3Q86VI3 1631 aa27.99■■■□□ 2.07
LINC01006-201ENST00000333319 PRAG1Q86YV5 1406 aa27.98■■■□□ 2.07
LINC01006-201ENST00000333319 IRX6P78412 446 aaPredicted RBP27.97■■■□□ 2.07
LINC01006-201ENST00000333319 ERBINQ96RT1 1412 aa27.95■■■□□ 2.06
LINC01006-201ENST00000333319 TRPM1Q7Z4N2 1603 aa27.94■■■□□ 2.06
LINC01006-201ENST00000333319 ABCC1P33527 1531 aa27.93■■■□□ 2.06
LINC01006-201ENST00000333319 TRAPPC8Q9Y2L5 1435 aa27.92■■■□□ 2.06
LINC01006-201ENST00000333319 A2MP01023 1474 aa27.91■■■□□ 2.06
LINC01006-201ENST00000333319 MAGI2Q86UL8 1455 aa27.91■■■□□ 2.06
LINC01006-201ENST00000333319 NBPF1Q3BBV0 1214 aa27.9■■■□□ 2.06
LINC01006-201ENST00000333319 ATP10AO60312 1499 aa27.86■■■□□ 2.05
LINC01006-201ENST00000333319 GPRASP1Q5JY77 1395 aa27.84■■■□□ 2.05
LINC01006-201ENST00000333319 SPAG9O60271 1321 aaKnown RBP27.84■■■□□ 2.05
LINC01006-201ENST00000333319 AFAP1Q8N556 730 aa27.83■■■□□ 2.05
LINC01006-201ENST00000333319 TMC1Q8TDI8 760 aa27.83■■■□□ 2.04
LINC01006-201ENST00000333319 E9PCH4 1651 aa27.82■■■□□ 2.04
LINC01006-201ENST00000333319 ERICH6BQ5W0A0 696 aa27.81■■■□□ 2.04
LINC01006-201ENST00000333319 PNISRQ8TF01 805 aaKnown RBP27.81■■■□□ 2.04
LINC01006-201ENST00000333319 ARAP3Q8WWN8 1544 aa27.79■■■□□ 2.04
LINC01006-201ENST00000333319 RTEL1-TNFRSF6BF6WH68 1400 aa27.78■■■□□ 2.04
LINC01006-201ENST00000333319 RALBP1Q15311 655 aa27.77■■■□□ 2.04
LINC01006-201ENST00000333319 LAMC1P11047 1609 aa27.77■■■□□ 2.04
LINC01006-201ENST00000333319 KTN1Q86UP2 1357 aaKnown RBP27.77■■■□□ 2.04
LINC01006-201ENST00000333319 EIF2AK4Q9P2K8 1649 aaKnown RBP27.76■■■□□ 2.04
LINC01006-201ENST00000333319 PRDM15P57071 1507 aaPredicted RBP27.76■■■□□ 2.03
LINC01006-201ENST00000333319 MYBBP1AQ9BQG0 1328 aaKnown RBP27.76■■■□□ 2.03
LINC01006-201ENST00000333319 WDR7Q9Y4E6 1490 aa27.75■■■□□ 2.03
LINC01006-201ENST00000333319 ZFYVE16Q7Z3T8 1539 aa27.75■■■□□ 2.03
LINC01006-201ENST00000333319 PPP4R2Q9NY27 417 aa27.73■■■□□ 2.03
LINC01006-201ENST00000333319 SMG6Q86US8 1419 aaKnown RBP27.72■■■□□ 2.03
LINC01006-201ENST00000333319 BRD4O60885 1362 aaPredicted RBP27.72■■■□□ 2.03
LINC01006-201ENST00000333319 TESK2Q96S53 571 aa27.72■■■□□ 2.03
LINC01006-201ENST00000333319 COL17A1Q9UMD9 1497 aaPredicted RBP27.71■■■□□ 2.03
LINC01006-201ENST00000333319 RBM19Q9Y4C8 960 aaKnown RBP27.7■■■□□ 2.02
LINC01006-201ENST00000333319 FANCAO15360 1455 aa27.7■■■□□ 2.02
LINC01006-201ENST00000333319 DISP3Q9P2K9 1392 aa27.69■■■□□ 2.02
LINC01006-201ENST00000333319 SENP3-EIF4A1A0A087X0R7 540 aa27.69■■■□□ 2.02
LINC01006-201ENST00000333319 NUDCQ9Y266 331 aa27.68■■■□□ 2.02
LINC01006-201ENST00000333319 LRPPRCP42704 1394 aaKnown RBP27.67■■■□□ 2.02
LINC01006-201ENST00000333319 ABCA9Q8IUA7 1624 aa27.67■■■□□ 2.02
LINC01006-201ENST00000333319 PER1O15534 1290 aaPredicted RBP27.66■■■□□ 2.02
LINC01006-201ENST00000333319 ATP7AQ04656 1500 aa27.65■■■□□ 2.02
LINC01006-201ENST00000333319 PARD3Q8TEW0 1356 aa27.64■■■□□ 2.02
LINC01006-201ENST00000333319 DEPDC5O75140 1603 aa27.64■■■□□ 2.01
LINC01006-201ENST00000333319 TRPM2O94759 1503 aa27.64■■■□□ 2.01
LINC01006-201ENST00000333319 MYT1LQ9UL68 1186 aa27.64■■■□□ 2.01
LINC01006-201ENST00000333319 TMF1P82094 1093 aa27.63■■■□□ 2.01
LINC01006-201ENST00000333319 RNF17Q9BXT8 1623 aaKnown RBP27.63■■■□□ 2.01
LINC01006-201ENST00000333319 INO80Q9ULG1 1556 aaPredicted RBP27.62■■■□□ 2.01
LINC01006-201ENST00000333319 NLRP13Q86W25 1043 aa27.62■■■□□ 2.01
LINC01006-201ENST00000333319 SPHKAPQ2M3C7 1700 aa27.61■■■□□ 2.01
LINC01006-201ENST00000333319 PTPRTO14522 1441 aa27.61■■■□□ 2.01
LINC01006-201ENST00000333319 SCAPERQ9BY12 1400 aa27.6■■■□□ 2.01
LINC01006-201ENST00000333319 ADGRL1O94910 1474 aa27.6■■■□□ 2.01
LINC01006-201ENST00000333319 KANK1Q14678 1352 aa27.6■■■□□ 2.01
LINC01006-201ENST00000333319 KIF3BO15066 747 aa27.59■■■□□ 2.01
LINC01006-201ENST00000333319 MYT1Q01538 1121 aa27.59■■■□□ 2.01
LINC01006-201ENST00000333319 MADDQ8WXG6 1647 aa27.59■■■□□ 2.01
LINC01006-201ENST00000333319 CEP152O94986 1710 aa27.59■■■□□ 2.01
LINC01006-201ENST00000333319 PANK3Q9H999 370 aa27.58■■■□□ 2.01
LINC01006-201ENST00000333319 TET3O43151 1660 aa27.58■■■□□ 2.01
LINC01006-201ENST00000333319 ASXL2Q76L83 1435 aa27.58■■■□□ 2.01
LINC01006-201ENST00000333319 B4GALNT3Q6L9W6 998 aa27.57■■■□□ 2
LINC01006-201ENST00000333319 CLTCL1P53675 1640 aa27.57■■■□□ 2
LINC01006-201ENST00000333319 WASHC2CQ9Y4E1 1318 aa27.56■■■□□ 2
LINC01006-201ENST00000333319 CC2D1BQ5T0F9 858 aaKnown RBP27.56■■■□□ 2
LINC01006-201ENST00000333319 VWDEQ8N2E2 1590 aa27.54■■■□□ 2
LINC01006-201ENST00000333319 RNF123Q5XPI4 1314 aa27.53■■■□□ 2
LINC01006-201ENST00000333319 STAC3Q96MF2 364 aa27.53■■■□□ 2
LINC01006-201ENST00000333319 IQGAP1P46940 1657 aa27.5■■□□□ 1.99
LINC01006-201ENST00000333319 MROH1Q8NDA8 1641 aa27.46■■□□□ 1.99
LINC01006-201ENST00000333319 SCAF11Q99590 1463 aaKnown RBP27.46■■□□□ 1.99
LINC01006-201ENST00000333319 SALL2Q9Y467 1007 aaPredicted RBP27.44■■□□□ 1.98
LINC01006-201ENST00000333319 NPM1P06748 294 aaKnown RBP eCLIP27.43■■□□□ 1.98
LINC01006-201ENST00000333319 KIDINS220Q9ULH0 1771 aa27.43■■□□□ 1.98
LINC01006-201ENST00000333319 UGGT1Q9NYU2 1555 aa27.4■■□□□ 1.98
LINC01006-201ENST00000333319 CDCA8Q53HL2 280 aa27.39■■□□□ 1.98
LINC01006-201ENST00000333319 ZNF518AQ6AHZ1 1483 aa27.39■■□□□ 1.97
LINC01006-201ENST00000333319 OSCARQ8IYS5 282 aa27.38■■□□□ 1.97
LINC01006-201ENST00000333319 NEURL4Q96JN8 1562 aa27.38■■□□□ 1.97
LINC01006-201ENST00000333319 KNSTRNQ9Y448 316 aa27.38■■□□□ 1.97
LINC01006-201ENST00000333319 EFCAB6Q5THR3 1501 aa27.36■■□□□ 1.97
LINC01006-201ENST00000333319 ANP32EQ9BTT0 268 aa27.36■■□□□ 1.97
LINC01006-201ENST00000333319 KIAA1210Q9ULL0 1709 aa27.36■■□□□ 1.97
LINC01006-201ENST00000333319 EIF3AQ14152 1382 aaKnown RBP27.36■■□□□ 1.97
LINC01006-201ENST00000333319 PDE3BQ13370 1112 aa27.36■■□□□ 1.97
LINC01006-201ENST00000333319 KIF1BO60333 1816 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms