RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 TRIM52Q96A61 297 aa27.84■■■□□ 2.05
TSSC4-201ENST00000333256 BCORL1Q5H9F3 1711 aa27.81■■■□□ 2.04
TSSC4-201ENST00000333256 MROH1Q8NDA8 1641 aa27.8■■■□□ 2.04
TSSC4-201ENST00000333256 RNF17Q9BXT8 1623 aaKnown RBP27.79■■■□□ 2.04
TSSC4-201ENST00000333256 NUP155O75694 1391 aa27.79■■■□□ 2.04
TSSC4-201ENST00000333256 UNC13BO14795 1591 aa27.77■■■□□ 2.04
TSSC4-201ENST00000333256 DEPDC5O75140 1603 aa27.77■■■□□ 2.04
TSSC4-201ENST00000333256 PRDM15P57071 1507 aaPredicted RBP27.75■■■□□ 2.03
TSSC4-201ENST00000333256 HRCP23327 699 aa27.75■■■□□ 2.03
TSSC4-201ENST00000333256 KANK1Q14678 1352 aa27.73■■■□□ 2.03
TSSC4-201ENST00000333256 WASHC2CQ9Y4E1 1318 aa27.72■■■□□ 2.03
TSSC4-201ENST00000333256 VWDEQ8N2E2 1590 aa27.68■■■□□ 2.02
TSSC4-201ENST00000333256 FAM135AQ9P2D6 1515 aa27.68■■■□□ 2.02
TSSC4-201ENST00000333256 ESF1Q9H501 851 aaKnown RBP27.68■■■□□ 2.02
TSSC4-201ENST00000333256 PZPP20742 1482 aa27.67■■■□□ 2.02
TSSC4-201ENST00000333256 SLC4A1APQ9BWU0 796 aaKnown RBP27.67■■■□□ 2.02
TSSC4-201ENST00000333256 ABCC3O15438 1527 aa27.66■■■□□ 2.02
TSSC4-201ENST00000333256 KDM5DQ9BY66 1539 aa27.66■■■□□ 2.02
TSSC4-201ENST00000333256 PPP6R1Q9UPN7 881 aa27.65■■■□□ 2.02
TSSC4-201ENST00000333256 CEP152O94986 1710 aa27.65■■■□□ 2.02
TSSC4-201ENST00000333256 IQGAP3Q86VI3 1631 aa27.65■■■□□ 2.02
TSSC4-201ENST00000333256 MPHOSPH9Q99550 1183 aa27.65■■■□□ 2.02
TSSC4-201ENST00000333256 ACIN1Q9UKV3 1341 aaKnown RBP27.63■■■□□ 2.01
TSSC4-201ENST00000333256 CLTCQ00610 1675 aaKnown RBP27.62■■■□□ 2.01
TSSC4-201ENST00000333256 MADDQ8WXG6 1647 aa27.62■■■□□ 2.01
TSSC4-201ENST00000333256 ADAMTSL3P82987 1691 aa27.6■■■□□ 2.01
TSSC4-201ENST00000333256 FOXD1Q16676 465 aa27.6■■■□□ 2.01
TSSC4-201ENST00000333256 FER1L4A9Z1Z3 1794 aa27.6■■■□□ 2.01
TSSC4-201ENST00000333256 LMTK2Q8IWU2 1503 aa27.59■■■□□ 2.01
TSSC4-201ENST00000333256 PKD2Q13563 968 aa27.59■■■□□ 2.01
TSSC4-201ENST00000333256 ZC3H13Q5T200 1668 aaKnown RBP27.58■■■□□ 2.01
TSSC4-201ENST00000333256 PLPPR3Q6T4P5 718 aa27.58■■■□□ 2.01
TSSC4-201ENST00000333256 CAMSAP1Q5T5Y3 1602 aa27.56■■■□□ 2
TSSC4-201ENST00000333256 DHX57Q6P158 1386 aaKnown RBP27.56■■■□□ 2
TSSC4-201ENST00000333256 CNTLNQ9NXG0 1405 aa27.56■■■□□ 2
TSSC4-201ENST00000333256 TET3O43151 1660 aa27.56■■■□□ 2
TSSC4-201ENST00000333256 ZMYM3Q14202 1370 aa27.56■■■□□ 2
TSSC4-201ENST00000333256 EFCAB6Q5THR3 1501 aa27.55■■■□□ 2
TSSC4-201ENST00000333256 KDM4FA0A1W2PPD8 638 aa27.55■■■□□ 2
TSSC4-201ENST00000333256 CEBPAP49715 358 aaPredicted RBP27.55■■■□□ 2
TSSC4-201ENST00000333256 RIMS1Q86UR5 1692 aaKnown RBP27.55■■■□□ 2
TSSC4-201ENST00000333256 NPATQ14207 1427 aa27.54■■■□□ 2
TSSC4-201ENST00000333256 FBXO31Q5XUX0 539 aaPredicted RBP27.51■■□□□ 1.99
TSSC4-201ENST00000333256 E9PCH4 1651 aa27.5■■□□□ 1.99
TSSC4-201ENST00000333256 ARHGAP31Q2M1Z3 1444 aa27.48■■□□□ 1.99
TSSC4-201ENST00000333256 MROH2AA6NES4 1674 aa27.47■■□□□ 1.99
TSSC4-201ENST00000333256 PTPRMP28827 1452 aa27.44■■□□□ 1.98
TSSC4-201ENST00000333256 C3P01024 1663 aa27.44■■□□□ 1.98
TSSC4-201ENST00000333256 RPRD2Q5VT52 1461 aaKnown RBP27.44■■□□□ 1.98
TSSC4-201ENST00000333256 CFAP65Q6ZU64 1925 aaKnown RBP27.43■■□□□ 1.98
TSSC4-201ENST00000333256 CCER1Q8TC90 406 aaPredicted RBP27.43■■□□□ 1.98
TSSC4-201ENST00000333256 ERVK-7P63135 1459 aa27.4■■□□□ 1.98
TSSC4-201ENST00000333256 PLA2R1Q13018 1463 aa27.4■■□□□ 1.98
TSSC4-201ENST00000333256 PREX1Q8TCU6 1659 aa27.38■■□□□ 1.97
TSSC4-201ENST00000333256 ANKRD30BQ9BXX2 1392 aa27.37■■□□□ 1.97
TSSC4-201ENST00000333256 NOS1P29475 1434 aa27.37■■□□□ 1.97
TSSC4-201ENST00000333256 PTPRTO14522 1441 aa27.36■■□□□ 1.97
TSSC4-201ENST00000333256 SPATA31D1Q6ZQQ2 1576 aa27.35■■□□□ 1.97
TSSC4-201ENST00000333256 UGGT1Q9NYU2 1555 aa27.34■■□□□ 1.97
TSSC4-201ENST00000333256 SPHKAPQ2M3C7 1700 aa27.34■■□□□ 1.97
TSSC4-201ENST00000333256 SYNMO15061 1565 aa27.33■■□□□ 1.97
TSSC4-201ENST00000333256 TNRQ92752 1358 aa27.33■■□□□ 1.97
TSSC4-201ENST00000333256 TRPM2O94759 1503 aa27.31■■□□□ 1.96
TSSC4-201ENST00000333256 SIN3AQ96ST3 1273 aa27.3■■□□□ 1.96
TSSC4-201ENST00000333256 CCDC144AA2RUR9 1427 aa27.28■■□□□ 1.96
TSSC4-201ENST00000333256 IDI1Q13907 227 aa27.27■■□□□ 1.96
TSSC4-201ENST00000333256 NEUROD1Q13562 356 aa27.26■■□□□ 1.95
TSSC4-201ENST00000333256 CLTCL1P53675 1640 aa27.26■■□□□ 1.95
TSSC4-201ENST00000333256 SLC52A1Q9NWF4 448 aa27.24■■□□□ 1.95
TSSC4-201ENST00000333256 CHGAP10645 457 aaKnown RBP27.23■■□□□ 1.95
TSSC4-201ENST00000333256 PIK3C2BO00750 1634 aa27.21■■□□□ 1.95
TSSC4-201ENST00000333256 CLSPNQ9HAW4 1339 aa27.2■■□□□ 1.94
TSSC4-201ENST00000333256 MYO3AQ8NEV4 1616 aa27.19■■□□□ 1.94
TSSC4-201ENST00000333256 NLRP1Q9C000 1473 aa27.17■■□□□ 1.94
TSSC4-201ENST00000333256 STAG3Q9UJ98 1225 aa27.17■■□□□ 1.94
TSSC4-201ENST00000333256 RGL3Q3MIN7 710 aa27.15■■□□□ 1.94
TSSC4-201ENST00000333256 UHRF1BP1Q6BDS2 1440 aa27.13■■□□□ 1.93
TSSC4-201ENST00000333256 SETD1BQ9UPS6 1966 aaKnown RBP27.12■■□□□ 1.93
TSSC4-201ENST00000333256 A2ML1A8K2U0 1454 aa27.12■■□□□ 1.93
TSSC4-201ENST00000333256 CEP170BQ9Y4F5 1589 aaPredicted RBP27.11■■□□□ 1.93
TSSC4-201ENST00000333256 SPATA31E1Q6ZUB1 1445 aa27.11■■□□□ 1.93
TSSC4-201ENST00000333256 ADGRB3O60242 1522 aa27.1■■□□□ 1.93
TSSC4-201ENST00000333256 ZNF326Q5BKZ1 582 aaKnown RBP27.1■■□□□ 1.93
TSSC4-201ENST00000333256 TMEM131LA2VDJ0 1609 aa27.1■■□□□ 1.93
TSSC4-201ENST00000333256 KIF1BO60333 1816 aa27.08■■□□□ 1.93
TSSC4-201ENST00000333256 UBR1Q8IWV7 1749 aa27.06■■□□□ 1.92
TSSC4-201ENST00000333256 MYO5BQ9ULV0 1848 aa27.05■■□□□ 1.92
TSSC4-201ENST00000333256 ZNF142P52746 1687 aaPredicted RBP27.05■■□□□ 1.92
TSSC4-201ENST00000333256 TONSLQ96HA7 1378 aa27.03■■□□□ 1.92
TSSC4-201ENST00000333256 NUTM2DQ5VT03 806 aaPredicted RBP27.03■■□□□ 1.92
TSSC4-201ENST00000333256 THEMISQ8N1K5 641 aaPredicted RBP27.03■■□□□ 1.92
TSSC4-201ENST00000333256 L3MBTL2Q969R5 705 aa27.02■■□□□ 1.92
TSSC4-201ENST00000333256 LMTK3Q96Q04 1460 aa27.01■■□□□ 1.91
TSSC4-201ENST00000333256 HSPA2P54652 639 aa27.01■■□□□ 1.91
TSSC4-201ENST00000333256 DCAF11Q8TEB1 546 aa27■■□□□ 1.91
TSSC4-201ENST00000333256 KDM2AQ9Y2K7 1162 aa26.99■■□□□ 1.91
TSSC4-201ENST00000333256 KDM5AP29375 1690 aaKnown RBP26.99■■□□□ 1.91
TSSC4-201ENST00000333256 AEBP2Q6ZN18 517 aaPredicted RBP26.98■■□□□ 1.91
TSSC4-201ENST00000333256 TMEM2Q9UHN6 1383 aa26.98■■□□□ 1.91
TSSC4-201ENST00000333256 NEURL4Q96JN8 1562 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms